CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = noncoding : CodonNum = 29719

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
noncoding29719C29719TnoncodingCT62376237129719-29719
noncoding29719C29719-noncodingC-12521252129719-29719
noncoding29719C29719AnoncodingCA376376129719-29719
noncoding29719C29719GnoncodingCG3939129719-29719

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
noncoding29719C29719TCT62376237All0.001193
noncoding29719C29719TCT31583158B.1.5750.958131
noncoding29719C29719-C-12521252All0.000239
noncoding29719C29719-C-833833AY.380.415876
noncoding29719C29719TCT491491B.1.1.70.00044
noncoding29719C29719ACA376376All0.000072
noncoding29719C29719TCT361361B.1.575.10.880488
noncoding29719C29719TCT316316AY.40.000492
noncoding29719C29719TCT204204B.1.575.20.980769
noncoding29719C29719TCT196196B.1.617.20.000738
noncoding29719C29719TCT101101B.10.000925
noncoding29719C29719TCT9898AY.440.000597
noncoding29719C29719TCT8787AY.4.20.001887
noncoding29719C29719ACA8181AY.1200.003011
noncoding29719C29719TCT7979AY.610.008277
noncoding29719C29719TCT7676B.1.5260.001786
noncoding29719C29719TCT5757AY.380.028457
noncoding29719C29719ACA5555B.1.617.20.000207
noncoding29719C29719TCT5151AY.1030.000317
noncoding29719C29719-C-5151B.1.1.70.000046
noncoding29719C29719TCT4848AY.430.000213
noncoding29719C29719TCT4747AY.30.000467
noncoding29719C29719TCT4646B.1.20.000405
noncoding29719C29719ACA4545AY.430.000199
noncoding29719C29719GCG3939All0.000007
noncoding29719C29719TCT3939P.10.000614
noncoding29719C29719TCT3333AY.290.000521
noncoding29719C29719TCT3232AY.1020.000848
noncoding29719C29719ACA3131B.1.10.000562
noncoding29719C29719-C-3030AY.40.000047
noncoding29719C29719TCT2727B.1.5950.007046
noncoding29719C29719TCT2626B.1.6210.002301
noncoding29719C29719TCT2525B.1.4270.001262
noncoding29719C29719TCT2424AY.260.000679
noncoding29719C29719ACA2424AY.290.000379
noncoding29719C29719ACA2323B.1.1.70.000021
noncoding29719C29719-C-2323B.1.617.20.000087
noncoding29719C29719TCT2222AY.410.006467
noncoding29719C29719ACA2121AY.460.002186
noncoding29719C29719TCT2020Q.10.002527
noncoding29719C29719-C-1919AY.920.005458
noncoding29719C29719TCT1919B.1.1.2910.014105
noncoding29719C29719TCT1919B.1.5650.015397
noncoding29719C29719TCT1818AY.200.0007
noncoding29719C29719TCT1717B.1.177.710.171717
noncoding29719C29719TCT1717B.1.4290.0004
noncoding29719C29719ACA1616AY.1030.000099
noncoding29719C29719-C-1616AY.290.000252
noncoding29719C29719ACA1616AY.40.000025
noncoding29719C29719TCT1616B.1.2210.001137
noncoding29719C29719TCT1515B.1.1770.000198
noncoding29719C29719TCT1414B.1.10.000254
noncoding29719C29719TCT1313AY.98.10.00063
noncoding29719C29719-C-1212AY.250.000072
noncoding29719C29719TCT1212AY.250.000072
noncoding29719C29719TCT1212B.1.5960.001046
noncoding29719C29719-C-1111AY.440.000067
noncoding29719C29719TCT1111AY.9.20.000404
noncoding29719C29719TCT1111B.1.177.860.002018
noncoding29719C29719GCG1111B.1.360.001605
noncoding29719C29719TCT1010AY.390.000247
noncoding29719C29719TCT1010AY.46.60.000722
noncoding29719C29719-C-1010B.10.000092
noncoding29719C29719TCT1010B.1.1.5190.000397
noncoding29719C29719TCT1010B.1.2580.000665
noncoding29719C29719TCT1010P.1.120.00484
noncoding29719C29719ACA99AY.260.000255
noncoding29719C29719ACA99AY.270.000582
noncoding29719C29719-C-99AY.30.00009
noncoding29719C29719-C-99AY.390.000222
noncoding29719C29719TCT99B.1.1.2190.045
noncoding29719C29719TCT99P.1.140.00043
noncoding29719C29719TCT88AY.1190.000282
noncoding29719C29719TCT88AY.330.000534
noncoding29719C29719-C-88B.1.10.000145
noncoding29719C29719TCT88B.1.1600.00025
noncoding29719C29719TCT88B.1.2340.001056
noncoding29719C29719-C-88B.1.4290.000188
noncoding29719C29719TCT77AY.34.10.00357
noncoding29719C29719TCT77AY.60.000288
noncoding29719C29719-C-77B.1.160.330.030973
noncoding29719C29719GCG77B.1.1770.000092
noncoding29719C29719-C-77B.1.360.001021
noncoding29719C29719TCT77B.1.360.001021
noncoding29719C29719TCT77B.1.6370.000512
noncoding29719C29719TCT77D.20.000525
noncoding29719C29719-C-77P.10.00011
noncoding29719C29719-C-66AY.1030.000037
noncoding29719C29719-C-66AY.430.000027
noncoding29719C29719TCT66AY.46.10.00616
noncoding29719C29719-C-66AY.750.000336
noncoding29719C29719-C-66B.1.20.000053
noncoding29719C29719TCT66B.1.621.10.003035
noncoding29719C29719TCT55AY.130.000805
noncoding29719C29719GCG55AY.260.000142
noncoding29719C29719TCT55AY.420.000201
noncoding29719C29719-C-55AY.450.000608
noncoding29719C29719-C-55AY.470.000156
noncoding29719C29719ACA55AY.60.000206
noncoding29719C29719-C-55B.1.1600.000156
noncoding29719C29719TCT55B.1.2100.010661
noncoding29719C29719TCT55B.1.3510.000149
noncoding29719C29719TCT55B.1.4040.00651
noncoding29719C29719-C-55B.1.4080.01845
noncoding29719C29719-C-55B.1.4270.000252
noncoding29719C29719TCT55B.1.6230.002682
noncoding29719C29719TCT44AY.1200.000149
noncoding29719C29719-C-44AY.230.000279
noncoding29719C29719ACA44AY.350.000932
noncoding29719C29719TCT44AY.360.000593
noncoding29719C29719-C-44AY.50.000083
noncoding29719C29719ACA44B.10.000037
noncoding29719C29719TCT44B.1.1.460.017467
noncoding29719C29719TCT44B.1.1.5210.02139
noncoding29719C29719-C-44B.1.1770.000053
noncoding29719C29719TCT33AY.1000.000138
noncoding29719C29719-C-33AY.1020.00008
noncoding29719C29719-C-33AY.1090.002219
noncoding29719C29719-C-33AY.1190.000106
noncoding29719C29719TCT33AY.120.000948
noncoding29719C29719TCT33AY.3.10.000256
noncoding29719C29719TCT33AY.50.000062
noncoding29719C29719ACA33AY.5.30.001012
noncoding29719C29719TCT33AY.510.002727
noncoding29719C29719-C-33AY.540.000286
noncoding29719C29719-C-33AY.610.000314
noncoding29719C29719-C-33AY.650.001599
noncoding29719C29719TCT33AY.7.20.001678
noncoding29719C29719-C-33AY.75.10.000541
noncoding29719C29719-C-33B0.000383
noncoding29719C29719TCT33B.1.1.3060.001315
noncoding29719C29719TCT33B.1.1.3330.003229
noncoding29719C29719-C-33B.1.1.460.0131
noncoding29719C29719ACA33B.1.20.000026
noncoding29719C29719-C-33B.1.2210.000213
noncoding29719C29719TCT33B.1.36.290.001552
noncoding29719C29719-C-33B.1.440.025
noncoding29719C29719TCT33B.1.5610.001191
noncoding29719C29719-C-33B.1.5950.000783
noncoding29719C29719TCT33B.1.6100.010638
noncoding29719C29719TCT33B.550.00885
noncoding29719C29719-C-33C.370.000348
noncoding29719C29719GCG220.111111
noncoding29719C29719TCT22A0.000774
noncoding29719C29719-C-22A0.000774
noncoding29719C29719TCT22AF.10.074074
noncoding29719C29719GCG22AY.1030.000012
noncoding29719C29719TCT22AY.1060.00067
noncoding29719C29719TCT22AY.1080.002205
noncoding29719C29719TCT22AY.1100.000225
noncoding29719C29719TCT22AY.1140.000462
noncoding29719C29719-C-22AY.1140.000462
noncoding29719C29719TCT22AY.1210.000271
noncoding29719C29719TCT22AY.140.000176
noncoding29719C29719-C-22AY.200.000078
noncoding29719C29719TCT22AY.230.000139
noncoding29719C29719ACA22AY.30.00002
noncoding29719C29719ACA22AY.330.000134
noncoding29719C29719TCT22AY.340.000194
noncoding29719C29719TCT22AY.370.000632
noncoding29719C29719TCT22AY.46.30.001867
noncoding29719C29719-C-22AY.5.30.000675
noncoding29719C29719TCT22AY.520.001629
noncoding29719C29719ACA22AY.530.000575
noncoding29719C29719TCT22AY.580.001815
noncoding29719C29719TCT22AY.600.001876
noncoding29719C29719TCT22AY.650.001066
noncoding29719C29719ACA22AY.680.000547
noncoding29719C29719-C-22AY.70.000392
noncoding29719C29719-C-22AY.740.000231
noncoding29719C29719TCT22AY.750.000112
noncoding29719C29719TCT22AY.75.10.000361
noncoding29719C29719-C-22AY.840.000875
noncoding29719C29719TCT22AY.90.000135
noncoding29719C29719-C-22AY.9.20.000073
noncoding29719C29719TCT22AY.980.000158
noncoding29719C29719TCT22B0.000256
noncoding29719C29719GCG22B.10.000018
noncoding29719C29719-C-22B.1.1.1940.009901
noncoding29719C29719TCT22B.1.1.2980.001724
noncoding29719C29719TCT22B.1.1.3260.003521
noncoding29719C29719-C-22B.1.1.3480.001592
noncoding29719C29719TCT22B.1.1.700.000682
noncoding29719C29719TCT22B.1.110.30.001437
noncoding29719C29719TCT22B.1.177.150.001262
noncoding29719C29719TCT22B.1.177.730.001133
noncoding29719C29719TCT22B.1.2060.001631
noncoding29719C29719-C-22B.1.2100.004264
noncoding29719C29719-C-22B.1.2400.000431
noncoding29719C29719TCT22B.1.3110.000549
noncoding29719C29719TCT22B.1.36.80.002
noncoding29719C29719TCT22B.1.3960.001411
noncoding29719C29719TCT22B.1.466.20.000782
noncoding29719C29719TCT22B.1.5170.000854
noncoding29719C29719TCT22B.1.617.10.000258
noncoding29719C29719GCG22B.1.617.20.000008
noncoding29719C29719-C-22B.1.6210.000177
noncoding29719C29719TCT22B.1.930.001867
noncoding29719C29719-C-22B.390.004662
noncoding29719C29719ACA22C.370.000232
noncoding29719C29719ACA22P.10.000032
noncoding29719C29719-C-22P.1.150.000465
noncoding29719C29719TCT11A.20.000662
noncoding29719C29719-C-11AD.20.000219
noncoding29719C29719TCT11AY.10.000396
noncoding29719C29719TCT11AY.100.00053
noncoding29719C29719-C-11AY.100.00053
noncoding29719C29719TCT11AY.1050.000643
noncoding29719C29719TCT11AY.1090.00074
noncoding29719C29719-C-11AY.1110.000183
noncoding29719C29719ACA11AY.1130.000142
noncoding29719C29719TCT11AY.1130.000142
noncoding29719C29719TCT11AY.116.10.000311
noncoding29719C29719-C-11AY.1170.000085
noncoding29719C29719ACA11AY.1170.000085
noncoding29719C29719ACA11AY.1190.000035
noncoding29719C29719-C-11AY.1200.000037
noncoding29719C29719-C-11AY.120.2.10.000498
noncoding29719C29719-C-11AY.140.000088
noncoding29719C29719TCT11AY.16.10.00047
noncoding29719C29719ACA11AY.230.00007
noncoding29719C29719-C-11AY.260.000028
noncoding29719C29719TCT11AY.270.000065
noncoding29719C29719-C-11AY.3.10.000085
noncoding29719C29719GCG11AY.300.000396
noncoding29719C29719-C-11AY.340.000097
noncoding29719C29719ACA11AY.34.10.00051
noncoding29719C29719ACA11AY.360.000148
noncoding29719C29719ACA11AY.390.000025
noncoding29719C29719TCT11AY.39.10.00004
noncoding29719C29719GCG11AY.40.000002
noncoding29719C29719TCT11AY.4.2.10.000149
noncoding29719C29719TCT11AY.4.30.000842
noncoding29719C29719-C-11AY.400.000964
noncoding29719C29719-C-11AY.420.00004
noncoding29719C29719GCG11AY.440.000006
noncoding29719C29719-C-11AY.460.000104
noncoding29719C29719TCT11AY.460.000104
noncoding29719C29719-C-11AY.46.30.000934
noncoding29719C29719-C-11AY.46.60.000072
noncoding29719C29719TCT11AY.470.000031
noncoding29719C29719TCT11AY.5.20.002463
noncoding29719C29719-C-11AY.5.40.000277
noncoding29719C29719-C-11AY.520.000814
noncoding29719C29719TCT11AY.540.000095
noncoding29719C29719-C-11AY.560.001605
noncoding29719C29719-C-11AY.620.000436
noncoding29719C29719TCT11AY.660.00107
noncoding29719C29719TCT11AY.670.000464
noncoding29719C29719ACA11AY.690.000187
noncoding29719C29719-C-11AY.7.10.000113
noncoding29719C29719TCT11AY.780.001541
noncoding29719C29719-C-11AY.810.001992
noncoding29719C29719TCT11AY.820.001357
noncoding29719C29719TCT11AY.840.000437
noncoding29719C29719TCT11AY.850.000427
noncoding29719C29719-C-11AY.870.000833
noncoding29719C29719TCT11AY.890.004902
noncoding29719C29719-C-11AY.9.10.000084
noncoding29719C29719-C-11AY.910.00073
noncoding29719C29719ACA11AY.910.00073
noncoding29719C29719-C-11AY.940.000443
noncoding29719C29719TCT11AY.970.001701
noncoding29719C29719TCT11AY.99.10.001553
noncoding29719C29719GCG11AY.99.20.000092
noncoding29719C29719-C-11AY.99.20.000092
noncoding29719C29719TCT11AY.99.20.000092
noncoding29719C29719-C-11AZ.20.000821
noncoding29719C29719TCT11B.1.1.1890.001513
noncoding29719C29719TCT11B.1.1.1940.00495
noncoding29719C29719-C-11B.1.1.1970.037037
noncoding29719C29719-C-11B.1.1.2140.000055
noncoding29719C29719TCT11B.1.1.2140.000055
noncoding29719C29719TCT11B.1.1.2160.00089
noncoding29719C29719-C-11B.1.1.2180.007692
noncoding29719C29719-C-11B.1.1.2220.000204
noncoding29719C29719-C-11B.1.1.2770.000759
noncoding29719C29719TCT11B.1.1.280.000311
noncoding29719C29719-C-11B.1.1.280.000311
noncoding29719C29719-C-11B.1.1.3050.003861
noncoding29719C29719-C-11B.1.1.3060.000438
noncoding29719C29719TCT11B.1.1.3110.000358
noncoding29719C29719TCT11B.1.1.3160.000925
noncoding29719C29719TCT11B.1.1.3220.008772
noncoding29719C29719-C-11B.1.1.330.000421
noncoding29719C29719TCT11B.1.1.330.000421
noncoding29719C29719TCT11B.1.1.3680.003086
noncoding29719C29719-C-11B.1.1.3810.04
noncoding29719C29719TCT11B.1.1.3890.006061
noncoding29719C29719-C-11B.1.1.390.00051
noncoding29719C29719TCT11B.1.1.4090.002833
noncoding29719C29719TCT11B.1.1.4190.007407
noncoding29719C29719-C-11B.1.1.5230.001563
noncoding29719C29719GCG11B.1.1.70.000001
noncoding29719C29719TCT11B.1.177.120.000152
noncoding29719C29719TCT11B.1.177.160.000664
noncoding29719C29719TCT11B.1.177.170.000821
noncoding29719C29719TCT11B.1.177.30.007634
noncoding29719C29719TCT11B.1.177.330.001645
noncoding29719C29719TCT11B.1.177.450.000381
noncoding29719C29719-C-11B.1.177.630.002703
noncoding29719C29719ACA11B.1.177.730.000566
noncoding29719C29719TCT11B.1.177.870.000728
noncoding29719C29719GCG11B.1.20.000009
noncoding29719C29719-C-11B.1.2060.000816
noncoding29719C29719-C-11B.1.2220.001692
noncoding29719C29719TCT11B.1.2320.000537
noncoding29719C29719-C-11B.1.2580.000067
noncoding29719C29719-C-11B.1.258.160.001637
noncoding29719C29719TCT11B.1.2790.000514
noncoding29719C29719-C-11B.1.2980.002114
noncoding29719C29719TCT11B.1.3140.007519
noncoding29719C29719ACA11B.1.3490.000715
noncoding29719C29719GCG11B.1.3510.00003
noncoding29719C29719TCT11B.1.351.50.0006
noncoding29719C29719-C-11B.1.36.310.001751
noncoding29719C29719-C-11B.1.36.380.001642
noncoding29719C29719TCT11B.1.36.390.002217
noncoding29719C29719-C-11B.1.36.80.001
noncoding29719C29719TCT11B.1.3610.001289
noncoding29719C29719TCT11B.1.3990.001934
noncoding29719C29719ACA11B.1.4010.008197
noncoding29719C29719TCT11B.1.4160.001269
noncoding29719C29719ACA11B.1.4270.00005
noncoding29719C29719TCT11B.1.428.10.034483
noncoding29719C29719TCT11B.1.4310.04
noncoding29719C29719-C-11B.1.438.10.000107
noncoding29719C29719TCT11B.1.438.10.000107
noncoding29719C29719-C-11B.1.4430.004673
noncoding29719C29719TCT11B.1.4650.003802
noncoding29719C29719-C-11B.1.466.20.000391
noncoding29719C29719TCT11B.1.4700.001404
noncoding29719C29719TCT11B.1.5110.034483
noncoding29719C29719-C-11B.1.5170.000427
noncoding29719C29719-C-11B.1.5250.000113
noncoding29719C29719TCT11B.1.5270.003704
noncoding29719C29719TCT11B.1.5370.02
noncoding29719C29719TCT11B.1.5670.003333
noncoding29719C29719TCT11B.1.5740.002151
noncoding29719C29719TCT11B.1.5820.000491
noncoding29719C29719-C-11B.1.5820.000491
noncoding29719C29719-C-11B.1.5970.00463
noncoding29719C29719-C-11B.1.617.30.002985
noncoding29719C29719TCT11B.1.6280.000352
noncoding29719C29719-C-11B.1.6370.000073
noncoding29719C29719ACA11B.1.9.50.005682
noncoding29719C29719TCT11B.4.10.018868
noncoding29719C29719TCT11B.60.00091
noncoding29719C29719-C-11B.60.00091
noncoding29719C29719TCT11B.6.60.000889
noncoding29719C29719TCT11C.36.30.000567
noncoding29719C29719TCT11C.370.000116
noncoding29719C29719ACA11D.20.000075
noncoding29719C29719GCG11P.10.000016
noncoding29719C29719TCT11P.1.130.000898
noncoding29719C29719-C-11P.1.140.000048
noncoding29719C29719-C-11P.1.170.000162
noncoding29719C29719TCT11P.1.170.000162
noncoding29719C29719TCT11P.1.40.000977
noncoding29719C29719-C-11P.1.70.000319
noncoding29719C29719TCT11P.1.70.000319
noncoding29719C29719-C-11P.20.000187
noncoding29719C29719TCT11P.70.004367
noncoding29719C29719TCT11Q.20.000613
noncoding29719C29719TCT11Q.30.000145
noncoding29719C29719TCT11Q.80.000165
noncoding29719C29719TCT11R.10.00009