CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
noncoding | 29731 | A29731- | noncoding | A | - | 13832 | 13832 | 1 | 29731-29731 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
noncoding | 29731 | A29731- | A | - | 13832 | 13832 | All | 0.002646 |
noncoding | 29731 | A29731- | A | - | 3715 | 3715 | B.1.525 | 0.420392 |
noncoding | 29731 | A29731- | A | - | 1917 | 1917 | B.1.1.7 | 0.001716 |
noncoding | 29731 | A29731- | A | - | 1754 | 1754 | B.1.1.311 | 0.628223 |
noncoding | 29731 | A29731- | A | - | 834 | 834 | AY.38 | 0.416375 |
noncoding | 29731 | A29731- | A | - | 563 | 563 | AY.4 | 0.000876 |
noncoding | 29731 | A29731- | A | - | 411 | 411 | B.1.617.2 | 0.001548 |
noncoding | 29731 | A29731- | A | - | 362 | 362 | B.1.351.2 | 0.109531 |
noncoding | 29731 | A29731- | A | - | 287 | 287 | AY.5 | 0.005926 |
noncoding | 29731 | A29731- | A | - | 284 | 284 | AY.39 | 0.007018 |
noncoding | 29731 | A29731- | A | - | 188 | 188 | B.1.526 | 0.004419 |
noncoding | 29731 | A29731- | A | - | 175 | 175 | B.1 | 0.001603 |
noncoding | 29731 | A29731- | A | - | 157 | 157 | AY.103 | 0.000975 |
noncoding | 29731 | A29731- | A | - | 147 | 147 | B.1.177 | 0.001936 |
noncoding | 29731 | A29731- | A | - | 122 | 122 | B.1.1 | 0.002213 |
noncoding | 29731 | A29731- | A | - | 109 | 109 | AY.120 | 0.004052 |
noncoding | 29731 | A29731- | A | - | 109 | 109 | B.1.2 | 0.00096 |
noncoding | 29731 | A29731- | A | - | 109 | 109 | B.1.429 | 0.002565 |
noncoding | 29731 | A29731- | A | - | 102 | 102 | AY.25 | 0.000614 |
noncoding | 29731 | A29731- | A | - | 101 | 101 | P.1 | 0.001591 |
noncoding | 29731 | A29731- | A | - | 97 | 97 | B.1.221 | 0.00689 |
noncoding | 29731 | A29731- | A | - | 96 | 96 | AY.73 | 0.063872 |
noncoding | 29731 | A29731- | A | - | 94 | 94 | AY.43 | 0.000416 |
noncoding | 29731 | A29731- | A | - | 93 | 93 | AY.47 | 0.002893 |
noncoding | 29731 | A29731- | A | - | 84 | 84 | AY.42 | 0.003379 |
noncoding | 29731 | A29731- | A | - | 84 | 84 | B.1.177.81 | 0.015903 |
noncoding | 29731 | A29731- | A | - | 70 | 70 | AY.3 | 0.000696 |
noncoding | 29731 | A29731- | A | - | 64 | 64 | B.1.1.519 | 0.002541 |
noncoding | 29731 | A29731- | A | - | 61 | 61 | B.1.160 | 0.001902 |
noncoding | 29731 | A29731- | A | - | 51 | 51 | AY.44 | 0.00031 |
noncoding | 29731 | A29731- | A | - | 50 | 50 | B.1.243 | 0.003479 |
noncoding | 29731 | A29731- | A | - | 46 | 46 | C.16 | 0.04878 |
noncoding | 29731 | A29731- | A | - | 44 | 44 | B.1.177.24 | 0.056995 |
noncoding | 29731 | A29731- | A | - | 41 | 41 | P.1.16 | 0.015339 |
noncoding | 29731 | A29731- | A | - | 33 | 33 | B.1.351 | 0.000981 |
noncoding | 29731 | A29731- | A | - | 30 | 30 | R.1 | 0.0027 |
noncoding | 29731 | A29731- | A | - | 28 | 28 | B.1.258 | 0.001863 |
noncoding | 29731 | A29731- | A | - | 27 | 27 | AY.26 | 0.000764 |
noncoding | 29731 | A29731- | A | - | 27 | 27 | B.1.346 | 0.035387 |
noncoding | 29731 | A29731- | A | - | 25 | 25 | AY.29 | 0.000394 |
noncoding | 29731 | A29731- | A | - | 25 | 25 | B.1.427 | 0.001262 |
noncoding | 29731 | A29731- | A | - | 23 | 23 | AY.100 | 0.001058 |
noncoding | 29731 | A29731- | A | - | 23 | 23 | AY.102 | 0.00061 |
noncoding | 29731 | A29731- | A | - | 23 | 23 | AY.4.2 | 0.000499 |
noncoding | 29731 | A29731- | A | - | 22 | 22 | B.1.1.368 | 0.067901 |
noncoding | 29731 | A29731- | A | - | 21 | 21 | B.1.305 | 0.045161 |
noncoding | 29731 | A29731- | A | - | 20 | 20 | B.1.289 | 0.053191 |
noncoding | 29731 | A29731- | A | - | 20 | 20 | B.1.575 | 0.006068 |
noncoding | 29731 | A29731- | A | - | 20 | 20 | B.1.596 | 0.001743 |
noncoding | 29731 | A29731- | A | - | 19 | 19 | AY.92 | 0.005458 |
noncoding | 29731 | A29731- | A | - | 18 | 18 | AY.20 | 0.0007 |
noncoding | 29731 | A29731- | A | - | 18 | 18 | B.1.1.172 | 0.327273 |
noncoding | 29731 | A29731- | A | - | 18 | 18 | B.1.1.222 | 0.003672 |
noncoding | 29731 | A29731- | A | - | 18 | 18 | B.1.1.307 | 0.04557 |
noncoding | 29731 | A29731- | A | - | 18 | 18 | B.1.404 | 0.023438 |
noncoding | 29731 | A29731- | A | - | 18 | 18 | P.1.14 | 0.00086 |
noncoding | 29731 | A29731- | A | - | 17 | 17 | B.1.621 | 0.001505 |
noncoding | 29731 | A29731- | A | - | 16 | 16 | AY.45 | 0.001947 |
noncoding | 29731 | A29731- | A | - | 16 | 16 | AY.6 | 0.000658 |
noncoding | 29731 | A29731- | A | - | 16 | 16 | B.1.1.265 | 0.050473 |
noncoding | 29731 | A29731- | A | - | 15 | 15 | AY.119 | 0.00053 |
noncoding | 29731 | A29731- | A | - | 14 | 14 | B.1.36.1 | 0.015964 |
noncoding | 29731 | A29731- | A | - | 14 | 14 | C.37 | 0.001625 |
noncoding | 29731 | A29731- | A | - | 13 | 13 | AY.118 | 0.000814 |
noncoding | 29731 | A29731- | A | - | 13 | 13 | AY.9.1 | 0.001088 |
noncoding | 29731 | A29731- | A | - | 12 | 12 | B.1.1.416 | 0.01086 |
noncoding | 29731 | A29731- | A | - | 12 | 12 | B.1.36 | 0.001751 |
noncoding | 29731 | A29731- | A | - | 11 | 11 | AY.117 | 0.00093 |
noncoding | 29731 | A29731- | A | - | 11 | 11 | AY.74 | 0.001272 |
noncoding | 29731 | A29731- | A | - | 11 | 11 | AY.9.2 | 0.000404 |
noncoding | 29731 | A29731- | A | - | 11 | 11 | B.1.1.214 | 0.00061 |
noncoding | 29731 | A29731- | A | - | 11 | 11 | P.2 | 0.002053 |
noncoding | 29731 | A29731- | A | - | 10 | 10 | AY.75 | 0.00056 |
noncoding | 29731 | A29731- | A | - | 10 | 10 | B.1.1.25 | 0.005685 |
noncoding | 29731 | A29731- | A | - | 10 | 10 | B.1.1.279 | 0.011211 |
noncoding | 29731 | A29731- | A | - | 10 | 10 | B.1.1.33 | 0.004209 |
noncoding | 29731 | A29731- | A | - | 10 | 10 | B.1.177.75 | 0.010406 |
noncoding | 29731 | A29731- | A | - | 10 | 10 | B.1.36.29 | 0.005173 |
noncoding | 29731 | A29731- | A | - | 9 | 9 | AY.114 | 0.00208 |
noncoding | 29731 | A29731- | A | - | 9 | 9 | AY.61 | 0.000943 |
noncoding | 29731 | A29731- | A | - | 9 | 9 | B | 0.00115 |
noncoding | 29731 | A29731- | A | - | 9 | 9 | B.1.160.14 | 0.019068 |
noncoding | 29731 | A29731- | A | - | 9 | 9 | B.1.177.62 | 0.010727 |
noncoding | 29731 | A29731- | A | - | 9 | 9 | B.1.398 | 0.026786 |
noncoding | 29731 | A29731- | A | - | 9 | 9 | B.1.416 | 0.011421 |
noncoding | 29731 | A29731- | A | - | 8 | 8 | AY.23 | 0.000558 |
noncoding | 29731 | A29731- | A | - | 8 | 8 | AY.46.4 | 0.001316 |
noncoding | 29731 | A29731- | A | - | 8 | 8 | AY.46.5 | 0.001587 |
noncoding | 29731 | A29731- | A | - | 8 | 8 | AY.46.6 | 0.000578 |
noncoding | 29731 | A29731- | A | - | 8 | 8 | B.1.1.153 | 0.008762 |
noncoding | 29731 | A29731- | A | - | 8 | 8 | C.36.3 | 0.004538 |
noncoding | 29731 | A29731- | A | - | 7 | 7 | AY.75.1 | 0.001262 |
noncoding | 29731 | A29731- | A | - | 7 | 7 | AY.85 | 0.00299 |
noncoding | 29731 | A29731- | A | - | 7 | 7 | B.1.1.39 | 0.003568 |
noncoding | 29731 | A29731- | A | - | 7 | 7 | B.1.110.3 | 0.005029 |
noncoding | 29731 | A29731- | A | - | 7 | 7 | B.1.160.33 | 0.030973 |
noncoding | 29731 | A29731- | A | - | 7 | 7 | B.1.36.22 | 0.008454 |
noncoding | 29731 | A29731- | A | - | 7 | 7 | B.1.499 | 0.007353 |
noncoding | 29731 | A29731- | A | - | 7 | 7 | B.1.623 | 0.003755 |
noncoding | 29731 | A29731- | A | - | 6 | 6 | AY.13 | 0.000966 |
noncoding | 29731 | A29731- | A | - | 6 | 6 | AY.14 | 0.000528 |
noncoding | 29731 | A29731- | A | - | 6 | 6 | AY.34 | 0.000582 |
noncoding | 29731 | A29731- | A | - | 6 | 6 | AY.99.2 | 0.000553 |
noncoding | 29731 | A29731- | A | - | 6 | 6 | B.1.1.316 | 0.00555 |
noncoding | 29731 | A29731- | A | - | 6 | 6 | B.1.1.37 | 0.001157 |
noncoding | 29731 | A29731- | A | - | 6 | 6 | B.1.240 | 0.001293 |
noncoding | 29731 | A29731- | A | - | 6 | 6 | B.1.400 | 0.002574 |
noncoding | 29731 | A29731- | A | - | 6 | 6 | B.1.595.1 | 0.035088 |
noncoding | 29731 | A29731- | A | - | 6 | 6 | B.1.637 | 0.000438 |
noncoding | 29731 | A29731- | A | - | 6 | 6 | D.2 | 0.00045 |
noncoding | 29731 | A29731- | A | - | 6 | 6 | N.4 | 0.025532 |
noncoding | 29731 | A29731- | A | - | 5 | 5 | A | 0.001935 |
noncoding | 29731 | A29731- | A | - | 5 | 5 | A.1 | 0.001409 |
noncoding | 29731 | A29731- | A | - | 5 | 5 | AY.46 | 0.00052 |
noncoding | 29731 | A29731- | A | - | 5 | 5 | AY.54 | 0.000477 |
noncoding | 29731 | A29731- | A | - | 5 | 5 | AY.65 | 0.002665 |
noncoding | 29731 | A29731- | A | - | 5 | 5 | AY.98.1 | 0.000242 |
noncoding | 29731 | A29731- | A | - | 5 | 5 | B.1.1.28 | 0.001556 |
noncoding | 29731 | A29731- | A | - | 5 | 5 | B.1.1.317 | 0.002058 |
noncoding | 29731 | A29731- | A | - | 5 | 5 | B.1.1.318 | 0.001509 |
noncoding | 29731 | A29731- | A | - | 5 | 5 | B.1.177.7 | 0.000824 |
noncoding | 29731 | A29731- | A | - | 5 | 5 | B.1.389 | 0.00501 |
noncoding | 29731 | A29731- | A | - | 5 | 5 | B.1.408 | 0.01845 |
noncoding | 29731 | A29731- | A | - | 5 | 5 | B.1.595 | 0.001305 |
noncoding | 29731 | A29731- | A | - | 5 | 5 | B.1.609 | 0.002397 |
noncoding | 29731 | A29731- | A | - | 5 | 5 | Q.1 | 0.000632 |
noncoding | 29731 | A29731- | A | - | 4 | 4 | AY.30 | 0.001583 |
noncoding | 29731 | A29731- | A | - | 4 | 4 | AY.33 | 0.000267 |
noncoding | 29731 | A29731- | A | - | 4 | 4 | AY.36 | 0.000593 |
noncoding | 29731 | A29731- | A | - | 4 | 4 | AY.9 | 0.00027 |
noncoding | 29731 | A29731- | A | - | 4 | 4 | B.1.1.189 | 0.006051 |
noncoding | 29731 | A29731- | A | - | 4 | 4 | B.1.1.306 | 0.001754 |
noncoding | 29731 | A29731- | A | - | 4 | 4 | B.1.1.464 | 0.005891 |
noncoding | 29731 | A29731- | A | - | 4 | 4 | B.1.177.60 | 0.000874 |
noncoding | 29731 | A29731- | A | - | 4 | 4 | B.1.234 | 0.000528 |
noncoding | 29731 | A29731- | A | - | 4 | 4 | B.1.258.17 | 0.000416 |
noncoding | 29731 | A29731- | A | - | 4 | 4 | B.1.582 | 0.001963 |
noncoding | 29731 | A29731- | A | - | 4 | 4 | B.1.588 | 0.00364 |
noncoding | 29731 | A29731- | A | - | 4 | 4 | B.40 | 0.001457 |
noncoding | 29731 | A29731- | A | - | 3 | 3 | AY.109 | 0.002219 |
noncoding | 29731 | A29731- | A | - | 3 | 3 | AY.110 | 0.000338 |
noncoding | 29731 | A29731- | A | - | 3 | 3 | AY.12 | 0.000948 |
noncoding | 29731 | A29731- | A | - | 3 | 3 | AY.62 | 0.001307 |
noncoding | 29731 | A29731- | A | - | 3 | 3 | AY.7 | 0.000588 |
noncoding | 29731 | A29731- | A | - | 3 | 3 | B.1.1.192 | 0.006928 |
noncoding | 29731 | A29731- | A | - | 3 | 3 | B.1.1.228 | 0.009146 |
noncoding | 29731 | A29731- | A | - | 3 | 3 | B.1.1.236 | 0.02069 |
noncoding | 29731 | A29731- | A | - | 3 | 3 | B.1.1.337 | 0.010791 |
noncoding | 29731 | A29731- | A | - | 3 | 3 | B.1.1.397 | 0.006757 |
noncoding | 29731 | A29731- | A | - | 3 | 3 | B.1.1.428 | 0.028302 |
noncoding | 29731 | A29731- | A | - | 3 | 3 | B.1.1.46 | 0.0131 |
noncoding | 29731 | A29731- | A | - | 3 | 3 | B.1.1.70 | 0.001023 |
noncoding | 29731 | A29731- | A | - | 3 | 3 | B.1.145 | 0.157895 |
noncoding | 29731 | A29731- | A | - | 3 | 3 | B.1.177.18 | 0.00348 |
noncoding | 29731 | A29731- | A | - | 3 | 3 | B.1.36.18 | 0.001261 |
noncoding | 29731 | A29731- | A | - | 3 | 3 | B.1.36.31 | 0.005254 |
noncoding | 29731 | A29731- | A | - | 3 | 3 | B.1.396 | 0.002117 |
noncoding | 29731 | A29731- | A | - | 3 | 3 | B.1.399 | 0.005803 |
noncoding | 29731 | A29731- | A | - | 3 | 3 | B.1.416.1 | 0.004687 |
noncoding | 29731 | A29731- | A | - | 3 | 3 | B.1.44 | 0.025 |
noncoding | 29731 | A29731- | A | - | 3 | 3 | B.1.466.2 | 0.001174 |
noncoding | 29731 | A29731- | A | - | 3 | 3 | B.1.517 | 0.001281 |
noncoding | 29731 | A29731- | A | - | 3 | 3 | B.1.617.1 | 0.000387 |
noncoding | 29731 | A29731- | A | - | 3 | 3 | P.1.15 | 0.000697 |
noncoding | 29731 | A29731- | A | - | 3 | 3 | P.1.17 | 0.000485 |
noncoding | 29731 | A29731- | A | - | 3 | 3 | Q.8 | 0.000495 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | AD.2 | 0.000438 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | AY.106 | 0.00067 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | AY.120.2.1 | 0.000997 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | AY.19 | 0.002281 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | AY.3.1 | 0.000171 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | AY.35 | 0.000466 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | AY.39.1 | 0.000079 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | AY.40 | 0.001929 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | AY.46.3 | 0.001867 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | AY.5.3 | 0.000675 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | AY.5.4 | 0.000553 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | AY.51 | 0.001818 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | AY.56 | 0.00321 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | AY.59 | 0.001059 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | AY.84 | 0.000875 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | AY.95 | 0.001522 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.1.1.1 | 0.000653 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.1.1.170 | 0.002494 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.1.1.194 | 0.009901 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.1.1.284 | 0.000215 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.1.1.305 | 0.007722 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.1.1.348 | 0.001592 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.1.1.354 | 0.008772 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.1.1.369 | 0.000892 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.1.1.434 | 0.000697 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.1.1.50 | 0.001358 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.1.1.528 | 0.009615 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.1.1.63 | 0.000772 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.1.111 | 0.00235 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.1.160.32 | 0.008584 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.1.177.32 | 0.002699 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.1.177.50 | 0.00939 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.1.177.87 | 0.001456 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.1.206 | 0.001631 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.1.210 | 0.004264 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.1.23 | 0.012121 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.1.298 | 0.004228 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.1.36.17 | 0.000988 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.1.36.8 | 0.002 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.1.391 | 0.002255 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.1.436 | 0.002058 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.1.441 | 0.019231 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.1.509 | 0.001732 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.1.568 | 0.002222 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.1.576 | 0.001813 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.1.627 | 0.00404 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.1.628 | 0.000705 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.39 | 0.004662 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | B.4 | 0.004415 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | C.38 | 0.016129 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | N.5 | 0.003534 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | P.1.10 | 0.000539 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | P.1.13 | 0.001797 |
noncoding | 29731 | A29731- | A | - | 2 | 2 | Q.4 | 0.00091 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | A.2.3 | 0.004739 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | A.2.5 | 0.000499 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | A.23.1 | 0.000704 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | AK.2 | 0.045455 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | AU.1 | 0.001266 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | AY.10 | 0.00053 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | AY.105 | 0.000643 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | AY.108 | 0.001103 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | AY.111 | 0.000183 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | AY.120.1 | 0.000321 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | AY.16 | 0.00038 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | AY.27 | 0.000065 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | AY.29.1 | 0.000221 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | AY.48 | 0.000465 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | AY.52 | 0.000814 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | AY.55 | 0.000917 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | AY.66 | 0.00107 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | AY.81 | 0.001992 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | AY.87 | 0.000833 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | AY.91 | 0.00073 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | AY.94 | 0.000443 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | AZ.1 | 0.000867 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.1.10 | 0.001115 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.1.174 | 0.003378 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.1.196 | 0.005714 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.1.197 | 0.037037 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.1.198 | 0.001468 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.1.216 | 0.00089 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.1.218 | 0.007692 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.1.229 | 0.005747 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.1.277 | 0.000759 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.1.286 | 0.002899 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.1.294 | 0.001266 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.1.298 | 0.000862 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.1.339 | 0.010526 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.1.372 | 0.000689 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.1.389 | 0.006061 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.1.432 | 0.001266 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.1.47 | 0.005348 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.1.517 | 0.006803 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.1.71 | 0.006061 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.139 | 0.000733 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.177.44 | 0.000519 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.177.51 | 0.004566 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.177.53 | 0.002392 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.177.57 | 0.000281 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.177.6 | 0.000977 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.177.65 | 0.000665 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.177.86 | 0.000183 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.180 | 0.05 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.192 | 0.009259 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.222 | 0.001692 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.241 | 0.000812 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.258.16 | 0.001637 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.291 | 0.019231 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.311 | 0.000275 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.351.3 | 0.000876 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.36.19 | 0.009259 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.362 | 0.001541 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.369 | 0.000285 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.422 | 0.000812 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.443 | 0.004673 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.470 | 0.001404 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.493 | 0.025641 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.551 | 0.00129 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.561 | 0.000397 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.564.1 | 0.001577 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.597 | 0.00463 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.600 | 0.005848 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.617.3 | 0.002985 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.619 | 0.000871 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.620 | 0.000946 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.1.633 | 0.041667 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.3 | 0.000831 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.3.1 | 0.001658 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.31 | 0.003731 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.55 | 0.00295 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | B.6 | 0.00091 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | C.36 | 0.000911 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | P.1.1 | 0.000318 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | P.1.2 | 0.001156 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | P.1.4 | 0.000977 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | P.1.7 | 0.000319 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | P.6 | 0.003145 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | P.7 | 0.004367 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | Q.2 | 0.000613 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | Q.3 | 0.000145 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | W.1 | 0.008696 |
noncoding | 29731 | A29731- | A | - | 1 | 1 | W.4 | 0.001351 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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