CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = noncoding : CodonNum = 29717

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
noncoding29717G29717AnoncodingGA29742974129717-29717
noncoding29717G29717-noncodingG-11851185129717-29717
noncoding29717G29717TnoncodingGT641641129717-29717
noncoding29717G29717CnoncodingGC2525129717-29717

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
noncoding29717G29717AGA29742974All0.000569
noncoding29717G29717-G-11851185All0.000227
noncoding29717G29717-G-817817AY.380.407888
noncoding29717G29717AGA731731AY.800.825056
noncoding29717G29717AGA647647B.1.1.70.000579
noncoding29717G29717TGT641641All0.000123
noncoding29717G29717AGA302302B.1.1.1980.443465
noncoding29717G29717AGA206206AY.40.000321
noncoding29717G29717TGT148148B.1.1.70.000132
noncoding29717G29717AGA8989B.1.617.20.000335
noncoding29717G29717TGT6969AY.430.000306
noncoding29717G29717AGA6161AY.1190.002154
noncoding29717G29717TGT5555AY.40.000086
noncoding29717G29717AGA5353AY.250.000319
noncoding29717G29717TGT5151AY.440.00031
noncoding29717G29717AGA4444AY.1030.000273
noncoding29717G29717AGA4343AY.260.001217
noncoding29717G29717AGA4343AY.440.000262
noncoding29717G29717AGA4343B.1.4270.002171
noncoding29717G29717AGA4242AY.290.000662
noncoding29717G29717AGA4242B.10.000385
noncoding29717G29717TGT4040B.1.617.20.000151
noncoding29717G29717AGA3939B.1.1770.000514
noncoding29717G29717AGA3636B.1.10.000653
noncoding29717G29717-G-3535B.1.1.70.000031
noncoding29717G29717AGA3131B.1.1.2220.006324
noncoding29717G29717AGA2828AY.9.10.002344
noncoding29717G29717CGC2525All0.000005
noncoding29717G29717AGA2525AY.4.20.000542
noncoding29717G29717AGA2323B.1.20.000203
noncoding29717G29717-G-2222B.1.617.20.000083
noncoding29717G29717AGA2121AY.420.000845
noncoding29717G29717TGT2121B.1.3980.0625
noncoding29717G29717TGT1919AY.290.0003
noncoding29717G29717AGA1919AY.430.000084
noncoding29717G29717AGA1919AY.50.000392
noncoding29717G29717-G-1919AY.920.005458
noncoding29717G29717AGA1919B.1.2430.001322
noncoding29717G29717-G-1717AY.40.000026
noncoding29717G29717AGA1717AY.9.20.000624
noncoding29717G29717-G-1616AY.290.000252
noncoding29717G29717TGT1616P.10.000252
noncoding29717G29717AGA1515AY.360.002223
noncoding29717G29717AGA1515AY.4.40.006137
noncoding29717G29717TGT1515B.1.1.5190.000596
noncoding29717G29717AGA1414AY.1020.000371
noncoding29717G29717TGT1313AY.30.000129
noncoding29717G29717-G-1111AY.250.000066
noncoding29717G29717-G-1111AY.30.000109
noncoding29717G29717AGA1111B.1.3510.000327
noncoding29717G29717-G-1010AY.440.000061
noncoding29717G29717TGT1010B.1.5260.000235
noncoding29717G29717TGT99AY.1030.000056
noncoding29717G29717AGA99AY.390.000222
noncoding29717G29717-G-99AY.390.000222
noncoding29717G29717AGA99B.1.1.390.004587
noncoding29717G29717AGA99B.1.2580.000599
noncoding29717G29717AGA99B.1.5260.000212
noncoding29717G29717TGT88A.2.5.20.012579
noncoding29717G29717AGA88AY.30.00008
noncoding29717G29717AGA88AY.330.000534
noncoding29717G29717-G-88B.10.000073
noncoding29717G29717TGT88B.1.2210.000568
noncoding29717G29717-G-88B.1.4290.000188
noncoding29717G29717AGA88B.1.617.10.001032
noncoding29717G29717AGA77AY.200.000272
noncoding29717G29717TGT77AY.350.001631
noncoding29717G29717TGT77AY.470.000218
noncoding29717G29717AGA77B.1.1.280.002179
noncoding29717G29717-G-77B.1.1.460.030568
noncoding29717G29717-G-77B.1.160.330.030973
noncoding29717G29717-G-77B.1.2100.014925
noncoding29717G29717AGA66AY.1000.000276
noncoding29717G29717TGT66AY.1020.000159
noncoding29717G29717-G-66AY.1030.000037
noncoding29717G29717AGA66AY.1180.000376
noncoding29717G29717TGT66AY.250.000036
noncoding29717G29717TGT66AY.330.000401
noncoding29717G29717TGT66AY.420.000241
noncoding29717G29717-G-66AY.430.000027
noncoding29717G29717AGA66AY.60.000247
noncoding29717G29717TGT66B.10.000055
noncoding29717G29717-G-66B.1.20.000053
noncoding29717G29717AGA66B.1.6230.003219
noncoding29717G29717-G-55AY.450.000608
noncoding29717G29717-G-55AY.470.000156
noncoding29717G29717-G-55AY.750.00028
noncoding29717G29717TGT55B.1.10.000091
noncoding29717G29717TGT55B.1.20.000044
noncoding29717G29717-G-55B.1.4080.01845
noncoding29717G29717-G-55B.1.4270.000252
noncoding29717G29717TGT55D.20.000375
noncoding29717G29717AGA55P.10.000079
noncoding29717G29717AGA44AY.1170.000338
noncoding29717G29717TGT44AY.1200.000149
noncoding29717G29717AGA44AY.1210.000541
noncoding29717G29717TGT44AY.260.000113
noncoding29717G29717AGA44AY.370.001264
noncoding29717G29717-G-44AY.50.000083
noncoding29717G29717AGA44AY.540.000381
noncoding29717G29717AGA44AY.90.00027
noncoding29717G29717AGA44AY.980.000316
noncoding29717G29717AGA44AY.99.20.000369
noncoding29717G29717-G-44B.1.10.000073
noncoding29717G29717AGA44B.1.1.5190.000159
noncoding29717G29717AGA44B.1.1600.000125
noncoding29717G29717-G-44B.1.1770.000053
noncoding29717G29717TGT44B.1.258.170.000416
noncoding29717G29717AGA44B.1.4200.041667
noncoding29717G29717AGA44B.1.5960.000349
noncoding29717G29717-G-33AY.1090.002219
noncoding29717G29717-G-33AY.1190.000106
noncoding29717G29717AGA33AY.1200.000112
noncoding29717G29717AGA33AY.23.10.001252
noncoding29717G29717TGT33AY.390.000074
noncoding29717G29717TGT33AY.4.20.000065
noncoding29717G29717AGA33AY.450.000365
noncoding29717G29717-G-33AY.540.000286
noncoding29717G29717-G-33AY.610.000314
noncoding29717G29717-G-33AY.650.001599
noncoding29717G29717AGA33AY.690.00056
noncoding29717G29717AGA33AY.830.005172
noncoding29717G29717AGA33AY.900.002053
noncoding29717G29717-G-33B0.000383
noncoding29717G29717AGA33B.1.1.2690.00406
noncoding29717G29717-G-33B.1.1.3060.001315
noncoding29717G29717AGA33B.1.1.3060.001315
noncoding29717G29717AGA33B.1.1.4860.004732
noncoding29717G29717CGC33B.1.1.70.000003
noncoding29717G29717TGT33B.1.1.700.001023
noncoding29717G29717-G-33B.1.1600.000094
noncoding29717G29717TGT33B.1.1770.00004
noncoding29717G29717-G-33B.1.2210.000213
noncoding29717G29717TGT33B.1.3510.000089
noncoding29717G29717TGT33B.1.351.20.000908
noncoding29717G29717AGA33B.1.360.000438
noncoding29717G29717TGT33B.1.3690.000856
noncoding29717G29717AGA33B.1.4290.000071
noncoding29717G29717TGT33B.1.4290.000071
noncoding29717G29717-G-33B.1.440.025
noncoding29717G29717-G-33B.1.5950.000783
noncoding29717G29717AGA33B.1.6210.000266
noncoding29717G29717-G-33P.10.000047
noncoding29717G29717AGA33P.1.170.000485
noncoding29717G29717-G-22A0.000774
noncoding29717G29717AGA22A.2.50.000998
noncoding29717G29717CGC22AY.1000.000092
noncoding29717G29717-G-22AY.1020.000053
noncoding29717G29717-G-22AY.1140.000462
noncoding29717G29717AGA22AY.1160.000574
noncoding29717G29717TGT22AY.1190.000071
noncoding29717G29717-G-22AY.200.000078
noncoding29717G29717-G-22AY.230.000139
noncoding29717G29717AGA22AY.230.000139
noncoding29717G29717AGA22AY.29.10.000441
noncoding29717G29717AGA22AY.3.10.000171
noncoding29717G29717AGA22AY.300.000791
noncoding29717G29717CGC22AY.39.10.000079
noncoding29717G29717AGA22AY.39.10.000079
noncoding29717G29717AGA22AY.4.50.000215
noncoding29717G29717TGT22AY.460.000208
noncoding29717G29717AGA22AY.470.000062
noncoding29717G29717-G-22AY.5.30.000675
noncoding29717G29717AGA22AY.590.001059
noncoding29717G29717AGA22AY.640.00119
noncoding29717G29717-G-22AY.70.000392
noncoding29717G29717AGA22AY.7.10.000225
noncoding29717G29717-G-22AY.740.000231
noncoding29717G29717-G-22AY.75.10.000361
noncoding29717G29717-G-22AY.840.000875
noncoding29717G29717-G-22AY.9.20.000073
noncoding29717G29717AGA22AY.98.10.000097
noncoding29717G29717TGT22AY.99.20.000184
noncoding29717G29717TGT22B0.000256
noncoding29717G29717-G-22B.1.1.1940.009901
noncoding29717G29717AGA22B.1.1.2140.000111
noncoding29717G29717AGA22B.1.1.3170.000823
noncoding29717G29717AGA22B.1.1.330.000842
noncoding29717G29717AGA22B.1.1.700.000682
noncoding29717G29717AGA22B.1.2210.000142
noncoding29717G29717-G-22B.1.2400.000431
noncoding29717G29717TGT22B.1.2580.000133
noncoding29717G29717AGA22B.1.36.80.002
noncoding29717G29717-G-22B.1.36.80.002
noncoding29717G29717TGT22B.1.5250.000226
noncoding29717G29717CGC22B.1.5960.000174
noncoding29717G29717AGA22B.1.6370.000146
noncoding29717G29717-G-22B.390.004662
noncoding29717G29717TGT22B.4.70.020202
noncoding29717G29717TGT22B.400.000729
noncoding29717G29717TGT22B.6.60.001778
noncoding29717G29717-G-22C.370.000232
noncoding29717G29717AGA22C.370.000232
noncoding29717G29717CGC22P.10.000032
noncoding29717G29717AGA22P.1.140.000096
noncoding29717G29717-G-22P.1.150.000465
noncoding29717G29717AGA22Q.80.00033
noncoding29717G29717TGT11A0.000387
noncoding29717G29717AGA11A.250.018182
noncoding29717G29717-G-11AD.20.000219
noncoding29717G29717TGT11AE.80.000489
noncoding29717G29717AGA11AT.10.005128
noncoding29717G29717AGA11AY.10.000396
noncoding29717G29717-G-11AY.100.00053
noncoding29717G29717AGA11AY.1060.000335
noncoding29717G29717AGA11AY.1090.00074
noncoding29717G29717AGA11AY.1110.000183
noncoding29717G29717-G-11AY.1110.000183
noncoding29717G29717CGC11AY.1150.005208
noncoding29717G29717-G-11AY.1170.000085
noncoding29717G29717TGT11AY.1180.000063
noncoding29717G29717-G-11AY.1200.000037
noncoding29717G29717AGA11AY.120.2.10.000498
noncoding29717G29717-G-11AY.120.2.10.000498
noncoding29717G29717TGT11AY.1210.000135
noncoding29717G29717AGA11AY.130.000161
noncoding29717G29717-G-11AY.140.000088
noncoding29717G29717AGA11AY.150.002222
noncoding29717G29717TGT11AY.160.00038
noncoding29717G29717AGA11AY.16.10.00047
noncoding29717G29717TGT11AY.190.00114
noncoding29717G29717TGT11AY.200.000039
noncoding29717G29717CGC11AY.230.00007
noncoding29717G29717TGT11AY.240.000431
noncoding29717G29717-G-11AY.260.000028
noncoding29717G29717AGA11AY.270.000065
noncoding29717G29717CGC11AY.29.10.000221
noncoding29717G29717-G-11AY.3.10.000085
noncoding29717G29717AGA11AY.320.000532
noncoding29717G29717AGA11AY.340.000097
noncoding29717G29717-G-11AY.340.000097
noncoding29717G29717TGT11AY.340.000097
noncoding29717G29717TGT11AY.39.10.00004
noncoding29717G29717CGC11AY.40.000002
noncoding29717G29717CGC11AY.4.20.000022
noncoding29717G29717AGA11AY.4.2.10.000149
noncoding29717G29717-G-11AY.400.000964
noncoding29717G29717-G-11AY.420.00004
noncoding29717G29717CGC11AY.430.000004
noncoding29717G29717CGC11AY.440.000006
noncoding29717G29717TGT11AY.450.000122
noncoding29717G29717CGC11AY.460.000104
noncoding29717G29717-G-11AY.460.000104
noncoding29717G29717-G-11AY.46.20.000635
noncoding29717G29717-G-11AY.46.30.000934
noncoding29717G29717TGT11AY.46.40.000165
noncoding29717G29717-G-11AY.46.60.000072
noncoding29717G29717AGA11AY.46.60.000072
noncoding29717G29717-G-11AY.5.40.000277
noncoding29717G29717AGA11AY.5.40.000277
noncoding29717G29717-G-11AY.520.000814
noncoding29717G29717TGT11AY.540.000095
noncoding29717G29717-G-11AY.560.001605
noncoding29717G29717AGA11AY.600.000938
noncoding29717G29717TGT11AY.610.000105
noncoding29717G29717AGA11AY.610.000105
noncoding29717G29717-G-11AY.620.000436
noncoding29717G29717AGA11AY.650.000533
noncoding29717G29717TGT11AY.7.10.000113
noncoding29717G29717AGA11AY.730.000665
noncoding29717G29717TGT11AY.730.000665
noncoding29717G29717TGT11AY.740.000116
noncoding29717G29717AGA11AY.750.000056
noncoding29717G29717AGA11AY.75.10.00018
noncoding29717G29717-G-11AY.810.001992
noncoding29717G29717TGT11AY.840.000437
noncoding29717G29717-G-11AY.870.000833
noncoding29717G29717TGT11AY.880.000884
noncoding29717G29717TGT11AY.9.10.000084
noncoding29717G29717-G-11AY.9.10.000084
noncoding29717G29717TGT11AY.9.20.000037
noncoding29717G29717-G-11AY.910.00073
noncoding29717G29717AGA11AY.920.000287
noncoding29717G29717-G-11AY.940.000443
noncoding29717G29717CGC11AY.960.002075
noncoding29717G29717TGT11AY.98.10.000048
noncoding29717G29717-G-11AY.99.20.000092
noncoding29717G29717-G-11AZ.20.000821
noncoding29717G29717CGC11B.10.000009
noncoding29717G29717AGA11B.1.1.10.000327
noncoding29717G29717AGA11B.1.1.1610.003534
noncoding29717G29717TGT11B.1.1.1740.003378
noncoding29717G29717-G-11B.1.1.1970.037037
noncoding29717G29717-G-11B.1.1.2140.000055
noncoding29717G29717-G-11B.1.1.2180.007692
noncoding29717G29717-G-11B.1.1.2220.000204
noncoding29717G29717TGT11B.1.1.2220.000204
noncoding29717G29717AGA11B.1.1.250.000569
noncoding29717G29717-G-11B.1.1.2770.000759
noncoding29717G29717TGT11B.1.1.280.000311
noncoding29717G29717-G-11B.1.1.3050.003861
noncoding29717G29717AGA11B.1.1.3180.000302
noncoding29717G29717AGA11B.1.1.3220.008772
noncoding29717G29717-G-11B.1.1.330.000421
noncoding29717G29717-G-11B.1.1.3480.000796
noncoding29717G29717TGT11B.1.1.3540.004386
noncoding29717G29717TGT11B.1.1.3720.000689
noncoding29717G29717TGT11B.1.1.3740.002375
noncoding29717G29717AGA11B.1.1.3800.009804
noncoding29717G29717-G-11B.1.1.390.00051
noncoding29717G29717-G-11B.1.1.4090.002833
noncoding29717G29717TGT11B.1.1.4340.000349
noncoding29717G29717TGT11B.1.1.4620.008621
noncoding29717G29717AGA11B.1.1.4660.008696
noncoding29717G29717TGT11B.1.1.890.006061
noncoding29717G29717AGA11B.1.1180.006711
noncoding29717G29717AGA11B.1.160.70.002079
noncoding29717G29717TGT11B.1.177.210.000076
noncoding29717G29717AGA11B.1.177.320.00135
noncoding29717G29717AGA11B.1.177.40.000211
noncoding29717G29717AGA11B.1.177.400.005155
noncoding29717G29717AGA11B.1.177.440.000519
noncoding29717G29717AGA11B.1.177.560.000668
noncoding29717G29717TGT11B.1.177.560.000668
noncoding29717G29717AGA11B.1.177.60.000977
noncoding29717G29717-G-11B.1.177.630.002703
noncoding29717G29717AGA11B.1.177.70.000165
noncoding29717G29717AGA11B.1.177.80.000752
noncoding29717G29717AGA11B.1.177.870.000728
noncoding29717G29717CGC11B.1.177.90.001332
noncoding29717G29717CGC11B.1.20.000009
noncoding29717G29717-G-11B.1.2060.000816
noncoding29717G29717TGT11B.1.2060.000816
noncoding29717G29717AGA11B.1.221.30.000833
noncoding29717G29717-G-11B.1.2220.001692
noncoding29717G29717AGA11B.1.2340.000132
noncoding29717G29717AGA11B.1.2390.001221
noncoding29717G29717AGA11B.1.2400.000216
noncoding29717G29717CGC11B.1.2430.00007
noncoding29717G29717-G-11B.1.2580.000067
noncoding29717G29717AGA11B.1.258.110.000396
noncoding29717G29717-G-11B.1.258.160.001637
noncoding29717G29717AGA11B.1.258.170.000104
noncoding29717G29717TGT11B.1.2600.003344
noncoding29717G29717-G-11B.1.2980.002114
noncoding29717G29717TGT11B.1.351.30.000876
noncoding29717G29717TGT11B.1.36.170.000494
noncoding29717G29717AGA11B.1.36.290.000517
noncoding29717G29717-G-11B.1.36.310.001751
noncoding29717G29717AGA11B.1.4160.001269
noncoding29717G29717TGT11B.1.4160.001269
noncoding29717G29717TGT11B.1.4270.00005
noncoding29717G29717-G-11B.1.438.10.000107
noncoding29717G29717AGA11B.1.438.10.000107
noncoding29717G29717TGT11B.1.438.10.000107
noncoding29717G29717-G-11B.1.4430.004673
noncoding29717G29717AGA11B.1.4530.003236
noncoding29717G29717AGA11B.1.4700.001404
noncoding29717G29717AGA11B.1.5170.000427
noncoding29717G29717-G-11B.1.5170.000427
noncoding29717G29717-G-11B.1.5250.000113
noncoding29717G29717AGA11B.1.5400.009709
noncoding29717G29717TGT11B.1.5610.000397
noncoding29717G29717TGT11B.1.5650.00081
noncoding29717G29717AGA11B.1.5660.019231
noncoding29717G29717AGA11B.1.5760.000907
noncoding29717G29717-G-11B.1.5820.000491
noncoding29717G29717TGT11B.1.5960.000087
noncoding29717G29717AGA11B.1.6160.02439
noncoding29717G29717-G-11B.1.617.30.002985
noncoding29717G29717-G-11B.1.6210.000089
noncoding29717G29717AGA11B.1.6280.000352
noncoding29717G29717-G-11B.1.6370.000073
noncoding29717G29717AGA11B.410.008
noncoding29717G29717-G-11B.60.00091
noncoding29717G29717AGA11B.6.60.000889
noncoding29717G29717AGA11C.36.30.000567
noncoding29717G29717CGC11K.30.006173
noncoding29717G29717TGT11P.1.140.000048
noncoding29717G29717-G-11P.1.140.000048
noncoding29717G29717AGA11P.1.150.000232
noncoding29717G29717-G-11P.1.170.000162
noncoding29717G29717TGT11P.1.70.000319
noncoding29717G29717AGA11P.20.000187
noncoding29717G29717-G-11P.20.000187
noncoding29717G29717AGA11Q.10.000126
noncoding29717G29717TGT11Q.80.000165