CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = noncoding : CodonNum = 29731

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
noncoding29731A29731-noncodingA-1383213832129731-29731
noncoding29731A29731GnoncodingAG407407129731-29731
noncoding29731A29731TnoncodingAT207207129731-29731
noncoding29731A29731CnoncodingAC4040129731-29731
noncoding29731A29731DnoncodingAD11129731-29731

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
noncoding29731A29731-A-1383213832All0.002646
noncoding29731A29731-A-37153715B.1.5250.420392
noncoding29731A29731-A-19171917B.1.1.70.001716
noncoding29731A29731-A-17541754B.1.1.3110.628223
noncoding29731A29731-A-834834AY.380.416375
noncoding29731A29731-A-563563AY.40.000876
noncoding29731A29731-A-411411B.1.617.20.001548
noncoding29731A29731GAG407407All0.000078
noncoding29731A29731-A-362362B.1.351.20.109531
noncoding29731A29731-A-287287AY.50.005926
noncoding29731A29731-A-284284AY.390.007018
noncoding29731A29731TAT207207All0.00004
noncoding29731A29731-A-188188B.1.5260.004419
noncoding29731A29731-A-175175B.10.001603
noncoding29731A29731-A-157157AY.1030.000975
noncoding29731A29731-A-147147B.1.1770.001936
noncoding29731A29731GAG135135B.1.1.70.000121
noncoding29731A29731-A-122122B.1.10.002213
noncoding29731A29731-A-109109AY.1200.004052
noncoding29731A29731-A-109109B.1.20.00096
noncoding29731A29731-A-109109B.1.4290.002565
noncoding29731A29731-A-102102AY.250.000614
noncoding29731A29731-A-101101P.10.001591
noncoding29731A29731-A-9797B.1.2210.00689
noncoding29731A29731-A-9696AY.730.063872
noncoding29731A29731-A-9494AY.430.000416
noncoding29731A29731-A-9393AY.470.002893
noncoding29731A29731-A-8484AY.420.003379
noncoding29731A29731-A-8484B.1.177.810.015903
noncoding29731A29731TAT8484B.1.5960.00732
noncoding29731A29731-A-7070AY.30.000696
noncoding29731A29731-A-6464B.1.1.5190.002541
noncoding29731A29731-A-6161B.1.1600.001902
noncoding29731A29731TAT5656B.1.20.000493
noncoding29731A29731-A-5151AY.440.00031
noncoding29731A29731-A-5050B.1.2430.003479
noncoding29731A29731-A-4646C.160.04878
noncoding29731A29731-A-4444B.1.177.240.056995
noncoding29731A29731GAG4141AY.250.000247
noncoding29731A29731-A-4141P.1.160.015339
noncoding29731A29731CAC4040All0.000008
noncoding29731A29731-A-3333B.1.3510.000981
noncoding29731A29731-A-3030R.10.0027
noncoding29731A29731-A-2828B.1.2580.001863
noncoding29731A29731-A-2727AY.260.000764
noncoding29731A29731-A-2727B.1.3460.035387
noncoding29731A29731-A-2525AY.290.000394
noncoding29731A29731-A-2525B.1.4270.001262
noncoding29731A29731-A-2323AY.1000.001058
noncoding29731A29731-A-2323AY.1020.00061
noncoding29731A29731-A-2323AY.4.20.000499
noncoding29731A29731-A-2222B.1.1.3680.067901
noncoding29731A29731-A-2121B.1.3050.045161
noncoding29731A29731-A-2020B.1.2890.053191
noncoding29731A29731-A-2020B.1.5750.006068
noncoding29731A29731-A-2020B.1.5960.001743
noncoding29731A29731-A-1919AY.920.005458
noncoding29731A29731-A-1818AY.200.0007
noncoding29731A29731-A-1818B.1.1.1720.327273
noncoding29731A29731-A-1818B.1.1.2220.003672
noncoding29731A29731-A-1818B.1.1.3070.04557
noncoding29731A29731-A-1818B.1.4040.023438
noncoding29731A29731-A-1818P.1.140.00086
noncoding29731A29731-A-1717B.1.6210.001505
noncoding29731A29731-A-1616AY.450.001947
noncoding29731A29731-A-1616AY.60.000658
noncoding29731A29731-A-1616B.1.1.2650.050473
noncoding29731A29731GAG1616B.310.059701
noncoding29731A29731-A-1515AY.1190.00053
noncoding29731A29731GAG1515B.1.3510.000446
noncoding29731A29731GAG1515B.1.5170.006405
noncoding29731A29731CAC1414AY.4.50.001505
noncoding29731A29731-A-1414B.1.36.10.015964
noncoding29731A29731-A-1414C.370.001625
noncoding29731A29731-A-1313AY.1180.000814
noncoding29731A29731-A-1313AY.9.10.001088
noncoding29731A29731GAG1313B.1.5260.000306
noncoding29731A29731GAG1212AY.430.000053
noncoding29731A29731-A-1212B.1.1.4160.01086
noncoding29731A29731-A-1212B.1.360.001751
noncoding29731A29731-A-1111AY.1170.00093
noncoding29731A29731-A-1111AY.740.001272
noncoding29731A29731-A-1111AY.9.20.000404
noncoding29731A29731-A-1111B.1.1.2140.00061
noncoding29731A29731-A-1111P.20.002053
noncoding29731A29731-A-1010AY.750.00056
noncoding29731A29731-A-1010B.1.1.250.005685
noncoding29731A29731-A-1010B.1.1.2790.011211
noncoding29731A29731-A-1010B.1.1.330.004209
noncoding29731A29731TAT1010B.1.1.70.000009
noncoding29731A29731-A-1010B.1.177.750.010406
noncoding29731A29731-A-1010B.1.36.290.005173
noncoding29731A29731-A-99AY.1140.00208
noncoding29731A29731GAG99AY.510.008182
noncoding29731A29731-A-99AY.610.000943
noncoding29731A29731-A-99B0.00115
noncoding29731A29731-A-99B.1.160.140.019068
noncoding29731A29731-A-99B.1.177.620.010727
noncoding29731A29731-A-99B.1.3980.026786
noncoding29731A29731-A-99B.1.4160.011421
noncoding29731A29731-A-88AY.230.000558
noncoding29731A29731GAG88AY.440.000049
noncoding29731A29731-A-88AY.46.40.001316
noncoding29731A29731-A-88AY.46.50.001587
noncoding29731A29731-A-88AY.46.60.000578
noncoding29731A29731-A-88B.1.1.1530.008762
noncoding29731A29731-A-88C.36.30.004538
noncoding29731A29731-A-77AY.75.10.001262
noncoding29731A29731-A-77AY.850.00299
noncoding29731A29731-A-77B.1.1.390.003568
noncoding29731A29731CAC77B.1.1.70.000006
noncoding29731A29731-A-77B.1.110.30.005029
noncoding29731A29731-A-77B.1.160.330.030973
noncoding29731A29731-A-77B.1.36.220.008454
noncoding29731A29731-A-77B.1.4990.007353
noncoding29731A29731GAG77B.1.5250.000792
noncoding29731A29731GAG77B.1.617.20.000026
noncoding29731A29731-A-77B.1.6230.003755
noncoding29731A29731GAG77P.10.00011
noncoding29731A29731-A-66AY.130.000966
noncoding29731A29731-A-66AY.140.000528
noncoding29731A29731-A-66AY.340.000582
noncoding29731A29731GAG66AY.40.000009
noncoding29731A29731GAG66AY.740.000694
noncoding29731A29731-A-66AY.99.20.000553
noncoding29731A29731TAT66B.10.000055
noncoding29731A29731-A-66B.1.1.3160.00555
noncoding29731A29731-A-66B.1.1.370.001157
noncoding29731A29731TAT66B.1.177.70.000989
noncoding29731A29731GAG66B.1.20.000053
noncoding29731A29731-A-66B.1.2400.001293
noncoding29731A29731-A-66B.1.4000.002574
noncoding29731A29731-A-66B.1.595.10.035088
noncoding29731A29731TAT66B.1.617.20.000023
noncoding29731A29731-A-66B.1.6370.000438
noncoding29731A29731-A-66D.20.00045
noncoding29731A29731-A-66N.40.025532
noncoding29731A29731-A-55A0.001935
noncoding29731A29731-A-55A.10.001409
noncoding29731A29731GAG55AY.1030.000031
noncoding29731A29731TAT55AY.250.00003
noncoding29731A29731-A-55AY.460.00052
noncoding29731A29731-A-55AY.540.000477
noncoding29731A29731-A-55AY.650.002665
noncoding29731A29731-A-55AY.98.10.000242
noncoding29731A29731-A-55B.1.1.280.001556
noncoding29731A29731-A-55B.1.1.3170.002058
noncoding29731A29731-A-55B.1.1.3180.001509
noncoding29731A29731GAG55B.1.1770.000066
noncoding29731A29731-A-55B.1.177.70.000824
noncoding29731A29731-A-55B.1.3890.00501
noncoding29731A29731-A-55B.1.4080.01845
noncoding29731A29731GAG55B.1.4290.000118
noncoding29731A29731TAT55B.1.5250.000566
noncoding29731A29731-A-55B.1.5950.001305
noncoding29731A29731-A-55B.1.6090.002397
noncoding29731A29731-A-55Q.10.000632
noncoding29731A29731GAG44AY.1200.000149
noncoding29731A29731CAC44AY.270.000259
noncoding29731A29731-A-44AY.300.001583
noncoding29731A29731-A-44AY.330.000267
noncoding29731A29731-A-44AY.360.000593
noncoding29731A29731-A-44AY.90.00027
noncoding29731A29731GAG44B.1.10.000073
noncoding29731A29731-A-44B.1.1.1890.006051
noncoding29731A29731-A-44B.1.1.3060.001754
noncoding29731A29731GAG44B.1.1.3220.035088
noncoding29731A29731-A-44B.1.1.4640.005891
noncoding29731A29731-A-44B.1.177.600.000874
noncoding29731A29731-A-44B.1.2340.000528
noncoding29731A29731-A-44B.1.258.170.000416
noncoding29731A29731-A-44B.1.5820.001963
noncoding29731A29731-A-44B.1.5880.00364
noncoding29731A29731-A-44B.400.001457
noncoding29731A29731-A-33AY.1090.002219
noncoding29731A29731-A-33AY.1100.000338
noncoding29731A29731-A-33AY.120.000948
noncoding29731A29731GAG33AY.230.000209
noncoding29731A29731GAG33AY.300.001187
noncoding29731A29731TAT33AY.430.000013
noncoding29731A29731-A-33AY.620.001307
noncoding29731A29731-A-33AY.70.000588
noncoding29731A29731GAG33AY.960.006224
noncoding29731A29731-A-33B.1.1.1920.006928
noncoding29731A29731-A-33B.1.1.2280.009146
noncoding29731A29731-A-33B.1.1.2360.02069
noncoding29731A29731-A-33B.1.1.3370.010791
noncoding29731A29731-A-33B.1.1.3970.006757
noncoding29731A29731-A-33B.1.1.4280.028302
noncoding29731A29731-A-33B.1.1.460.0131
noncoding29731A29731-A-33B.1.1.700.001023
noncoding29731A29731-A-33B.1.1450.157895
noncoding29731A29731-A-33B.1.177.180.00348
noncoding29731A29731GAG33B.1.2350.007557
noncoding29731A29731GAG33B.1.360.000438
noncoding29731A29731-A-33B.1.36.180.001261
noncoding29731A29731-A-33B.1.36.310.005254
noncoding29731A29731-A-33B.1.3960.002117
noncoding29731A29731-A-33B.1.3990.005803
noncoding29731A29731-A-33B.1.416.10.004687
noncoding29731A29731-A-33B.1.440.025
noncoding29731A29731-A-33B.1.466.20.001174
noncoding29731A29731-A-33B.1.5170.001281
noncoding29731A29731GAG33B.1.5750.00091
noncoding29731A29731-A-33B.1.617.10.000387
noncoding29731A29731GAG33B.60.00273
noncoding29731A29731-A-33P.1.150.000697
noncoding29731A29731-A-33P.1.170.000485
noncoding29731A29731-A-33Q.80.000495
noncoding29731A29731GAG22A.10.000564
noncoding29731A29731-A-22AD.20.000438
noncoding29731A29731TAT22AY.1020.000053
noncoding29731A29731-A-22AY.1060.00067
noncoding29731A29731TAT22AY.1110.000366
noncoding29731A29731-A-22AY.120.2.10.000997
noncoding29731A29731-A-22AY.190.002281
noncoding29731A29731GAG22AY.200.000078
noncoding29731A29731TAT22AY.230.000139
noncoding29731A29731-A-22AY.3.10.000171
noncoding29731A29731-A-22AY.350.000466
noncoding29731A29731GAG22AY.360.000296
noncoding29731A29731-A-22AY.39.10.000079
noncoding29731A29731-A-22AY.400.001929
noncoding29731A29731GAG22AY.460.000208
noncoding29731A29731-A-22AY.46.30.001867
noncoding29731A29731-A-22AY.5.30.000675
noncoding29731A29731GAG22AY.5.30.000675
noncoding29731A29731-A-22AY.5.40.000553
noncoding29731A29731-A-22AY.510.001818
noncoding29731A29731-A-22AY.560.00321
noncoding29731A29731-A-22AY.590.001059
noncoding29731A29731-A-22AY.840.000875
noncoding29731A29731-A-22AY.950.001522
noncoding29731A29731TAT22AY.980.000158
noncoding29731A29731CAC22B.10.000018
noncoding29731A29731GAG22B.10.000018
noncoding29731A29731-A-22B.1.1.10.000653
noncoding29731A29731GAG22B.1.1.1570.001826
noncoding29731A29731-A-22B.1.1.1700.002494
noncoding29731A29731GAG22B.1.1.1890.003026
noncoding29731A29731-A-22B.1.1.1940.009901
noncoding29731A29731TAT22B.1.1.2770.001517
noncoding29731A29731-A-22B.1.1.2840.000215
noncoding29731A29731-A-22B.1.1.3050.007722
noncoding29731A29731GAG22B.1.1.3060.000877
noncoding29731A29731-A-22B.1.1.3480.001592
noncoding29731A29731-A-22B.1.1.3540.008772
noncoding29731A29731-A-22B.1.1.3690.000892
noncoding29731A29731CAC22B.1.1.4160.00181
noncoding29731A29731-A-22B.1.1.4340.000697
noncoding29731A29731-A-22B.1.1.500.001358
noncoding29731A29731CAC22B.1.1.5190.000079
noncoding29731A29731-A-22B.1.1.5280.009615
noncoding29731A29731-A-22B.1.1.630.000772
noncoding29731A29731-A-22B.1.1110.00235
noncoding29731A29731GAG22B.1.1570.00597
noncoding29731A29731TAT22B.1.1600.000062
noncoding29731A29731-A-22B.1.160.320.008584
noncoding29731A29731-A-22B.1.177.320.002699
noncoding29731A29731-A-22B.1.177.500.00939
noncoding29731A29731-A-22B.1.177.870.001456
noncoding29731A29731-A-22B.1.2060.001631
noncoding29731A29731-A-22B.1.2100.004264
noncoding29731A29731-A-22B.1.230.012121
noncoding29731A29731-A-22B.1.2980.004228
noncoding29731A29731-A-22B.1.36.170.000988
noncoding29731A29731-A-22B.1.36.80.002
noncoding29731A29731-A-22B.1.3910.002255
noncoding29731A29731-A-22B.1.4360.002058
noncoding29731A29731-A-22B.1.4410.019231
noncoding29731A29731-A-22B.1.5090.001732
noncoding29731A29731-A-22B.1.5680.002222
noncoding29731A29731-A-22B.1.5760.001813
noncoding29731A29731-A-22B.1.6270.00404
noncoding29731A29731-A-22B.1.6280.000705
noncoding29731A29731GAG22B.1.6370.000146
noncoding29731A29731-A-22B.390.004662
noncoding29731A29731-A-22B.40.004415
noncoding29731A29731-A-22C.380.016129
noncoding29731A29731-A-22N.50.003534
noncoding29731A29731-A-22P.1.100.000539
noncoding29731A29731-A-22P.1.130.001797
noncoding29731A29731GAG22P.1.140.000096
noncoding29731A29731-A-22Q.40.00091
noncoding29731A29731GAG22Q.80.00033
noncoding29731A29731-A-11A.2.30.004739
noncoding29731A29731-A-11A.2.50.000499
noncoding29731A29731-A-11A.23.10.000704
noncoding29731A29731TAT11A.30.002096
noncoding29731A29731-A-11AK.20.045455
noncoding29731A29731DAD11All0
noncoding29731A29731-A-11AU.10.001266
noncoding29731A29731-A-11AY.100.00053
noncoding29731A29731GAG11AY.1020.000027
noncoding29731A29731TAT11AY.1030.000006
noncoding29731A29731CAC11AY.1040.001984
noncoding29731A29731-A-11AY.1050.000643
noncoding29731A29731-A-11AY.1080.001103
noncoding29731A29731-A-11AY.1110.000183
noncoding29731A29731GAG11AY.1140.000231
noncoding29731A29731GAG11AY.1190.000035
noncoding29731A29731GAG11AY.120.000316
noncoding29731A29731-A-11AY.120.10.000321
noncoding29731A29731-A-11AY.160.00038
noncoding29731A29731-A-11AY.270.000065
noncoding29731A29731-A-11AY.29.10.000221
noncoding29731A29731GAG11AY.30.00001
noncoding29731A29731GAG11AY.390.000025
noncoding29731A29731TAT11AY.39.10.00004
noncoding29731A29731TAT11AY.40.000002
noncoding29731A29731GAG11AY.4.20.000022
noncoding29731A29731GAG11AY.4.2.10.000149
noncoding29731A29731CAC11AY.430.000004
noncoding29731A29731TAT11AY.46.60.000072
noncoding29731A29731-A-11AY.480.000465
noncoding29731A29731GAG11AY.50.000021
noncoding29731A29731-A-11AY.520.000814
noncoding29731A29731-A-11AY.550.000917
noncoding29731A29731GAG11AY.590.00053
noncoding29731A29731-A-11AY.660.00107
noncoding29731A29731GAG11AY.670.000464
noncoding29731A29731TAT11AY.690.000187
noncoding29731A29731-A-11AY.810.001992
noncoding29731A29731-A-11AY.870.000833
noncoding29731A29731GAG11AY.90.000068
noncoding29731A29731TAT11AY.9.10.000084
noncoding29731A29731-A-11AY.910.00073
noncoding29731A29731GAG11AY.940.000443
noncoding29731A29731-A-11AY.940.000443
noncoding29731A29731-A-11AZ.10.000867
noncoding29731A29731GAG11B0.000128
noncoding29731A29731TAT11B.1.10.000018
noncoding29731A29731GAG11B.1.1.10.000327
noncoding29731A29731-A-11B.1.1.100.001115
noncoding29731A29731-A-11B.1.1.1740.003378
noncoding29731A29731-A-11B.1.1.1960.005714
noncoding29731A29731-A-11B.1.1.1970.037037
noncoding29731A29731-A-11B.1.1.1980.001468
noncoding29731A29731-A-11B.1.1.2160.00089
noncoding29731A29731-A-11B.1.1.2180.007692
noncoding29731A29731-A-11B.1.1.2290.005747
noncoding29731A29731GAG11B.1.1.2310.003096
noncoding29731A29731TAT11B.1.1.270.00565
noncoding29731A29731-A-11B.1.1.2770.000759
noncoding29731A29731GAG11B.1.1.280.000311
noncoding29731A29731-A-11B.1.1.2860.002899
noncoding29731A29731-A-11B.1.1.2940.001266
noncoding29731A29731-A-11B.1.1.2980.000862
noncoding29731A29731-A-11B.1.1.3390.010526
noncoding29731A29731-A-11B.1.1.3720.000689
noncoding29731A29731CAC11B.1.1.3890.006061
noncoding29731A29731-A-11B.1.1.3890.006061
noncoding29731A29731-A-11B.1.1.4320.001266
noncoding29731A29731-A-11B.1.1.470.005348
noncoding29731A29731GAG11B.1.1.4870.005587
noncoding29731A29731-A-11B.1.1.5170.006803
noncoding29731A29731GAG11B.1.1.5260.003546
noncoding29731A29731-A-11B.1.1.710.006061
noncoding29731A29731-A-11B.1.1390.000733
noncoding29731A29731CAC11B.1.177.350.000691
noncoding29731A29731-A-11B.1.177.440.000519
noncoding29731A29731GAG11B.1.177.440.000519
noncoding29731A29731-A-11B.1.177.510.004566
noncoding29731A29731-A-11B.1.177.530.002392
noncoding29731A29731-A-11B.1.177.570.000281
noncoding29731A29731-A-11B.1.177.60.000977
noncoding29731A29731-A-11B.1.177.650.000665
noncoding29731A29731-A-11B.1.177.860.000183
noncoding29731A29731-A-11B.1.1800.05
noncoding29731A29731-A-11B.1.1920.009259
noncoding29731A29731CAC11B.1.20.000009
noncoding29731A29731TAT11B.1.2210.000071
noncoding29731A29731-A-11B.1.2220.001692
noncoding29731A29731GAG11B.1.2320.000537
noncoding29731A29731-A-11B.1.2410.000812
noncoding29731A29731-A-11B.1.258.160.001637
noncoding29731A29731-A-11B.1.2910.019231
noncoding29731A29731-A-11B.1.3110.000275
noncoding29731A29731GAG11B.1.3490.000715
noncoding29731A29731-A-11B.1.351.30.000876
noncoding29731A29731TAT11B.1.360.000146
noncoding29731A29731-A-11B.1.36.190.009259
noncoding29731A29731TAT11B.1.36.200.016949
noncoding29731A29731TAT11B.1.3610.001289
noncoding29731A29731-A-11B.1.3620.001541
noncoding29731A29731-A-11B.1.3690.000285
noncoding29731A29731CAC11B.1.3710.001122
noncoding29731A29731TAT11B.1.3750.00082
noncoding29731A29731CAC11B.1.4160.001269
noncoding29731A29731-A-11B.1.4220.000812
noncoding29731A29731-A-11B.1.4430.004673
noncoding29731A29731GAG11B.1.4680.005714
noncoding29731A29731-A-11B.1.4700.001404
noncoding29731A29731-A-11B.1.4930.025641
noncoding29731A29731DAD11B.1.5250.000113
noncoding29731A29731GAG11B.1.5410.004425
noncoding29731A29731-A-11B.1.5510.00129
noncoding29731A29731-A-11B.1.5610.000397
noncoding29731A29731-A-11B.1.564.10.001577
noncoding29731A29731-A-11B.1.5970.00463
noncoding29731A29731-A-11B.1.6000.005848
noncoding29731A29731CAC11B.1.617.10.000129
noncoding29731A29731-A-11B.1.617.30.002985
noncoding29731A29731-A-11B.1.6190.000871
noncoding29731A29731-A-11B.1.6200.000946
noncoding29731A29731GAG11B.1.6280.000352
noncoding29731A29731-A-11B.1.6330.041667
noncoding29731A29731-A-11B.30.000831
noncoding29731A29731-A-11B.3.10.001658
noncoding29731A29731-A-11B.310.003731
noncoding29731A29731-A-11B.550.00295
noncoding29731A29731-A-11B.60.00091
noncoding29731A29731GAG11B.6.60.000889
noncoding29731A29731-A-11C.360.000911
noncoding29731A29731GAG11C.370.000116
noncoding29731A29731CAC11P.10.000016
noncoding29731A29731-A-11P.1.10.000318
noncoding29731A29731-A-11P.1.20.001156
noncoding29731A29731-A-11P.1.40.000977
noncoding29731A29731-A-11P.1.70.000319
noncoding29731A29731-A-11P.60.003145
noncoding29731A29731-A-11P.70.004367
noncoding29731A29731-A-11Q.20.000613
noncoding29731A29731-A-11Q.30.000145
noncoding29731A29731GAG11Q.40.000455
noncoding29731A29731GAG11R.10.00009
noncoding29731A29731-A-11W.10.008696
noncoding29731A29731GAG11W.40.001351
noncoding29731A29731-A-11W.40.001351