CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = noncoding : CodonNum = 29726

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
noncoding29726T29726-noncodingT-58705870129726-29726
noncoding29726T29726CnoncodingTC488488129726-29726
noncoding29726T29726AnoncodingTA6969129726-29726
noncoding29726T29726GnoncodingTG4949129726-29726

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
noncoding29726T29726-T-58705870All0.001123
noncoding29726T29726-T-11681168B.1.1.70.001046
noncoding29726T29726-T-10191019B.1.1.2980.878448
noncoding29726T29726-T-834834AY.380.416375
noncoding29726T29726CTC488488All0.000093
noncoding29726T29726-T-273273AY.50.005637
noncoding29726T29726-T-209209C.370.024257
noncoding29726T29726-T-197197AY.40.000307
noncoding29726T29726-T-197197B.1.5260.00463
noncoding29726T29726-T-9292B.1.4270.004646
noncoding29726T29726-T-8989B.1.20.000784
noncoding29726T29726CTC7878B.1.617.20.000294
noncoding29726T29726-T-7878B.1.617.20.000294
noncoding29726T29726-T-7373B.10.000669
noncoding29726T29726ATA6969All0.000013
noncoding29726T29726-T-6969B.1.1770.000909
noncoding29726T29726-T-6868P.10.001071
noncoding29726T29726-T-6767B.1.10.001215
noncoding29726T29726CTC6464AY.250.000385
noncoding29726T29726-T-6464AY.440.00039
noncoding29726T29726CTC6363B.1.1.70.000056
noncoding29726T29726-T-5757B.1.4160.072335
noncoding29726T29726GTG4949All0.000009
noncoding29726T29726-T-4545B.1.1.5190.001787
noncoding29726T29726CTC4343AY.430.000191
noncoding29726T29726-T-4040B.1.4290.000941
noncoding29726T29726-T-3939B.1.1.2140.002163
noncoding29726T29726-T-3636AY.290.000568
noncoding29726T29726-T-3636B.1.2430.002505
noncoding29726T29726-T-3535AY.250.000211
noncoding29726T29726-T-3535Q.10.004421
noncoding29726T29726ATA3232AY.250.000192
noncoding29726T29726-T-3030AY.1030.000186
noncoding29726T29726-T-3030B.1.1600.000936
noncoding29726T29726CTC2727AY.40.000042
noncoding29726T29726-T-2525B.1.2210.001776
noncoding29726T29726-T-2525N.100.735294
noncoding29726T29726CTC2424P.1.10.21
noncoding29726T29726-T-2323B.1.4040.029948
noncoding29726T29726-T-2323B.1.6370.001681
noncoding29726T29726-T-2121B.1.177.350.014513
noncoding29726T29726-T-2121P.1.140.001004
noncoding29726T29726-T-2020B.1.1.280.006225
noncoding29726T29726-T-2020B.1.1.460.087336
noncoding29726T29726-T-1919AY.920.005458
noncoding29726T29726-T-1818B.1.360.002626
noncoding29726T29726-T-1818C.36.30.01021
noncoding29726T29726-T-1717AY.430.000075
noncoding29726T29726-T-1717B.1.3690.004849
noncoding29726T29726-T-1717P.1.60.033074
noncoding29726T29726-T-1616AY.390.000395
noncoding29726T29726CTC1515AY.4.2.10.002235
noncoding29726T29726-T-1515B.1.3510.000446
noncoding29726T29726-T-1515P.20.0028
noncoding29726T29726-T-1313A.20.008604
noncoding29726T29726CTC1313AY.460.001353
noncoding29726T29726CTC1313AY.99.20.001198
noncoding29726T29726CTC1313B.1.1.2840.001396
noncoding29726T29726-T-1313B.1.1.330.005471
noncoding29726T29726-T-1212AY.30.000119
noncoding29726T29726-T-1212B.1.1.4160.01086
noncoding29726T29726ATA1212B.1.1.70.000011
noncoding29726T29726CTC1212B.1.5870.02277
noncoding29726T29726-T-1111AY.1140.002542
noncoding29726T29726-T-1111B.1.1.4330.01567
noncoding29726T29726-T-1111C.360.010018
noncoding29726T29726-T-1010AY.260.000283
noncoding29726T29726-T-1010B.1.2580.000665
noncoding29726T29726-T-1010B.1.6210.000885
noncoding29726T29726-T-99AY.450.001095
noncoding29726T29726-T-99B.1.3980.026786
noncoding29726T29726-T-99N.40.038298
noncoding29726T29726-T-88AY.1060.002679
noncoding29726T29726CTC88AY.390.000198
noncoding29726T29726CTC88B.1.20.00007
noncoding29726T29726-T-88B.1.4000.003432
noncoding29726T29726GTG77AY.250.000042
noncoding29726T29726CTC77AY.420.000282
noncoding29726T29726-T-77AY.470.000218
noncoding29726T29726-T-77AY.9.10.000586
noncoding29726T29726-T-77B0.000895
noncoding29726T29726-T-77B.1.1.1410.014085
noncoding29726T29726-T-77B.1.160.330.030973
noncoding29726T29726-T-77B.1.6300.036649
noncoding29726T29726CTC66AY.1020.000159
noncoding29726T29726-T-66AY.29.10.001323
noncoding29726T29726CTC66AY.440.000037
noncoding29726T29726-T-66AY.750.000336
noncoding29726T29726CTC66B.1.10.000109
noncoding29726T29726-T-66B.1.1.2180.046154
noncoding29726T29726-T-66B.1.1.3330.006459
noncoding29726T29726-T-66B.1.2340.000792
noncoding29726T29726-T-66B.1.5950.001566
noncoding29726T29726-T-66B.1.595.10.035088
noncoding29726T29726-T-66B.1.80.011834
noncoding29726T29726-T-66C.130.153846
noncoding29726T29726-T-55AY.1000.00023
noncoding29726T29726-T-55AY.1020.000133
noncoding29726T29726GTG55AY.1030.000031
noncoding29726T29726-T-55AY.610.000524
noncoding29726T29726-T-55B.1.1.1210.012136
noncoding29726T29726-T-55B.1.177.210.000382
noncoding29726T29726-T-55B.1.258.170.00052
noncoding29726T29726-T-55B.1.4080.01845
noncoding29726T29726-T-55B.1.5610.001985
noncoding29726T29726-T-55P.1.150.001162
noncoding29726T29726-T-55P.1.70.001596
noncoding29726T29726-T-55P.30.007974
noncoding29726T29726-T-55P.70.021834
noncoding29726T29726-T-55R.10.00045
noncoding29726T29726CTC44AY.1030.000025
noncoding29726T29726-T-44AY.1190.000141
noncoding29726T29726-T-44AY.200.000155
noncoding29726T29726-T-44AY.4.20.000087
noncoding29726T29726GTG44AY.430.000018
noncoding29726T29726-T-44AY.460.000416
noncoding29726T29726CTC44AY.46.60.000289
noncoding29726T29726GTG44AY.50.000083
noncoding29726T29726-T-44AY.650.002132
noncoding29726T29726-T-44AY.740.000463
noncoding29726T29726-T-44AY.9.20.000147
noncoding29726T29726-T-44AY.98.10.000194
noncoding29726T29726CTC44B.10.000037
noncoding29726T29726CTC44B.1.1.3180.001207
noncoding29726T29726-T-44B.1.1.4640.005891
noncoding29726T29726CTC44B.1.1770.000053
noncoding29726T29726-T-44B.1.177.810.000757
noncoding29726T29726-T-44B.1.4280.004082
noncoding29726T29726-T-44B.1.5250.000453
noncoding29726T29726-T-44B.1.617.10.000516
noncoding29726T29726CTC44P.10.000063
noncoding29726T29726-T-44P.1.160.001496
noncoding29726T29726-T-33A0.001161
noncoding29726T29726-T-33AY.1090.002219
noncoding29726T29726-T-33AY.140.000264
noncoding29726T29726CTC33AY.200.000117
noncoding29726T29726-T-33AY.240.001293
noncoding29726T29726-T-33AY.360.000445
noncoding29726T29726ATA33AY.40.000005
noncoding29726T29726CTC33AY.4.20.000065
noncoding29726T29726-T-33AY.400.002893
noncoding29726T29726-T-33AY.420.000121
noncoding29726T29726-T-33AY.540.000286
noncoding29726T29726-T-33AY.590.001589
noncoding29726T29726-T-33AY.75.10.000541
noncoding29726T29726-T-33AY.980.000237
noncoding29726T29726-T-33B.1.1.10.00098
noncoding29726T29726-T-33B.1.1.1890.004539
noncoding29726T29726-T-33B.1.1.1920.006928
noncoding29726T29726-T-33B.1.1.2160.002671
noncoding29726T29726-T-33B.1.1.3060.001315
noncoding29726T29726-T-33B.1.1.3620.016854
noncoding29726T29726-T-33B.1.1.390.001529
noncoding29726T29726-T-33B.1.1.500.002037
noncoding29726T29726GTG33B.1.1.70.000003
noncoding29726T29726-T-33B.1.1450.157895
noncoding29726T29726GTG33B.1.1600.000094
noncoding29726T29726-T-33B.1.177.620.003576
noncoding29726T29726ATA33B.1.20.000026
noncoding29726T29726-T-33B.1.2320.001612
noncoding29726T29726-T-33B.1.36.170.001482
noncoding29726T29726-T-33B.1.36.290.001552
noncoding29726T29726CTC33B.1.4290.000071
noncoding29726T29726-T-33B.1.438.10.000322
noncoding29726T29726-T-33B.1.440.025
noncoding29726T29726-T-33B.1.4800.007463
noncoding29726T29726-T-33B.1.5820.001472
noncoding29726T29726-T-33B.1.5960.000261
noncoding29726T29726-T-33C.180.007772
noncoding29726T29726CTC33P.1.150.000697
noncoding29726T29726-T-33Q.40.001364
noncoding29726T29726-T-22A.10.000564
noncoding29726T29726-T-22AD.20.000438
noncoding29726T29726CTC22AY.1160.000574
noncoding29726T29726-T-22AY.1200.000074
noncoding29726T29726-T-22AY.16.10.00094
noncoding29726T29726-T-22AY.20.000712
noncoding29726T29726CTC22AY.260.000057
noncoding29726T29726-T-22AY.3.10.000171
noncoding29726T29726CTC22AY.360.000296
noncoding29726T29726GTG22AY.40.000003
noncoding29726T29726-T-22AY.46.60.000144
noncoding29726T29726-T-22AY.5.30.000675
noncoding29726T29726-T-22AY.560.00321
noncoding29726T29726-T-22AY.710.00095
noncoding29726T29726-T-22AY.840.000875
noncoding29726T29726ATA22B.10.000018
noncoding29726T29726GTG22B.10.000018
noncoding29726T29726CTC22B.1.1.2160.001781
noncoding29726T29726-T-22B.1.1.2220.000408
noncoding29726T29726-T-22B.1.1.3480.001592
noncoding29726T29726-T-22B.1.1.3540.008772
noncoding29726T29726-T-22B.1.1.3680.006173
noncoding29726T29726-T-22B.1.1.3760.011905
noncoding29726T29726-T-22B.1.1.3850.008929
noncoding29726T29726-T-22B.1.1.3890.012121
noncoding29726T29726-T-22B.1.1.4320.002532
noncoding29726T29726-T-22B.1.177.120.000303
noncoding29726T29726-T-22B.1.177.380.020833
noncoding29726T29726-T-22B.1.177.570.000562
noncoding29726T29726-T-22B.1.177.790.004684
noncoding29726T29726-T-22B.1.1800.1
noncoding29726T29726-T-22B.1.2060.001631
noncoding29726T29726-T-22B.1.2400.000431
noncoding29726T29726-T-22B.1.2410.001623
noncoding29726T29726ATA22B.1.2430.000139
noncoding29726T29726CTC22B.1.2580.000133
noncoding29726T29726-T-22B.1.2980.004228
noncoding29726T29726-T-22B.1.3050.004301
noncoding29726T29726CTC22B.1.3510.000059
noncoding29726T29726-T-22B.1.36.250.004415
noncoding29726T29726CTC22B.1.36.290.001035
noncoding29726T29726-T-22B.1.36.310.003503
noncoding29726T29726-T-22B.1.36.80.002
noncoding29726T29726-T-22B.1.3960.001411
noncoding29726T29726CTC22B.1.4160.002538
noncoding29726T29726-T-22B.1.4410.019231
noncoding29726T29726-T-22B.1.5170.000854
noncoding29726T29726GTG22B.1.617.20.000008
noncoding29726T29726ATA22B.1.6370.000146
noncoding29726T29726-T-22B.390.004662
noncoding29726T29726GTG22C.370.000232
noncoding29726T29726-T-22C.37.10.005236
noncoding29726T29726-T-22P.1.120.000968
noncoding29726T29726-T-22Q.30.00029
noncoding29726T29726-T-11A.2.50.000499
noncoding29726T29726-T-11A.23.10.000704
noncoding29726T29726-T-11AH.30.003802
noncoding29726T29726-T-11AY.100.00053
noncoding29726T29726-T-11AY.1080.001103
noncoding29726T29726CTC11AY.1100.000113
noncoding29726T29726-T-11AY.1110.000183
noncoding29726T29726CTC11AY.1140.000231
noncoding29726T29726-T-11AY.1170.000085
noncoding29726T29726CTC11AY.1170.000085
noncoding29726T29726GTG11AY.1190.000035
noncoding29726T29726CTC11AY.1200.000037
noncoding29726T29726-T-11AY.120.2.10.000498
noncoding29726T29726-T-11AY.130.000161
noncoding29726T29726ATA11AY.140.000088
noncoding29726T29726-T-11AY.160.00038
noncoding29726T29726ATA11AY.230.00007
noncoding29726T29726-T-11AY.230.00007
noncoding29726T29726CTC11AY.23.10.000417
noncoding29726T29726CTC11AY.240.000431
noncoding29726T29726ATA11AY.260.000028
noncoding29726T29726CTC11AY.290.000016
noncoding29726T29726-T-11AY.330.000067
noncoding29726T29726-T-11AY.340.000097
noncoding29726T29726ATA11AY.390.000025
noncoding29726T29726-T-11AY.39.10.00004
noncoding29726T29726GTG11AY.4.20.000022
noncoding29726T29726CTC11AY.4.50.000107
noncoding29726T29726ATA11AY.440.000006
noncoding29726T29726GTG11AY.440.000006
noncoding29726T29726-T-11AY.46.30.000934
noncoding29726T29726-T-11AY.46.50.000198
noncoding29726T29726-T-11AY.480.000465
noncoding29726T29726ATA11AY.50.000021
noncoding29726T29726CTC11AY.5.40.000277
noncoding29726T29726-T-11AY.5.40.000277
noncoding29726T29726CTC11AY.510.000909
noncoding29726T29726-T-11AY.520.000814
noncoding29726T29726CTC11AY.530.000288
noncoding29726T29726CTC11AY.60.000041
noncoding29726T29726-T-11AY.620.000436
noncoding29726T29726GTG11AY.690.000187
noncoding29726T29726GTG11AY.70.000196
noncoding29726T29726-T-11AY.70.000196
noncoding29726T29726CTC11AY.710.000475
noncoding29726T29726CTC11AY.740.000116
noncoding29726T29726-T-11AY.810.001992
noncoding29726T29726CTC11AY.850.000427
noncoding29726T29726-T-11AY.870.000833
noncoding29726T29726-T-11AY.890.004902
noncoding29726T29726-T-11AY.90.000068
noncoding29726T29726GTG11AY.9.10.000084
noncoding29726T29726-T-11AY.910.00073
noncoding29726T29726CTC11AY.920.000287
noncoding29726T29726-T-11AY.940.000443
noncoding29726T29726-T-11AY.99.20.000092
noncoding29726T29726-T-11AZ.50.003509
noncoding29726T29726-T-11B.1.1.1570.000913
noncoding29726T29726-T-11B.1.1.1610.003534
noncoding29726T29726-T-11B.1.1.1940.00495
noncoding29726T29726-T-11B.1.1.1970.037037
noncoding29726T29726-T-11B.1.1.2100.005714
noncoding29726T29726CTC11B.1.1.2220.000204
noncoding29726T29726-T-11B.1.1.250.000569
noncoding29726T29726-T-11B.1.1.2770.000759
noncoding29726T29726GTG11B.1.1.280.000311
noncoding29726T29726-T-11B.1.1.2840.000107
noncoding29726T29726-T-11B.1.1.2880.001916
noncoding29726T29726-T-11B.1.1.3110.000358
noncoding29726T29726-T-11B.1.1.3120.001912
noncoding29726T29726-T-11B.1.1.3170.000412
noncoding29726T29726-T-11B.1.1.3180.000302
noncoding29726T29726-T-11B.1.1.3260.001761
noncoding29726T29726-T-11B.1.1.3630.005988
noncoding29726T29726-T-11B.1.1.370.000193
noncoding29726T29726-T-11B.1.1.3720.000689
noncoding29726T29726-T-11B.1.1.3740.002375
noncoding29726T29726-T-11B.1.1.4210.030303
noncoding29726T29726-T-11B.1.1.4340.000349
noncoding29726T29726-T-11B.1.1.440.00241
noncoding29726T29726-T-11B.1.1.470.005348
noncoding29726T29726-T-11B.1.1.5170.006803
noncoding29726T29726GTG11B.1.1.5190.00004
noncoding29726T29726-T-11B.1.1.520.012195
noncoding29726T29726-T-11B.1.1.5210.005348
noncoding29726T29726-T-11B.1.1.5230.001563
noncoding29726T29726-T-11B.1.1.5260.003546
noncoding29726T29726-T-11B.1.1.5280.004808
noncoding29726T29726ATA11B.1.1.700.000341
noncoding29726T29726-T-11B.1.1.700.000341
noncoding29726T29726-T-11B.1.1.860.035714
noncoding29726T29726-T-11B.1.1.930.025641
noncoding29726T29726-T-11B.1.110.30.000718
noncoding29726T29726-T-11B.1.1110.001175
noncoding29726T29726-T-11B.1.1180.006711
noncoding29726T29726-T-11B.1.1200.007692
noncoding29726T29726-T-11B.1.1280.000635
noncoding29726T29726-T-11B.1.1390.000733
noncoding29726T29726ATA11B.1.1600.000031
noncoding29726T29726-T-11B.1.160.220.006757
noncoding29726T29726-T-11B.1.160.300.002976
noncoding29726T29726-T-11B.1.160.320.004292
noncoding29726T29726GTG11B.1.177.120.000152
noncoding29726T29726-T-11B.1.177.320.00135
noncoding29726T29726CTC11B.1.177.40.000211
noncoding29726T29726-T-11B.1.177.450.000381
noncoding29726T29726-T-11B.1.177.600.000218
noncoding29726T29726GTG11B.1.177.620.001192
noncoding29726T29726GTG11B.1.177.630.002703
noncoding29726T29726-T-11B.1.1920.009259
noncoding29726T29726-T-11B.1.2100.002132
noncoding29726T29726-T-11B.1.214.10.02
noncoding29726T29726-T-11B.1.220.001318
noncoding29726T29726ATA11B.1.221.10.002907
noncoding29726T29726CTC11B.1.221.30.000833
noncoding29726T29726-T-11B.1.2220.001692
noncoding29726T29726CTC11B.1.2430.00007
noncoding29726T29726-T-11B.1.258.160.001637
noncoding29726T29726-T-11B.1.258.90.005
noncoding29726T29726-T-11B.1.2910.019231
noncoding29726T29726CTC11B.1.3110.000275
noncoding29726T29726-T-11B.1.3460.001311
noncoding29726T29726GTG11B.1.3510.00003
noncoding29726T29726CTC11B.1.351.20.000303
noncoding29726T29726CTC11B.1.360.000146
noncoding29726T29726-T-11B.1.36.160.001425
noncoding29726T29726-T-11B.1.36.190.009259
noncoding29726T29726-T-11B.1.36.380.001642
noncoding29726T29726-T-11B.1.3800.006623
noncoding29726T29726-T-11B.1.3970.004854
noncoding29726T29726CTC11B.1.3980.002976
noncoding29726T29726ATA11B.1.4270.00005
noncoding29726T29726CTC11B.1.438.10.000107
noncoding29726T29726GTG11B.1.4410.009615
noncoding29726T29726-T-11B.1.4430.004673
noncoding29726T29726-T-11B.1.4650.003802
noncoding29726T29726-T-11B.1.466.20.000391
noncoding29726T29726-T-11B.1.4710.002732
noncoding29726T29726-T-11B.1.4970.000315
noncoding29726T29726CTC11B.1.4990.00105
noncoding29726T29726-T-11B.1.5090.000866
noncoding29726T29726GTG11B.1.5170.000427
noncoding29726T29726-T-11B.1.5330.009615
noncoding29726T29726-T-11B.1.5640.000426
noncoding29726T29726-T-11B.1.564.10.001577
noncoding29726T29726-T-11B.1.5650.00081
noncoding29726T29726-T-11B.1.5660.019231
noncoding29726T29726-T-11B.1.5760.000907
noncoding29726T29726ATA11B.1.5880.00091
noncoding29726T29726-T-11B.1.5880.00091
noncoding29726T29726-T-11B.1.5970.00463
noncoding29726T29726-T-11B.1.617.30.002985
noncoding29726T29726-T-11B.1.6200.000946
noncoding29726T29726CTC11B.1.6210.000089
noncoding29726T29726-T-11B.1.6230.000536
noncoding29726T29726-T-11B.1.6280.000352
noncoding29726T29726-T-11B.1.9.40.006135
noncoding29726T29726-T-11B.1.910.002075
noncoding29726T29726-T-11B.310.003731
noncoding29726T29726-T-11B.60.00091
noncoding29726T29726-T-11C.10.002392
noncoding29726T29726GTG11C.10.002392
noncoding29726T29726-T-11C.220.071429
noncoding29726T29726CTC11C.370.000116
noncoding29726T29726CTC11C.380.008065
noncoding29726T29726-T-11D.20.000075
noncoding29726T29726-T-11N.50.001767
noncoding29726T29726ATA11N.90.005952
noncoding29726T29726ATA11P.10.000016
noncoding29726T29726-T-11P.1.170.000162
noncoding29726T29726-T-11P.1.20.001156
noncoding29726T29726-T-11P.60.003145
noncoding29726T29726CTC11U.20.008772
noncoding29726T29726-T-11W.40.001351