CoV-GLUE Mutation

CoV-GLUE Mutation: ORF = noncoding : CodonNum = 29733

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORF	CodonNum	Mut	ORF1abMut	MutType	RefCodon	MutCodon	AACount	CodonCount	CodonProp	Genome Position
noncoding	29733	C29733-		noncoding	C	-	14123	14123	1	29733-29733
noncoding	29733	C29733T		noncoding	C	T	13472	13472	1	29733-29733
noncoding	29733	C29733A		noncoding	C	A	814	814	1	29733-29733
noncoding	29733	C29733G		noncoding	C	G	58	58	1	29733-29733
noncoding	29733	C29733H		noncoding	C	H	1	1	1	29733-29733
noncoding	29733	C29733V		noncoding	C	V	1	1	1	29733-29733

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORF	CodonNum	Mut	RefCodon	MutCodon	CodonCount	AACount	Lineage	LineageCodonProp
noncoding	29733	C29733-	C	-	14123	14123	All	0.002701
noncoding	29733	C29733T	C	T	13472	13472	All	0.002577
noncoding	29733	C29733-	C	-	3724	3724	B.1.525	0.42141
noncoding	29733	C29733T	C	T	2520	2520	B.1.1.7	0.002256
noncoding	29733	C29733-	C	-	2033	2033	B.1.1.7	0.00182
noncoding	29733	C29733-	C	-	1761	1761	B.1.1.311	0.630731
noncoding	29733	C29733T	C	T	1659	1659	AY.4	0.002582
noncoding	29733	C29733-	C	-	834	834	AY.38	0.416375
noncoding	29733	C29733A	C	A	814	814	All	0.000156
noncoding	29733	C29733T	C	T	693	693	AY.25	0.004168
noncoding	29733	C29733T	C	T	667	667	B.1.617.2	0.002512
noncoding	29733	C29733-	C	-	565	565	AY.4	0.000879
noncoding	29733	C29733T	C	T	536	536	B.1.2	0.00472
noncoding	29733	C29733-	C	-	420	420	B.1.617.2	0.001581
noncoding	29733	C29733T	C	T	396	396	AY.6	0.016287
noncoding	29733	C29733-	C	-	362	362	B.1.351.2	0.109531
noncoding	29733	C29733T	C	T	308	308	AY.111	0.05641
noncoding	29733	C29733-	C	-	287	287	AY.5	0.005926
noncoding	29733	C29733-	C	-	284	284	AY.39	0.007018
noncoding	29733	C29733T	C	T	264	264	AY.44	0.001607
noncoding	29733	C29733T	C	T	246	246	B.1.279	0.126348
noncoding	29733	C29733T	C	T	243	243	B.1.149	0.832192
noncoding	29733	C29733T	C	T	238	238	AY.103	0.001478
noncoding	29733	C29733T	C	T	223	223	B.1.1	0.004045
noncoding	29733	C29733T	C	T	206	206	AY.3	0.002049
noncoding	29733	C29733T	C	T	201	201	AY.43	0.000891
noncoding	29733	C29733T	C	T	199	199	B.1.429	0.004682
noncoding	29733	C29733-	C	-	193	193	B.1.526	0.004536
noncoding	29733	C29733-	C	-	189	189	B.1	0.001731
noncoding	29733	C29733T	C	T	182	182	B.1	0.001667
noncoding	29733	C29733T	C	T	174	174	B.1.1.416	0.157466
noncoding	29733	C29733T	C	T	172	172	B.1.177.86	0.031554
noncoding	29733	C29733T	C	T	169	169	B.1.1.519	0.006711
noncoding	29733	C29733-	C	-	168	168	B.1.177	0.002212
noncoding	29733	C29733T	C	T	165	165	B.1.400	0.070785
noncoding	29733	C29733-	C	-	158	158	AY.103	0.000981
noncoding	29733	C29733T	C	T	154	154	AY.100	0.007085
noncoding	29733	C29733T	C	T	152	152	AY.121	0.020568
noncoding	29733	C29733T	C	T	152	152	AY.46.4	0.025004
noncoding	29733	C29733T	C	T	140	140	B.1.177	0.001843
noncoding	29733	C29733T	C	T	136	136	AY.29	0.002145
noncoding	29733	C29733T	C	T	131	131	B.1.453	0.423948
noncoding	29733	C29733-	C	-	129	129	B.1.1	0.00234
noncoding	29733	C29733A	C	A	125	125	AY.4	0.000195
noncoding	29733	C29733T	C	T	118	118	B.1.177.4	0.024905
noncoding	29733	C29733-	C	-	118	118	B.1.2	0.001039
noncoding	29733	C29733T	C	T	111	111	AY.102	0.002943
noncoding	29733	C29733-	C	-	109	109	AY.120	0.004052
noncoding	29733	C29733-	C	-	109	109	B.1.429	0.002565
noncoding	29733	C29733-	C	-	102	102	AY.25	0.000614
noncoding	29733	C29733T	C	T	102	102	P.1	0.001607
noncoding	29733	C29733-	C	-	101	101	AY.43	0.000447
noncoding	29733	C29733-	C	-	100	100	P.1	0.001575
noncoding	29733	C29733-	C	-	96	96	AY.73	0.063872
noncoding	29733	C29733-	C	-	96	96	B.1.221	0.006819
noncoding	29733	C29733A	C	A	94	94	B.1.617.2	0.000354
noncoding	29733	C29733-	C	-	93	93	AY.47	0.002893
noncoding	29733	C29733A	C	A	88	88	AY.25	0.000529
noncoding	29733	C29733T	C	T	87	87	B.1.1.25	0.04946
noncoding	29733	C29733A	C	A	85	85	AY.118	0.005325
noncoding	29733	C29733-	C	-	85	85	B.1.177.81	0.016092
noncoding	29733	C29733-	C	-	84	84	AY.42	0.003379
noncoding	29733	C29733T	C	T	84	84	C.35	0.065015
noncoding	29733	C29733T	C	T	81	81	B.1.1.284	0.008699
noncoding	29733	C29733T	C	T	77	77	AY.119	0.002719
noncoding	29733	C29733A	C	A	74	74	B.1.1.7	0.000066
noncoding	29733	C29733T	C	T	73	73	B.1.1.351	0.203911
noncoding	29733	C29733-	C	-	70	70	AY.3	0.000696
noncoding	29733	C29733A	C	A	69	69	AY.43	0.000306
noncoding	29733	C29733T	C	T	68	68	B.1.526	0.001598
noncoding	29733	C29733-	C	-	63	63	B.1.1.519	0.002502
noncoding	29733	C29733-	C	-	62	62	B.1.160	0.001934
noncoding	29733	C29733T	C	T	59	59	AY.39	0.001458
noncoding	29733	C29733G	C	G	58	58	All	0.000011
noncoding	29733	C29733-	C	-	51	51	AY.44	0.00031
noncoding	29733	C29733-	C	-	50	50	B.1.243	0.003479
noncoding	29733	C29733T	C	T	49	49	B.1.160	0.001528
noncoding	29733	C29733T	C	T	49	49	B.1.221	0.003481
noncoding	29733	C29733T	C	T	47	47	AY.114	0.010862
noncoding	29733	C29733T	C	T	47	47	AY.42	0.001891
noncoding	29733	C29733-	C	-	46	46	C.16	0.04878
noncoding	29733	C29733T	C	T	44	44	AY.5	0.000909
noncoding	29733	C29733-	C	-	44	44	B.1.177.24	0.056995
noncoding	29733	C29733T	C	T	42	42	AY.47	0.001306
noncoding	29733	C29733T	C	T	42	42	B.1.1.348	0.033439
noncoding	29733	C29733-	C	-	42	42	P.1.16	0.015713
noncoding	29733	C29733T	C	T	41	41	AY.9.2	0.001506
noncoding	29733	C29733-	C	-	41	41	B.1.351	0.001219
noncoding	29733	C29733T	C	T	40	40	AY.118	0.002506
noncoding	29733	C29733T	C	T	40	40	AY.26	0.001132
noncoding	29733	C29733T	C	T	40	40	B.1.416.1	0.0625
noncoding	29733	C29733T	C	T	38	38	B.1.1.39	0.019368
noncoding	29733	C29733T	C	T	37	37	AY.20	0.001438
noncoding	29733	C29733T	C	T	37	37	D.2	0.002777
noncoding	29733	C29733T	C	T	36	36	AY.4.2	0.000781
noncoding	29733	C29733T	C	T	36	36	B.1.1.37	0.006943
noncoding	29733	C29733A	C	A	36	36	B.1.2	0.000317
noncoding	29733	C29733T	C	T	36	36	B.1.351	0.00107
noncoding	29733	C29733-	C	-	35	35	B.1.258	0.002329
noncoding	29733	C29733T	C	T	34	34	B.1.621	0.00301
noncoding	29733	C29733T	C	T	32	32	AY.120	0.00119
noncoding	29733	C29733T	C	T	32	32	AY.23	0.002232
noncoding	29733	C29733T	C	T	32	32	AY.4.2.1	0.004768
noncoding	29733	C29733T	C	T	31	31	AY.9.1	0.002595
noncoding	29733	C29733-	C	-	31	31	R.1	0.00279
noncoding	29733	C29733T	C	T	29	29	B.1.1.222	0.005916
noncoding	29733	C29733T	C	T	28	28	B.1.596	0.00244
noncoding	29733	C29733-	C	-	27	27	AY.26	0.000764
noncoding	29733	C29733-	C	-	27	27	B.1.346	0.035387
noncoding	29733	C29733T	C	T	27	27	C.37	0.003134
noncoding	29733	C29733-	C	-	26	26	AY.100	0.001196
noncoding	29733	C29733-	C	-	25	25	AY.29	0.000394
noncoding	29733	C29733T	C	T	25	25	B.1.177.60	0.005461
noncoding	29733	C29733-	C	-	25	25	B.1.427	0.001262
noncoding	29733	C29733T	C	T	24	24	B.1.1.434	0.008365
noncoding	29733	C29733T	C	T	24	24	B.1.243	0.00167
noncoding	29733	C29733T	C	T	24	24	B.1.36.1	0.027366
noncoding	29733	C29733-	C	-	23	23	AY.4.2	0.000499
noncoding	29733	C29733T	C	T	23	23	B.1.258	0.001531
noncoding	29733	C29733-	C	-	22	22	AY.102	0.000583
noncoding	29733	C29733-	C	-	22	22	B.1.1.368	0.067901
noncoding	29733	C29733A	C	A	22	22	B.1.525	0.00249
noncoding	29733	C29733A	C	A	21	21	AY.103	0.00013
noncoding	29733	C29733T	C	T	21	21	AY.45	0.002555
noncoding	29733	C29733T	C	T	21	21	AY.75.1	0.003787
noncoding	29733	C29733T	C	T	21	21	AY.9	0.001419
noncoding	29733	C29733T	C	T	21	21	B.1.177.15	0.013249
noncoding	29733	C29733-	C	-	21	21	B.1.305	0.045161
noncoding	29733	C29733T	C	T	21	21	B.1.466.2	0.008216
noncoding	29733	C29733-	C	-	21	21	B.1.596	0.00183
noncoding	29733	C29733-	C	-	20	20	B.1.289	0.053191
noncoding	29733	C29733T	C	T	20	20	B.1.427	0.00101
noncoding	29733	C29733-	C	-	20	20	B.1.575	0.006068
noncoding	29733	C29733T	C	T	19	19	AY.75	0.001064
noncoding	29733	C29733-	C	-	19	19	AY.92	0.005458
noncoding	29733	C29733T	C	T	19	19	B.1.177.3	0.145038
noncoding	29733	C29733-	C	-	18	18	AY.20	0.0007
noncoding	29733	C29733T	C	T	18	18	AY.4.5	0.001935
noncoding	29733	C29733T	C	T	18	18	AY.46	0.001873
noncoding	29733	C29733-	C	-	18	18	B.1.1.172	0.327273
noncoding	29733	C29733-	C	-	18	18	B.1.1.222	0.003672
noncoding	29733	C29733-	C	-	18	18	B.1.1.307	0.04557
noncoding	29733	C29733T	C	T	18	18	B.1.177.7	0.002967
noncoding	29733	C29733T	C	T	18	18	B.1.234	0.002375
noncoding	29733	C29733-	C	-	18	18	B.1.404	0.023438
noncoding	29733	C29733-	C	-	18	18	P.1.14	0.00086
noncoding	29733	C29733T	C	T	17	17	AY.116	0.004875
noncoding	29733	C29733A	C	A	17	17	AY.44	0.000103
noncoding	29733	C29733T	C	T	17	17	AY.5.3	0.005735
noncoding	29733	C29733T	C	T	17	17	AY.57	0.011155
noncoding	29733	C29733T	C	T	17	17	AY.99.2	0.001567
noncoding	29733	C29733-	C	-	17	17	B.1.1.265	0.053628
noncoding	29733	C29733T	C	T	17	17	B.1.1.50	0.011541
noncoding	29733	C29733-	C	-	17	17	B.1.621	0.001505
noncoding	29733	C29733-	C	-	16	16	AY.45	0.001947
noncoding	29733	C29733-	C	-	16	16	AY.6	0.000658
noncoding	29733	C29733T	C	T	16	16	AY.69	0.002987
noncoding	29733	C29733T	C	T	16	16	B.1.1.189	0.024206
noncoding	29733	C29733T	C	T	16	16	C.16	0.016967
noncoding	29733	C29733T	C	T	16	16	C.36.3	0.009075
noncoding	29733	C29733T	C	T	15	15	AY.117	0.001268
noncoding	29733	C29733-	C	-	15	15	AY.119	0.00053
noncoding	29733	C29733T	C	T	15	15	AY.27	0.000971
noncoding	29733	C29733A	C	A	15	15	AY.4.2	0.000325
noncoding	29733	C29733T	C	T	15	15	P.1.14	0.000717
noncoding	29733	C29733T	C	T	15	15	P.1.17	0.002426
noncoding	29733	C29733-	C	-	14	14	AY.118	0.000877
noncoding	29733	C29733T	C	T	14	14	AY.3.1	0.001194
noncoding	29733	C29733A	C	A	14	14	B	0.001789
noncoding	29733	C29733T	C	T	14	14	B.1.1.316	0.012951
noncoding	29733	C29733T	C	T	14	14	B.1.36	0.002043
noncoding	29733	C29733-	C	-	14	14	B.1.36	0.002043
noncoding	29733	C29733-	C	-	14	14	B.1.36.1	0.015964
noncoding	29733	C29733-	C	-	14	14	B.1.36.29	0.007243
noncoding	29733	C29733-	C	-	14	14	C.37	0.001625
noncoding	29733	C29733T	C	T	14	14	P.2	0.002613
noncoding	29733	C29733-	C	-	13	13	AY.9.1	0.001088
noncoding	29733	C29733T	C	T	13	13	B.1.416	0.016497
noncoding	29733	C29733T	C	T	13	13	R.1	0.00117
noncoding	29733	C29733A	C	A	12	12	AY.26	0.00034
noncoding	29733	C29733-	C	-	12	12	B.1.1.416	0.01086
noncoding	29733	C29733T	C	T	12	12	B.1.509	0.01039
noncoding	29733	C29733T	C	T	12	12	B.1.617.1	0.001548
noncoding	29733	C29733-	C	-	11	11	AY.117	0.00093
noncoding	29733	C29733A	C	A	11	11	AY.3	0.000109
noncoding	29733	C29733A	C	A	11	11	AY.5	0.000227
noncoding	29733	C29733-	C	-	11	11	AY.74	0.001272
noncoding	29733	C29733T	C	T	11	11	AY.74	0.001272
noncoding	29733	C29733-	C	-	11	11	AY.9.2	0.000404
noncoding	29733	C29733-	C	-	11	11	B.1.1.214	0.00061
noncoding	29733	C29733T	C	T	11	11	B.1.351.2	0.003328
noncoding	29733	C29733T	C	T	11	11	B.1.637	0.000804
noncoding	29733	C29733-	C	-	11	11	P.2	0.002053
noncoding	29733	C29733T	C	T	11	11	Q.1	0.00139
noncoding	29733	C29733T	C	T	10	10	AY.33	0.000668
noncoding	29733	C29733-	C	-	10	10	AY.75	0.00056
noncoding	29733	C29733T	C	T	10	10	AY.84	0.004374
noncoding	29733	C29733-	C	-	10	10	B	0.001278
noncoding	29733	C29733-	C	-	10	10	B.1.1.25	0.005685
noncoding	29733	C29733-	C	-	10	10	B.1.1.279	0.011211
noncoding	29733	C29733-	C	-	10	10	B.1.177.75	0.010406
noncoding	29733	C29733-	C	-	10	10	B.1.258.17	0.00104
noncoding	29733	C29733T	C	T	10	10	B.1.369	0.002852
noncoding	29733	C29733-	C	-	9	9	AY.114	0.00208
noncoding	29733	C29733T	C	T	9	9	AY.16	0.003417
noncoding	29733	C29733A	C	A	9	9	AY.39	0.000222
noncoding	29733	C29733-	C	-	9	9	AY.61	0.000943
noncoding	29733	C29733T	C	T	9	9	AY.98	0.000711
noncoding	29733	C29733T	C	T	9	9	AY.98.1	0.000436
noncoding	29733	C29733T	C	T	9	9	B	0.00115
noncoding	29733	C29733-	C	-	9	9	B.1.1.33	0.003788
noncoding	29733	C29733-	C	-	9	9	B.1.160.14	0.019068
noncoding	29733	C29733-	C	-	9	9	B.1.177.62	0.010727
noncoding	29733	C29733T	C	T	9	9	B.1.258.11	0.003567
noncoding	29733	C29733T	C	T	9	9	B.1.36.29	0.004656
noncoding	29733	C29733-	C	-	9	9	B.1.398	0.026786
noncoding	29733	C29733-	C	-	9	9	B.1.416	0.011421
noncoding	29733	C29733T	C	T	8	8	A.1	0.002255
noncoding	29733	C29733-	C	-	8	8	AY.23	0.000558
noncoding	29733	C29733A	C	A	8	8	AY.46	0.000833
noncoding	29733	C29733-	C	-	8	8	AY.46.4	0.001316
noncoding	29733	C29733-	C	-	8	8	AY.46.5	0.001587
noncoding	29733	C29733-	C	-	8	8	AY.46.6	0.000578
noncoding	29733	C29733T	C	T	8	8	AY.46.6	0.000578
noncoding	29733	C29733-	C	-	8	8	B.1.1.153	0.008762
noncoding	29733	C29733G	C	G	8	8	B.1.1.7	0.000007
noncoding	29733	C29733T	C	T	8	8	B.1.177.44	0.004152
noncoding	29733	C29733-	C	-	8	8	B.1.311	0.002197
noncoding	29733	C29733-	C	-	8	8	B.1.422	0.006499
noncoding	29733	C29733T	C	T	8	8	B.1.595	0.002088
noncoding	29733	C29733-	C	-	8	8	C.36.3	0.004538
noncoding	29733	C29733A	C	A	8	8	C.37	0.000929
noncoding	29733	C29733T	C	T	8	8	P.1.4	0.007812
noncoding	29733	C29733T	C	T	8	8	Q.3	0.00116
noncoding	29733	C29733T	C	T	8	8	Q.8	0.001319
noncoding	29733	C29733T	C	T	7	7	AY.34	0.000679
noncoding	29733	C29733-	C	-	7	7	AY.75.1	0.001262
noncoding	29733	C29733-	C	-	7	7	AY.85	0.00299
noncoding	29733	C29733-	C	-	7	7	B.1.1.39	0.003568
noncoding	29733	C29733-	C	-	7	7	B.1.110.3	0.005029
noncoding	29733	C29733-	C	-	7	7	B.1.160.33	0.030973
noncoding	29733	C29733A	C	A	7	7	B.1.177	0.000092
noncoding	29733	C29733T	C	T	7	7	B.1.177.81	0.001325
noncoding	29733	C29733-	C	-	7	7	B.1.234	0.000924
noncoding	29733	C29733-	C	-	7	7	B.1.240	0.001509
noncoding	29733	C29733-	C	-	7	7	B.1.36.22	0.008454
noncoding	29733	C29733-	C	-	7	7	B.1.499	0.007353
noncoding	29733	C29733T	C	T	7	7	B.1.609	0.003356
noncoding	29733	C29733-	C	-	7	7	B.1.623	0.003755
noncoding	29733	C29733-	C	-	6	6	A	0.002322
noncoding	29733	C29733-	C	-	6	6	AY.13	0.000966
noncoding	29733	C29733-	C	-	6	6	AY.14	0.000528
noncoding	29733	C29733-	C	-	6	6	AY.34	0.000582
noncoding	29733	C29733G	C	G	6	6	AY.43	0.000027
noncoding	29733	C29733-	C	-	6	6	AY.54	0.000572
noncoding	29733	C29733-	C	-	6	6	AY.65	0.003198
noncoding	29733	C29733A	C	A	6	6	AY.7	0.001176
noncoding	29733	C29733-	C	-	6	6	AY.99.2	0.000553
noncoding	29733	C29733T	C	T	6	6	AZ.2	0.004926
noncoding	29733	C29733A	C	A	6	6	B.1.1	0.000109
noncoding	29733	C29733T	C	T	6	6	B.1.1.214	0.000333
noncoding	29733	C29733-	C	-	6	6	B.1.1.316	0.00555
noncoding	29733	C29733T	C	T	6	6	B.1.1.317	0.00247
noncoding	29733	C29733-	C	-	6	6	B.1.1.37	0.001157
noncoding	29733	C29733T	C	T	6	6	B.1.177.21	0.000459
noncoding	29733	C29733T	C	T	6	6	B.1.179	0.022556
noncoding	29733	C29733T	C	T	6	6	B.1.36.24	0.037037
noncoding	29733	C29733T	C	T	6	6	B.1.36.31	0.010508
noncoding	29733	C29733-	C	-	6	6	B.1.400	0.002574
noncoding	29733	C29733T	C	T	6	6	B.1.438	0.039216
noncoding	29733	C29733T	C	T	6	6	B.1.565	0.004862
noncoding	29733	C29733T	C	T	6	6	B.1.582	0.002944
noncoding	29733	C29733-	C	-	6	6	B.1.595.1	0.035088
noncoding	29733	C29733-	C	-	6	6	B.1.637	0.000438
noncoding	29733	C29733-	C	-	6	6	D.2	0.00045
noncoding	29733	C29733-	C	-	6	6	N.4	0.025532
noncoding	29733	C29733-	C	-	6	6	Q.1	0.000758
noncoding	29733	C29733-	C	-	5	5	A.1	0.001409
noncoding	29733	C29733T	C	T	5	5	AY.41	0.00147
noncoding	29733	C29733-	C	-	5	5	AY.46	0.00052
noncoding	29733	C29733T	C	T	5	5	AY.46.2	0.003177
noncoding	29733	C29733T	C	T	5	5	AY.53	0.001438
noncoding	29733	C29733T	C	T	5	5	AY.54	0.000477
noncoding	29733	C29733T	C	T	5	5	AY.55	0.004587
noncoding	29733	C29733T	C	T	5	5	AY.61	0.000524
noncoding	29733	C29733T	C	T	5	5	AY.7	0.00098
noncoding	29733	C29733-	C	-	5	5	AY.9	0.000338
noncoding	29733	C29733-	C	-	5	5	AY.98.1	0.000242
noncoding	29733	C29733-	C	-	5	5	B.1.1.306	0.002192
noncoding	29733	C29733-	C	-	5	5	B.1.1.317	0.002058
noncoding	29733	C29733-	C	-	5	5	B.1.1.318	0.001509
noncoding	29733	C29733T	C	T	5	5	B.1.1.33	0.002104
noncoding	29733	C29733-	C	-	5	5	B.1.177.7	0.000824
noncoding	29733	C29733T	C	T	5	5	B.1.240	0.001078
noncoding	29733	C29733-	C	-	5	5	B.1.258.14	0.004902
noncoding	29733	C29733-	C	-	5	5	B.1.389	0.00501
noncoding	29733	C29733-	C	-	5	5	B.1.408	0.01845
noncoding	29733	C29733-	C	-	5	5	B.1.595	0.001305
noncoding	29733	C29733-	C	-	5	5	B.1.609	0.002397
noncoding	29733	C29733T	C	T	4	4	AD.2	0.000876
noncoding	29733	C29733T	C	T	4	4	AY.106	0.00134
noncoding	29733	C29733A	C	A	4	4	AY.106	0.00134
noncoding	29733	C29733T	C	T	4	4	AY.107	0.001864
noncoding	29733	C29733T	C	T	4	4	AY.13	0.000644
noncoding	29733	C29733T	C	T	4	4	AY.14	0.000352
noncoding	29733	C29733T	C	T	4	4	AY.30	0.001583
noncoding	29733	C29733-	C	-	4	4	AY.30	0.001583
noncoding	29733	C29733-	C	-	4	4	AY.33	0.000267
noncoding	29733	C29733-	C	-	4	4	AY.36	0.000593
noncoding	29733	C29733T	C	T	4	4	AY.68	0.001095
noncoding	29733	C29733T	C	T	4	4	AY.70	0.000834
noncoding	29733	C29733T	C	T	4	4	AY.85	0.001709
noncoding	29733	C29733T	C	T	4	4	B.1.1.1	0.001307
noncoding	29733	C29733-	C	-	4	4	B.1.1.189	0.006051
noncoding	29733	C29733T	C	T	4	4	B.1.1.28	0.001245
noncoding	29733	C29733-	C	-	4	4	B.1.1.28	0.001245
noncoding	29733	C29733T	C	T	4	4	B.1.1.398	0.012903
noncoding	29733	C29733-	C	-	4	4	B.1.1.464	0.005891
noncoding	29733	C29733-	C	-	4	4	B.1.210	0.008529
noncoding	29733	C29733-	C	-	4	4	B.1.582	0.001963
noncoding	29733	C29733-	C	-	4	4	B.1.588	0.00364
noncoding	29733	C29733G	C	G	4	4	B.1.588	0.00364
noncoding	29733	C29733-	C	-	4	4	B.40	0.001457
noncoding	29733	C29733T	C	T	4	4	N.5	0.007067
noncoding	29733	C29733T	C	T	4	4	P.1.1	0.001271
noncoding	29733	C29733T	C	T	3	3	A.23.1	0.002113
noncoding	29733	C29733A	C	A	3	3	AY.10	0.00159
noncoding	29733	C29733A	C	A	3	3	AY.100	0.000138
noncoding	29733	C29733T	C	T	3	3	AY.105	0.001929
noncoding	29733	C29733-	C	-	3	3	AY.109	0.002219
noncoding	29733	C29733-	C	-	3	3	AY.110	0.000338
noncoding	29733	C29733-	C	-	3	3	AY.12	0.000948
noncoding	29733	C29733T	C	T	3	3	AY.19	0.003421
noncoding	29733	C29733A	C	A	3	3	AY.20	0.000117
noncoding	29733	C29733T	C	T	3	3	AY.23.1	0.001252
noncoding	29733	C29733T	C	T	3	3	AY.28	0.005671
noncoding	29733	C29733T	C	T	3	3	AY.36	0.000445
noncoding	29733	C29733T	C	T	3	3	AY.39.1	0.000119
noncoding	29733	C29733-	C	-	3	3	AY.40	0.002893
noncoding	29733	C29733T	C	T	3	3	AY.46.3	0.002801
noncoding	29733	C29733T	C	T	3	3	AY.58	0.002722
noncoding	29733	C29733-	C	-	3	3	AY.59	0.001589
noncoding	29733	C29733T	C	T	3	3	AY.59	0.001589
noncoding	29733	C29733-	C	-	3	3	AY.62	0.001307
noncoding	29733	C29733-	C	-	3	3	AY.7	0.000588
noncoding	29733	C29733T	C	T	3	3	AY.7.1	0.000338
noncoding	29733	C29733T	C	T	3	3	AY.79	0.003632
noncoding	29733	C29733T	C	T	3	3	AY.83	0.005172
noncoding	29733	C29733A	C	A	3	3	AY.99.2	0.000276
noncoding	29733	C29733T	C	T	3	3	AZ.1	0.002602
noncoding	29733	C29733T	C	T	3	3	B.1.1.171	0.011029
noncoding	29733	C29733-	C	-	3	3	B.1.1.192	0.006928
noncoding	29733	C29733-	C	-	3	3	B.1.1.228	0.009146
noncoding	29733	C29733-	C	-	3	3	B.1.1.236	0.02069
noncoding	29733	C29733T	C	T	3	3	B.1.1.263	0.004673
noncoding	29733	C29733T	C	T	3	3	B.1.1.333	0.003229
noncoding	29733	C29733-	C	-	3	3	B.1.1.337	0.010791
noncoding	29733	C29733T	C	T	3	3	B.1.1.368	0.009259
noncoding	29733	C29733-	C	-	3	3	B.1.1.397	0.006757
noncoding	29733	C29733-	C	-	3	3	B.1.1.428	0.028302
noncoding	29733	C29733G	C	G	3	3	B.1.1.453	0.025424
noncoding	29733	C29733-	C	-	3	3	B.1.1.46	0.0131
noncoding	29733	C29733-	C	-	3	3	B.1.1.70	0.001023
noncoding	29733	C29733-	C	-	3	3	B.1.145	0.157895
noncoding	29733	C29733T	C	T	3	3	B.1.157	0.008955
noncoding	29733	C29733-	C	-	3	3	B.1.177.18	0.00348
noncoding	29733	C29733-	C	-	3	3	B.1.177.60	0.000655
noncoding	29733	C29733-	C	-	3	3	B.1.177.87	0.002183
noncoding	29733	C29733T	C	T	3	3	B.1.265	0.003812
noncoding	29733	C29733-	C	-	3	3	B.1.36.16	0.004274
noncoding	29733	C29733-	C	-	3	3	B.1.36.17	0.001482
noncoding	29733	C29733-	C	-	3	3	B.1.36.18	0.001261
noncoding	29733	C29733-	C	-	3	3	B.1.36.31	0.005254
noncoding	29733	C29733-	C	-	3	3	B.1.396	0.002117
noncoding	29733	C29733-	C	-	3	3	B.1.399	0.005803
noncoding	29733	C29733-	C	-	3	3	B.1.416.1	0.004687
noncoding	29733	C29733-	C	-	3	3	B.1.44	0.025
noncoding	29733	C29733-	C	-	3	3	B.1.466.2	0.001174
noncoding	29733	C29733-	C	-	3	3	B.1.517	0.001281
noncoding	29733	C29733T	C	T	3	3	B.1.525	0.000339
noncoding	29733	C29733T	C	T	3	3	B.1.540	0.029126
noncoding	29733	C29733T	C	T	3	3	B.1.575	0.00091
noncoding	29733	C29733T	C	T	3	3	B.1.579	0.033708
noncoding	29733	C29733T	C	T	3	3	B.1.595.1	0.017544
noncoding	29733	C29733A	C	A	3	3	B.1.596	0.000261
noncoding	29733	C29733T	C	T	3	3	B.6	0.00273
noncoding	29733	C29733T	C	T	3	3	C.11	0.031915
noncoding	29733	C29733-	C	-	3	3	P.1.15	0.000697
noncoding	29733	C29733-	C	-	3	3	P.1.17	0.000485
noncoding	29733	C29733T	C	T	3	3	P.1.7	0.000958
noncoding	29733	C29733G	C	G	3	3	P.1.7	0.000958
noncoding	29733	C29733-	C	-	3	3	Q.8	0.000495
noncoding	29733	C29733T	C	T	3	3	W.4	0.004054
noncoding	29733	C29733T	C	T	2	2	A.2.5	0.000998
noncoding	29733	C29733T	C	T	2	2	A.21	0.00554
noncoding	29733	C29733-	C	-	2	2	A.23.1	0.001408
noncoding	29733	C29733T	C	T	2	2	A.27	0.003311
noncoding	29733	C29733-	C	-	2	2	AD.2	0.000438
noncoding	29733	C29733A	C	A	2	2	AY.102	0.000053
noncoding	29733	C29733-	C	-	2	2	AY.106	0.00067
noncoding	29733	C29733T	C	T	2	2	AY.108	0.002205
noncoding	29733	C29733T	C	T	2	2	AY.11	0.002677
noncoding	29733	C29733T	C	T	2	2	AY.110	0.000225
noncoding	29733	C29733G	C	G	2	2	AY.113	0.000285
noncoding	29733	C29733T	C	T	2	2	AY.113	0.000285
noncoding	29733	C29733G	C	G	2	2	AY.118	0.000125
noncoding	29733	C29733-	C	-	2	2	AY.120.2.1	0.000997
noncoding	29733	C29733-	C	-	2	2	AY.19	0.002281
noncoding	29733	C29733T	C	T	2	2	AY.24	0.000862
noncoding	29733	C29733G	C	G	2	2	AY.3	0.00002
noncoding	29733	C29733-	C	-	2	2	AY.3.1	0.000171
noncoding	29733	C29733T	C	T	2	2	AY.32	0.001065
noncoding	29733	C29733T	C	T	2	2	AY.35	0.000466
noncoding	29733	C29733-	C	-	2	2	AY.35	0.000466
noncoding	29733	C29733-	C	-	2	2	AY.39.1	0.000079
noncoding	29733	C29733T	C	T	2	2	AY.4.3	0.001684
noncoding	29733	C29733-	C	-	2	2	AY.46.3	0.001867
noncoding	29733	C29733-	C	-	2	2	AY.5.3	0.000675
noncoding	29733	C29733T	C	T	2	2	AY.5.4	0.000553
noncoding	29733	C29733-	C	-	2	2	AY.5.4	0.000553
noncoding	29733	C29733-	C	-	2	2	AY.51	0.001818
noncoding	29733	C29733-	C	-	2	2	AY.56	0.00321
noncoding	29733	C29733T	C	T	2	2	AY.63	0.000774
noncoding	29733	C29733A	C	A	2	2	AY.69	0.000373
noncoding	29733	C29733G	C	G	2	2	AY.75	0.000112
noncoding	29733	C29733-	C	-	2	2	AY.84	0.000875
noncoding	29733	C29733A	C	A	2	2	AY.9.2	0.000073
noncoding	29733	C29733T	C	T	2	2	AY.91	0.001461
noncoding	29733	C29733T	C	T	2	2	AY.92	0.000575
noncoding	29733	C29733-	C	-	2	2	AY.94	0.000885
noncoding	29733	C29733-	C	-	2	2	AY.95	0.001522
noncoding	29733	C29733A	C	A	2	2	AY.98	0.000158
noncoding	29733	C29733G	C	G	2	2	AY.98	0.000158
noncoding	29733	C29733-	C	-	2	2	B.1.1.1	0.000653
noncoding	29733	C29733T	C	T	2	2	B.1.1.144	0.057143
noncoding	29733	C29733T	C	T	2	2	B.1.1.153	0.002191
noncoding	29733	C29733-	C	-	2	2	B.1.1.170	0.002494
noncoding	29733	C29733-	C	-	2	2	B.1.1.194	0.009901
noncoding	29733	C29733T	C	T	2	2	B.1.1.226	0.011628
noncoding	29733	C29733T	C	T	2	2	B.1.1.241	0.004141
noncoding	29733	C29733T	C	T	2	2	B.1.1.269	0.002706
noncoding	29733	C29733-	C	-	2	2	B.1.1.284	0.000215
noncoding	29733	C29733-	C	-	2	2	B.1.1.305	0.007722
noncoding	29733	C29733-	C	-	2	2	B.1.1.348	0.001592
noncoding	29733	C29733-	C	-	2	2	B.1.1.354	0.008772
noncoding	29733	C29733-	C	-	2	2	B.1.1.369	0.000892
noncoding	29733	C29733T	C	T	2	2	B.1.1.372	0.001377
noncoding	29733	C29733T	C	T	2	2	B.1.1.419	0.014815
noncoding	29733	C29733-	C	-	2	2	B.1.1.434	0.000697
noncoding	29733	C29733-	C	-	2	2	B.1.1.50	0.001358
noncoding	29733	C29733A	C	A	2	2	B.1.1.519	0.000079
noncoding	29733	C29733-	C	-	2	2	B.1.1.528	0.009615
noncoding	29733	C29733-	C	-	2	2	B.1.1.63	0.000772
noncoding	29733	C29733-	C	-	2	2	B.1.111	0.00235
noncoding	29733	C29733A	C	A	2	2	B.1.160	0.000062
noncoding	29733	C29733T	C	T	2	2	B.1.160.14	0.004237
noncoding	29733	C29733-	C	-	2	2	B.1.160.32	0.008584
noncoding	29733	C29733T	C	T	2	2	B.1.160.33	0.00885
noncoding	29733	C29733T	C	T	2	2	B.1.177.18	0.00232
noncoding	29733	C29733-	C	-	2	2	B.1.177.32	0.002699
noncoding	29733	C29733T	C	T	2	2	B.1.177.32	0.002699
noncoding	29733	C29733-	C	-	2	2	B.1.177.50	0.00939
noncoding	29733	C29733T	C	T	2	2	B.1.177.75	0.002081
noncoding	29733	C29733T	C	T	2	2	B.1.177.76	0.004988
noncoding	29733	C29733-	C	-	2	2	B.1.177.78	0.019417
noncoding	29733	C29733T	C	T	2	2	B.1.177.79	0.004684
noncoding	29733	C29733T	C	T	2	2	B.1.177.8	0.001505
noncoding	29733	C29733-	C	-	2	2	B.1.206	0.001631
noncoding	29733	C29733T	C	T	2	2	B.1.214.2	0.001199
noncoding	29733	C29733-	C	-	2	2	B.1.23	0.012121
noncoding	29733	C29733T	C	T	2	2	B.1.241	0.001623
noncoding	29733	C29733A	C	A	2	2	B.1.243	0.000139
noncoding	29733	C29733-	C	-	2	2	B.1.258.3	0.00335
noncoding	29733	C29733-	C	-	2	2	B.1.298	0.004228
noncoding	29733	C29733T	C	T	2	2	B.1.311	0.000549
noncoding	29733	C29733T	C	T	2	2	B.1.324	0.00321
noncoding	29733	C29733T	C	T	2	2	B.1.343	0.041667
noncoding	29733	C29733A	C	A	2	2	B.1.351	0.000059
noncoding	29733	C29733T	C	T	2	2	B.1.36.10	0.009569
noncoding	29733	C29733T	C	T	2	2	B.1.36.18	0.00084
noncoding	29733	C29733-	C	-	2	2	B.1.36.8	0.002
noncoding	29733	C29733T	C	T	2	2	B.1.367	0.001585
noncoding	29733	C29733T	C	T	2	2	B.1.37	0.029412
noncoding	29733	C29733T	C	T	2	2	B.1.39	0.007812
noncoding	29733	C29733-	C	-	2	2	B.1.391	0.002255
noncoding	29733	C29733T	C	T	2	2	B.1.409	0.001563
noncoding	29733	C29733A	C	A	2	2	B.1.429	0.000047
noncoding	29733	C29733-	C	-	2	2	B.1.436	0.002058
noncoding	29733	C29733T	C	T	2	2	B.1.438.1	0.000215
noncoding	29733	C29733-	C	-	2	2	B.1.441	0.019231
noncoding	29733	C29733G	C	G	2	2	B.1.466	0.046512
noncoding	29733	C29733T	C	T	2	2	B.1.480	0.004975
noncoding	29733	C29733-	C	-	2	2	B.1.509	0.001732
noncoding	29733	C29733G	C	G	2	2	B.1.525	0.000226
noncoding	29733	C29733T	C	T	2	2	B.1.530	0.014286
noncoding	29733	C29733-	C	-	2	2	B.1.543	0.02
noncoding	29733	C29733T	C	T	2	2	B.1.564.1	0.003155
noncoding	29733	C29733-	C	-	2	2	B.1.568	0.002222
noncoding	29733	C29733T	C	T	2	2	B.1.571	0.019417
noncoding	29733	C29733-	C	-	2	2	B.1.576	0.001813
noncoding	29733	C29733A	C	A	2	2	B.1.600	0.011696
noncoding	29733	C29733A	C	A	2	2	B.1.601	0.060606
noncoding	29733	C29733-	C	-	2	2	B.1.617.1	0.000258
noncoding	29733	C29733-	C	-	2	2	B.1.627	0.00404
noncoding	29733	C29733T	C	T	2	2	B.1.628	0.000705
noncoding	29733	C29733-	C	-	2	2	B.1.628	0.000705
noncoding	29733	C29733-	C	-	2	2	B.39	0.004662
noncoding	29733	C29733-	C	-	2	2	B.4	0.004415
noncoding	29733	C29733T	C	T	2	2	B.40	0.000729
noncoding	29733	C29733-	C	-	2	2	C.38	0.016129
noncoding	29733	C29733-	C	-	2	2	N.5	0.003534
noncoding	29733	C29733-	C	-	2	2	P.1.10	0.000539
noncoding	29733	C29733T	C	T	2	2	P.1.10	0.000539
noncoding	29733	C29733T	C	T	2	2	P.1.12	0.000968
noncoding	29733	C29733-	C	-	2	2	P.1.13	0.001797
noncoding	29733	C29733A	C	A	2	2	P.1.14	0.000096
noncoding	29733	C29733T	C	T	2	2	P.1.15	0.000465
noncoding	29733	C29733-	C	-	2	2	Q.4	0.00091
noncoding	29733	C29733A	C	A	1	1	A.1	0.000282
noncoding	29733	C29733-	C	-	1	1	A.2.3	0.004739
noncoding	29733	C29733-	C	-	1	1	A.2.5	0.000499
noncoding	29733	C29733A	C	A	1	1	A.2.5.3	0.010309
noncoding	29733	C29733-	C	-	1	1	A.30	0.142857
noncoding	29733	C29733T	C	T	1	1	AA.6	0.016129
noncoding	29733	C29733T	C	T	1	1	AD.1	0.004115
noncoding	29733	C29733-	C	-	1	1	AK.2	0.045455
noncoding	29733	C29733V	C	V	1	1	All	0
noncoding	29733	C29733H	C	H	1	1	All	0
noncoding	29733	C29733-	C	-	1	1	AU.1	0.001266
noncoding	29733	C29733T	C	T	1	1	AY.10	0.00053
noncoding	29733	C29733-	C	-	1	1	AY.10	0.00053
noncoding	29733	C29733T	C	T	1	1	AY.101	0.00049
noncoding	29733	C29733G	C	G	1	1	AY.103	0.000006
noncoding	29733	C29733T	C	T	1	1	AY.104	0.001984
noncoding	29733	C29733-	C	-	1	1	AY.105	0.000643
noncoding	29733	C29733G	C	G	1	1	AY.106	0.000335
noncoding	29733	C29733A	C	A	1	1	AY.107	0.000466
noncoding	29733	C29733-	C	-	1	1	AY.108	0.001103
noncoding	29733	C29733-	C	-	1	1	AY.111	0.000183
noncoding	29733	C29733A	C	A	1	1	AY.117	0.000085
noncoding	29733	C29733A	C	A	1	1	AY.120	0.000037
noncoding	29733	C29733-	C	-	1	1	AY.120.1	0.000321
noncoding	29733	C29733G	C	G	1	1	AY.14	0.000088
noncoding	29733	C29733-	C	-	1	1	AY.16	0.00038
noncoding	29733	C29733T	C	T	1	1	AY.17	0.008197
noncoding	29733	C29733A	C	A	1	1	AY.23	0.00007
noncoding	29733	C29733G	C	G	1	1	AY.23	0.00007
noncoding	29733	C29733-	C	-	1	1	AY.27	0.000065
noncoding	29733	C29733A	C	A	1	1	AY.27	0.000065
noncoding	29733	C29733A	C	A	1	1	AY.29	0.000016
noncoding	29733	C29733G	C	G	1	1	AY.29	0.000016
noncoding	29733	C29733T	C	T	1	1	AY.29.1	0.000221
noncoding	29733	C29733-	C	-	1	1	AY.29.1	0.000221
noncoding	29733	C29733A	C	A	1	1	AY.32	0.000532
noncoding	29733	C29733G	C	G	1	1	AY.36	0.000148
noncoding	29733	C29733A	C	A	1	1	AY.37	0.000316
noncoding	29733	C29733T	C	T	1	1	AY.37	0.000316
noncoding	29733	C29733T	C	T	1	1	AY.38	0.000499
noncoding	29733	C29733G	C	G	1	1	AY.39	0.000025
noncoding	29733	C29733G	C	G	1	1	AY.4	0.000002
noncoding	29733	C29733A	C	A	1	1	AY.4.5	0.000107
noncoding	29733	C29733A	C	A	1	1	AY.40	0.000964
noncoding	29733	C29733A	C	A	1	1	AY.42	0.00004
noncoding	29733	C29733A	C	A	1	1	AY.45	0.000122
noncoding	29733	C29733G	C	G	1	1	AY.46	0.000104
noncoding	29733	C29733T	C	T	1	1	AY.48	0.000465
noncoding	29733	C29733-	C	-	1	1	AY.48	0.000465
noncoding	29733	C29733T	C	T	1	1	AY.50	0.000799
noncoding	29733	C29733-	C	-	1	1	AY.52	0.000814
noncoding	29733	C29733-	C	-	1	1	AY.55	0.000917
noncoding	29733	C29733A	C	A	1	1	AY.60	0.000938
noncoding	29733	C29733T	C	T	1	1	AY.62	0.000436
noncoding	29733	C29733T	C	T	1	1	AY.64	0.000595
noncoding	29733	C29733T	C	T	1	1	AY.65	0.000533
noncoding	29733	C29733-	C	-	1	1	AY.66	0.00107
noncoding	29733	C29733T	C	T	1	1	AY.67	0.000464
noncoding	29733	C29733T	C	T	1	1	AY.71	0.000475
noncoding	29733	C29733T	C	T	1	1	AY.73	0.000665
noncoding	29733	C29733T	C	T	1	1	AY.81	0.001992
noncoding	29733	C29733-	C	-	1	1	AY.81	0.001992
noncoding	29733	C29733-	C	-	1	1	AY.87	0.000833
noncoding	29733	C29733T	C	T	1	1	AY.88	0.000884
noncoding	29733	C29733G	C	G	1	1	AY.9	0.000068
noncoding	29733	C29733-	C	-	1	1	AY.91	0.00073
noncoding	29733	C29733A	C	A	1	1	AY.92	0.000287
noncoding	29733	C29733T	C	T	1	1	AY.93	0.000273
noncoding	29733	C29733T	C	T	1	1	AY.94	0.000443
noncoding	29733	C29733T	C	T	1	1	AY.99	0.001049
noncoding	29733	C29733-	C	-	1	1	AZ.1	0.000867
noncoding	29733	C29733T	C	T	1	1	AZ.3	0.00152
noncoding	29733	C29733G	C	G	1	1	B.1	0.000009
noncoding	29733	C29733A	C	A	1	1	B.1	0.000009
noncoding	29733	C29733G	C	G	1	1	B.1.1	0.000018
noncoding	29733	C29733A	C	A	1	1	B.1.1.1	0.000327
noncoding	29733	C29733T	C	T	1	1	B.1.1.10	0.001115
noncoding	29733	C29733-	C	-	1	1	B.1.1.10	0.001115
noncoding	29733	C29733T	C	T	1	1	B.1.1.115	0.008929
noncoding	29733	C29733T	C	T	1	1	B.1.1.118	0.010204
noncoding	29733	C29733T	C	T	1	1	B.1.1.123	0.017857
noncoding	29733	C29733T	C	T	1	1	B.1.1.157	0.000913
noncoding	29733	C29733-	C	-	1	1	B.1.1.174	0.003378
noncoding	29733	C29733-	C	-	1	1	B.1.1.196	0.005714
noncoding	29733	C29733-	C	-	1	1	B.1.1.197	0.037037
noncoding	29733	C29733T	C	T	1	1	B.1.1.198	0.001468
noncoding	29733	C29733-	C	-	1	1	B.1.1.198	0.001468
noncoding	29733	C29733T	C	T	1	1	B.1.1.207	0.001182
noncoding	29733	C29733T	C	T	1	1	B.1.1.216	0.00089
noncoding	29733	C29733-	C	-	1	1	B.1.1.216	0.00089
noncoding	29733	C29733A	C	A	1	1	B.1.1.216	0.00089
noncoding	29733	C29733-	C	-	1	1	B.1.1.218	0.007692
noncoding	29733	C29733-	C	-	1	1	B.1.1.229	0.005747
noncoding	29733	C29733T	C	T	1	1	B.1.1.229	0.005747
noncoding	29733	C29733T	C	T	1	1	B.1.1.243	0.004082
noncoding	29733	C29733-	C	-	1	1	B.1.1.275	0.011236
noncoding	29733	C29733-	C	-	1	1	B.1.1.277	0.000759
noncoding	29733	C29733T	C	T	1	1	B.1.1.277	0.000759
noncoding	29733	C29733T	C	T	1	1	B.1.1.282	0.011628
noncoding	29733	C29733-	C	-	1	1	B.1.1.286	0.002899
noncoding	29733	C29733-	C	-	1	1	B.1.1.294	0.001266
noncoding	29733	C29733-	C	-	1	1	B.1.1.298	0.000862
noncoding	29733	C29733T	C	T	1	1	B.1.1.301	0.001179
noncoding	29733	C29733T	C	T	1	1	B.1.1.311	0.000358
noncoding	29733	C29733A	C	A	1	1	B.1.1.311	0.000358
noncoding	29733	C29733T	C	T	1	1	B.1.1.315	0.008475
noncoding	29733	C29733A	C	A	1	1	B.1.1.318	0.000302
noncoding	29733	C29733T	C	T	1	1	B.1.1.318	0.000302
noncoding	29733	C29733T	C	T	1	1	B.1.1.339	0.010526
noncoding	29733	C29733T	C	T	1	1	B.1.1.371	0.010417
noncoding	29733	C29733-	C	-	1	1	B.1.1.372	0.000689
noncoding	29733	C29733T	C	T	1	1	B.1.1.374	0.002375
noncoding	29733	C29733T	C	T	1	1	B.1.1.377	0.001381
noncoding	29733	C29733A	C	A	1	1	B.1.1.389	0.006061
noncoding	29733	C29733-	C	-	1	1	B.1.1.389	0.006061
noncoding	29733	C29733T	C	T	1	1	B.1.1.391	0.008547
noncoding	29733	C29733T	C	T	1	1	B.1.1.397	0.002252
noncoding	29733	C29733T	C	T	1	1	B.1.1.409	0.002833
noncoding	29733	C29733T	C	T	1	1	B.1.1.412	0.007634
noncoding	29733	C29733-	C	-	1	1	B.1.1.420	0.001006
noncoding	29733	C29733-	C	-	1	1	B.1.1.432	0.001266
noncoding	29733	C29733T	C	T	1	1	B.1.1.46	0.004367
noncoding	29733	C29733-	C	-	1	1	B.1.1.47	0.005348
noncoding	29733	C29733-	C	-	1	1	B.1.1.517	0.006803
noncoding	29733	C29733T	C	T	1	1	B.1.1.70	0.000341
noncoding	29733	C29733T	C	T	1	1	B.1.1.71	0.006061
noncoding	29733	C29733-	C	-	1	1	B.1.1.71	0.006061
noncoding	29733	C29733T	C	T	1	1	B.1.111	0.001175
noncoding	29733	C29733T	C	T	1	1	B.1.126	0.001276
noncoding	29733	C29733T	C	T	1	1	B.1.128	0.000635
noncoding	29733	C29733-	C	-	1	1	B.1.139	0.000733
noncoding	29733	C29733-	C	-	1	1	B.1.149	0.003425
noncoding	29733	C29733G	C	G	1	1	B.1.160	0.000031
noncoding	29733	C29733T	C	T	1	1	B.1.160.26	0.002421
noncoding	29733	C29733A	C	A	1	1	B.1.160.31	0.008065
noncoding	29733	C29733T	C	T	1	1	B.1.160.7	0.002079
noncoding	29733	C29733T	C	T	1	1	B.1.160.8	0.001289
noncoding	29733	C29733T	C	T	1	1	B.1.170	0.00431
noncoding	29733	C29733T	C	T	1	1	B.1.177.12	0.000152
noncoding	29733	C29733T	C	T	1	1	B.1.177.31	0.011494
noncoding	29733	C29733T	C	T	1	1	B.1.177.33	0.001645
noncoding	29733	C29733G	C	G	1	1	B.1.177.4	0.000211
noncoding	29733	C29733-	C	-	1	1	B.1.177.44	0.000519
noncoding	29733	C29733-	C	-	1	1	B.1.177.51	0.004566
noncoding	29733	C29733-	C	-	1	1	B.1.177.53	0.002392
noncoding	29733	C29733T	C	T	1	1	B.1.177.57	0.000281
noncoding	29733	C29733-	C	-	1	1	B.1.177.57	0.000281
noncoding	29733	C29733-	C	-	1	1	B.1.177.6	0.000977
noncoding	29733	C29733T	C	T	1	1	B.1.177.6	0.000977
noncoding	29733	C29733T	C	T	1	1	B.1.177.63	0.002703
noncoding	29733	C29733-	C	-	1	1	B.1.177.65	0.000665
noncoding	29733	C29733T	C	T	1	1	B.1.177.73	0.000566
noncoding	29733	C29733T	C	T	1	1	B.1.177.77	0.000726
noncoding	29733	C29733T	C	T	1	1	B.1.177.83	0.001481
noncoding	29733	C29733-	C	-	1	1	B.1.177.86	0.000183
noncoding	29733	C29733T	C	T	1	1	B.1.177.87	0.000728
noncoding	29733	C29733-	C	-	1	1	B.1.180	0.05
noncoding	29733	C29733-	C	-	1	1	B.1.192	0.009259
noncoding	29733	C29733T	C	T	1	1	B.1.199	0.004132
noncoding	29733	C29733G	C	G	1	1	B.1.2	0.000009
noncoding	29733	C29733T	C	T	1	1	B.1.201	0.005682
noncoding	29733	C29733T	C	T	1	1	B.1.206	0.000816
noncoding	29733	C29733-	C	-	1	1	B.1.214.2	0.0006
noncoding	29733	C29733A	C	A	1	1	B.1.221	0.000071
noncoding	29733	C29733T	C	T	1	1	B.1.221.1	0.002907
noncoding	29733	C29733T	C	T	1	1	B.1.221.3	0.000833
noncoding	29733	C29733-	C	-	1	1	B.1.222	0.001692
noncoding	29733	C29733T	C	T	1	1	B.1.232	0.000537
noncoding	29733	C29733T	C	T	1	1	B.1.235	0.002519
noncoding	29733	C29733T	C	T	1	1	B.1.239	0.001221
noncoding	29733	C29733-	C	-	1	1	B.1.241	0.000812
noncoding	29733	C29733-	C	-	1	1	B.1.258.16	0.001637
noncoding	29733	C29733T	C	T	1	1	B.1.258.17	0.000104
noncoding	29733	C29733G	C	G	1	1	B.1.258.22	0.002667
noncoding	29733	C29733-	C	-	1	1	B.1.291	0.019231
noncoding	29733	C29733A	C	A	1	1	B.1.3	0.002618
noncoding	29733	C29733T	C	T	1	1	B.1.301	0.005917
noncoding	29733	C29733A	C	A	1	1	B.1.311	0.000275
noncoding	29733	C29733T	C	T	1	1	B.1.320	0.001245
noncoding	29733	C29733T	C	T	1	1	B.1.329	0.000608
noncoding	29733	C29733T	C	T	1	1	B.1.333	0.010526
noncoding	29733	C29733G	C	G	1	1	B.1.351	0.00003
noncoding	29733	C29733-	C	-	1	1	B.1.351.3	0.000876
noncoding	29733	C29733T	C	T	1	1	B.1.356	0.001727
noncoding	29733	C29733G	C	G	1	1	B.1.36	0.000146
noncoding	29733	C29733-	C	-	1	1	B.1.36.19	0.009259
noncoding	29733	C29733T	C	T	1	1	B.1.36.26	0.002857
noncoding	29733	C29733-	C	-	1	1	B.1.36.37	0.002778
noncoding	29733	C29733T	C	T	1	1	B.1.36.8	0.001
noncoding	29733	C29733-	C	-	1	1	B.1.362	0.001541
noncoding	29733	C29733T	C	T	1	1	B.1.362	0.001541
noncoding	29733	C29733-	C	-	1	1	B.1.369	0.000285
noncoding	29733	C29733G	C	G	1	1	B.1.371	0.001122
noncoding	29733	C29733T	C	T	1	1	B.1.375	0.00082
noncoding	29733	C29733T	C	T	1	1	B.1.381	0.007812
noncoding	29733	C29733T	C	T	1	1	B.1.397	0.004854
noncoding	29733	C29733T	C	T	1	1	B.1.398	0.002976
noncoding	29733	C29733T	C	T	1	1	B.1.401	0.008197
noncoding	29733	C29733-	C	-	1	1	B.1.442	0.035714
noncoding	29733	C29733-	C	-	1	1	B.1.443	0.004673
noncoding	29733	C29733T	C	T	1	1	B.1.456	0.003268
noncoding	29733	C29733T	C	T	1	1	B.1.459	0.004082
noncoding	29733	C29733T	C	T	1	1	B.1.468	0.005714
noncoding	29733	C29733-	C	-	1	1	B.1.470	0.001404
noncoding	29733	C29733-	C	-	1	1	B.1.493	0.025641
noncoding	29733	C29733T	C	T	1	1	B.1.499	0.00105
noncoding	29733	C29733T	C	T	1	1	B.1.503	0.002488
noncoding	29733	C29733A	C	A	1	1	B.1.511	0.034483
noncoding	29733	C29733T	C	T	1	1	B.1.517	0.000427
noncoding	29733	C29733H	C	H	1	1	B.1.525	0.000113
noncoding	29733	C29733V	C	V	1	1	B.1.525	0.000113
noncoding	29733	C29733T	C	T	1	1	B.1.527	0.003704
noncoding	29733	C29733-	C	-	1	1	B.1.551	0.00129
noncoding	29733	C29733T	C	T	1	1	B.1.552	0.015152
noncoding	29733	C29733T	C	T	1	1	B.1.561	0.000397
noncoding	29733	C29733-	C	-	1	1	B.1.561	0.000397
noncoding	29733	C29733T	C	T	1	1	B.1.564	0.000426
noncoding	29733	C29733-	C	-	1	1	B.1.564.1	0.001577
noncoding	29733	C29733T	C	T	1	1	B.1.567	0.003333
noncoding	29733	C29733T	C	T	1	1	B.1.576	0.000907
noncoding	29733	C29733-	C	-	1	1	B.1.577	0.000687
noncoding	29733	C29733T	C	T	1	1	B.1.580	0.004065
noncoding	29733	C29733T	C	T	1	1	B.1.589	0.007576
noncoding	29733	C29733T	C	T	1	1	B.1.591	0.010638
noncoding	29733	C29733-	C	-	1	1	B.1.597	0.00463
noncoding	29733	C29733T	C	T	1	1	B.1.599	0.00365
noncoding	29733	C29733A	C	A	1	1	B.1.599	0.00365
noncoding	29733	C29733-	C	-	1	1	B.1.600	0.005848
noncoding	29733	C29733T	C	T	1	1	B.1.600	0.005848
noncoding	29733	C29733-	C	-	1	1	B.1.617.3	0.002985
noncoding	29733	C29733-	C	-	1	1	B.1.619	0.000871
noncoding	29733	C29733-	C	-	1	1	B.1.620	0.000946
noncoding	29733	C29733A	C	A	1	1	B.1.621	0.000089
noncoding	29733	C29733T	C	T	1	1	B.1.621.1	0.000506
noncoding	29733	C29733T	C	T	1	1	B.1.627	0.00202
noncoding	29733	C29733-	C	-	1	1	B.1.633	0.041667
noncoding	29733	C29733T	C	T	1	1	B.1.634	0.003425
noncoding	29733	C29733-	C	-	1	1	B.3	0.000831
noncoding	29733	C29733-	C	-	1	1	B.3.1	0.001658
noncoding	29733	C29733-	C	-	1	1	B.31	0.003731
noncoding	29733	C29733T	C	T	1	1	B.4.1	0.018868
noncoding	29733	C29733-	C	-	1	1	B.55	0.00295
noncoding	29733	C29733-	C	-	1	1	B.6	0.00091
noncoding	29733	C29733A	C	A	1	1	B.60	0.015873
noncoding	29733	C29733-	C	-	1	1	C.1.2	0.004255
noncoding	29733	C29733-	C	-	1	1	C.36	0.000911
noncoding	29733	C29733T	C	T	1	1	C.38	0.008065
noncoding	29733	C29733A	C	A	1	1	L.1	0.001905
noncoding	29733	C29733A	C	A	1	1	P.1	0.000016
noncoding	29733	C29733-	C	-	1	1	P.1.1	0.000318
noncoding	29733	C29733T	C	T	1	1	P.1.11	0.010204
noncoding	29733	C29733-	C	-	1	1	P.1.2	0.001156
noncoding	29733	C29733T	C	T	1	1	P.1.2	0.001156
noncoding	29733	C29733-	C	-	1	1	P.1.4	0.000977
noncoding	29733	C29733A	C	A	1	1	P.1.7	0.000319
noncoding	29733	C29733-	C	-	1	1	P.1.7	0.000319
noncoding	29733	C29733T	C	T	1	1	P.3	0.001595
noncoding	29733	C29733-	C	-	1	1	P.6	0.003145
noncoding	29733	C29733-	C	-	1	1	P.7	0.004367
noncoding	29733	C29733G	C	G	1	1	Q.1	0.000126
noncoding	29733	C29733-	C	-	1	1	Q.2	0.000613
noncoding	29733	C29733-	C	-	1	1	Q.3	0.000145
noncoding	29733	C29733T	C	T	1	1	Q.7	0.001111
noncoding	29733	C29733-	C	-	1	1	W.1	0.008696
noncoding	29733	C29733-	C	-	1	1	W.4	0.001351

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.