CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = noncoding : CodonNum = 29710

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
noncoding29710T29710CnoncodingTC80438043129710-29710
noncoding29710T29710AnoncodingTA13161316129710-29710
noncoding29710T29710-noncodingT-249249129710-29710
noncoding29710T29710GnoncodingTG9393129710-29710
noncoding29710T29710MnoncodingTM11129710-29710
noncoding29710T29710RnoncodingTR11129710-29710

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
noncoding29710T29710CTC80438043All0.001538
noncoding29710T29710CTC73437343B.1.2430.51096
noncoding29710T29710ATA13161316All0.000252
noncoding29710T29710ATA891891B.1.4360.916667
noncoding29710T29710CTC338338B.10.003096
noncoding29710T29710-T-249249All0.000048
noncoding29710T29710GTG9393All0.000018
noncoding29710T29710GTG8080AY.1190.002825
noncoding29710T29710CTC4646B.1.1.4660.4
noncoding29710T29710ATA3838B.1.1.70.000034
noncoding29710T29710ATA3636AY.40.000056
noncoding29710T29710ATA3535B.10.000321
noncoding29710T29710ATA3535B.1.617.20.000132
noncoding29710T29710CTC3333B.1.20.000291
noncoding29710T29710CTC3232B.1.3990.061896
noncoding29710T29710CTC3030B.1.1.70.000027
noncoding29710T29710ATA3030B.1.4220.02437
noncoding29710T29710ATA2626AY.360.003854
noncoding29710T29710ATA2222B.1.3510.000654
noncoding29710T29710ATA2121AY.470.000653
noncoding29710T29710-T-1919AY.920.005458
noncoding29710T29710CTC1717B.1.10.000308
noncoding29710T29710-T-1717B.1.1.70.000015
noncoding29710T29710CTC1616B.1.617.20.00006
noncoding29710T29710-T-1515AY.40.000023
noncoding29710T29710ATA1515B.1.20.000132
noncoding29710T29710ATA1313AY.1030.000081
noncoding29710T29710CTC1313AY.40.00002
noncoding29710T29710ATA1212AY.1000.000552
noncoding29710T29710ATA1212B.1.5960.001046
noncoding29710T29710CTC1111AY.1000.000506
noncoding29710T29710ATA1111AY.200.000428
noncoding29710T29710-T-1111AY.250.000066
noncoding29710T29710CTC1111AY.440.000067
noncoding29710T29710-T-1010AY.290.000158
noncoding29710T29710ATA1010AY.430.000044
noncoding29710T29710-T-1010AY.440.000061
noncoding29710T29710CTC99B.1.5960.000784
noncoding29710T29710-T-99B.1.617.20.000034
noncoding29710T29710ATA88AY.440.000049
noncoding29710T29710-T-88B.10.000073
noncoding29710T29710CTC77AY.250.000042
noncoding29710T29710-T-77AY.30.00007
noncoding29710T29710-T-77B.1.1.460.030568
noncoding29710T29710-T-77B.1.20.000062
noncoding29710T29710-T-77B.1.2100.014925
noncoding29710T29710CTC77B.1.2340.000924
noncoding29710T29710ATA77C.360.006375
noncoding29710T29710CTC66AY.1210.000812
noncoding29710T29710-T-66AY.430.000027
noncoding29710T29710ATA66AY.640.003571
noncoding29710T29710-T-66B.1.160.330.026549
noncoding29710T29710CTC66B.1.2410.00487
noncoding29710T29710ATA66B.1.4290.000141
noncoding29710T29710CTC66B.1.6020.039216
noncoding29710T29710ATA66P.10.000095
noncoding29710T29710ATA55AY.1170.000423
noncoding29710T29710-T-55AY.390.000124
noncoding29710T29710ATA55AY.98.10.000242
noncoding29710T29710-T-55B.1.10.000091
noncoding29710T29710ATA55B.1.1110.005875
noncoding29710T29710-T-55B.1.1770.000066
noncoding29710T29710CTC55B.1.3510.000149
noncoding29710T29710CTC55B.1.3960.003529
noncoding29710T29710CTC55B.1.4290.000118
noncoding29710T29710CTC55B.1.5260.000118
noncoding29710T29710-T-44AY.1030.000025
noncoding29710T29710GTG44AY.46.60.000289
noncoding29710T29710CTC44AZ.20.003284
noncoding29710T29710CTC33AY.1030.000019
noncoding29710T29710-T-33AY.1090.002219
noncoding29710T29710ATA33AY.1130.000427
noncoding29710T29710CTC33AY.230.000209
noncoding29710T29710ATA33AY.250.000018
noncoding29710T29710ATA33AY.350.000699
noncoding29710T29710ATA33AY.390.000074
noncoding29710T29710-T-33AY.470.000093
noncoding29710T29710CTC33B0.000383
noncoding29710T29710CTC33B.1.1.1920.006928
noncoding29710T29710-T-33B.1.1.1940.014851
noncoding29710T29710-T-33B.1.1.3060.001315
noncoding29710T29710CTC33B.1.1600.000094
noncoding29710T29710CTC33B.1.5670.01
noncoding29710T29710-T-33C.370.000348
noncoding29710T29710-T-33P.10.000047
noncoding29710T29710-T-22A0.000774
noncoding29710T29710ATA22AY.1020.000053
noncoding29710T29710-T-22AY.1020.000053
noncoding29710T29710ATA22AY.120.10.000642
noncoding29710T29710ATA22AY.30.00002
noncoding29710T29710-T-22AY.3.10.000171
noncoding29710T29710CTC22AY.330.000134
noncoding29710T29710-T-22AY.340.000194
noncoding29710T29710CTC22AY.410.000588
noncoding29710T29710-T-22AY.450.000243
noncoding29710T29710-T-22AY.5.30.000675
noncoding29710T29710-T-22AY.610.00021
noncoding29710T29710CTC22AZ.30.00304
noncoding29710T29710-T-22B0.000256
noncoding29710T29710-T-22B.1.1.330.000842
noncoding29710T29710CTC22B.1.1390.001466
noncoding29710T29710ATA22B.1.1600.000062
noncoding29710T29710CTC22B.1.177.730.001133
noncoding29710T29710CTC22B.1.1990.008264
noncoding29710T29710GTG22B.1.20.000018
noncoding29710T29710-T-22B.1.2210.000142
noncoding29710T29710CTC22B.1.3110.000549
noncoding29710T29710GTG22B.1.3510.000059
noncoding29710T29710-T-22B.1.36.80.002
noncoding29710T29710CTC22B.1.3690.00057
noncoding29710T29710ATA22B.1.4270.000101
noncoding29710T29710-T-22B.1.4290.000047
noncoding29710T29710ATA22B.1.5260.000047
noncoding29710T29710CTC22B.1.5640.000852
noncoding29710T29710ATA22B.1.5800.00813
noncoding29710T29710CTC22B.1.780.017094
noncoding29710T29710CTC22P.20.000373
noncoding29710T29710CTC22R.10.00018
noncoding29710T29710ATA11A0.000387
noncoding29710T29710-T-11A.10.000282
noncoding29710T29710-T-11AD.20.000219
noncoding29710T29710MTM11All0
noncoding29710T29710RTR11All0
noncoding29710T29710GTG11AY.1020.000027
noncoding29710T29710ATA11AY.1090.00074
noncoding29710T29710-T-11AY.1110.000183
noncoding29710T29710ATA11AY.116.10.000311
noncoding29710T29710-T-11AY.1170.000085
noncoding29710T29710ATA11AY.1190.000035
noncoding29710T29710-T-11AY.1190.000035
noncoding29710T29710-T-11AY.120.2.10.000498
noncoding29710T29710ATA11AY.130.000161
noncoding29710T29710-T-11AY.140.000088
noncoding29710T29710-T-11AY.200.000039
noncoding29710T29710CTC11AY.200.000039
noncoding29710T29710-T-11AY.230.00007
noncoding29710T29710ATA11AY.230.00007
noncoding29710T29710CTC11AY.23.10.000417
noncoding29710T29710-T-11AY.260.000028
noncoding29710T29710ATA11AY.260.000028
noncoding29710T29710ATA11AY.290.000016
noncoding29710T29710ATA11AY.3.10.000085
noncoding29710T29710GTG11AY.390.000025
noncoding29710T29710CTC11AY.390.000025
noncoding29710T29710ATA11AY.39.10.00004
noncoding29710T29710GTG11AY.40.000002
noncoding29710T29710-T-11AY.400.000964
noncoding29710T29710CTC11AY.420.00004
noncoding29710T29710ATA11AY.420.00004
noncoding29710T29710CTC11AY.430.000004
noncoding29710T29710GTG11AY.440.000006
noncoding29710T29710CTC11AY.460.000104
noncoding29710T29710-T-11AY.46.20.000635
noncoding29710T29710-T-11AY.46.30.000934
noncoding29710T29710-T-11AY.46.40.000165
noncoding29710T29710CTC11AY.46.60.000072
noncoding29710T29710-T-11AY.46.60.000072
noncoding29710T29710-T-11AY.50.000021
noncoding29710T29710CTC11AY.530.000288
noncoding29710T29710ATA11AY.610.000105
noncoding29710T29710-T-11AY.620.000436
noncoding29710T29710-T-11AY.70.000196
noncoding29710T29710-T-11AY.750.000056
noncoding29710T29710CTC11AY.770.001127
noncoding29710T29710ATA11AY.80.000606
noncoding29710T29710-T-11AY.840.000437
noncoding29710T29710ATA11AY.870.000833
noncoding29710T29710-T-11AY.9.10.000084
noncoding29710T29710ATA11AY.9.20.000037
noncoding29710T29710-T-11AY.910.00073
noncoding29710T29710-T-11AY.940.000443
noncoding29710T29710CTC11AY.980.000079
noncoding29710T29710RTR11AY.990.001049
noncoding29710T29710CTC11AY.99.20.000092
noncoding29710T29710-T-11AZ.20.000821
noncoding29710T29710ATA11B0.000128
noncoding29710T29710MTM11B.10.000009
noncoding29710T29710ATA11B.1.10.000018
noncoding29710T29710ATA11B.1.1.1570.000913
noncoding29710T29710-T-11B.1.1.1970.037037
noncoding29710T29710-T-11B.1.1.2140.000055
noncoding29710T29710-T-11B.1.1.2180.007692
noncoding29710T29710-T-11B.1.1.2220.000204
noncoding29710T29710CTC11B.1.1.2220.000204
noncoding29710T29710-T-11B.1.1.2770.000759
noncoding29710T29710CTC11B.1.1.280.000311
noncoding29710T29710-T-11B.1.1.3050.003861
noncoding29710T29710ATA11B.1.1.3260.001761
noncoding29710T29710-T-11B.1.1.3480.000796
noncoding29710T29710CTC11B.1.1.3770.001381
noncoding29710T29710-T-11B.1.1.4090.002833
noncoding29710T29710CTC11B.1.1.4320.001266
noncoding29710T29710ATA11B.1.1.4640.001473
noncoding29710T29710ATA11B.1.1.5070.008696
noncoding29710T29710CTC11B.1.1.5170.006803
noncoding29710T29710CTC11B.1.1.5190.00004
noncoding29710T29710CTC11B.1.1.5260.003546
noncoding29710T29710ATA11B.1.1060.03125
noncoding29710T29710CTC11B.1.1110.001175
noncoding29710T29710ATA11B.1.130.002375
noncoding29710T29710ATA11B.1.160.80.001289
noncoding29710T29710CTC11B.1.1670.007812
noncoding29710T29710CTC11B.1.1690.014925
noncoding29710T29710-T-11B.1.177.630.002703
noncoding29710T29710CTC11B.1.1920.009259
noncoding29710T29710CTC11B.1.2060.000816
noncoding29710T29710-T-11B.1.2220.001692
noncoding29710T29710CTC11B.1.2290.009709
noncoding29710T29710ATA11B.1.2390.001221
noncoding29710T29710CTC11B.1.2470.014925
noncoding29710T29710ATA11B.1.2580.000067
noncoding29710T29710-T-11B.1.2580.000067
noncoding29710T29710CTC11B.1.2580.000067
noncoding29710T29710-T-11B.1.258.160.001637
noncoding29710T29710-T-11B.1.2980.002114
noncoding29710T29710CTC11B.1.3060.005714
noncoding29710T29710ATA11B.1.3110.000275
noncoding29710T29710CTC11B.1.3490.000715
noncoding29710T29710ATA11B.1.36.180.00042
noncoding29710T29710ATA11B.1.36.290.000517
noncoding29710T29710-T-11B.1.36.310.001751
noncoding29710T29710CTC11B.1.36.340.021277
noncoding29710T29710CTC11B.1.3950.007042
noncoding29710T29710CTC11B.1.4270.00005
noncoding29710T29710-T-11B.1.438.10.000107
noncoding29710T29710-T-11B.1.4430.004673
noncoding29710T29710CTC11B.1.4620.007246
noncoding29710T29710ATA11B.1.4650.003802
noncoding29710T29710CTC11B.1.466.20.000391
noncoding29710T29710CTC11B.1.5170.000427
noncoding29710T29710-T-11B.1.5170.000427
noncoding29710T29710ATA11B.1.5330.009615
noncoding29710T29710CTC11B.1.5450.014493
noncoding29710T29710CTC11B.1.5600.00463
noncoding29710T29710CTC11B.1.5610.000397
noncoding29710T29710CTC11B.1.5770.000687
noncoding29710T29710CTC11B.1.5820.000491
noncoding29710T29710-T-11B.1.5820.000491
noncoding29710T29710CTC11B.1.5950.000261
noncoding29710T29710CTC11B.1.6120.002653
noncoding29710T29710CTC11B.1.617.10.000129
noncoding29710T29710GTG11B.1.617.20.000004
noncoding29710T29710-T-11B.1.617.30.002985
noncoding29710T29710-T-11B.1.6210.000089
noncoding29710T29710CTC11B.1.6310.003367
noncoding29710T29710CTC11B.1.6370.000073
noncoding29710T29710-T-11B.1.6370.000073
noncoding29710T29710ATA11B.4.10.018868
noncoding29710T29710-T-11B.60.00091
noncoding29710T29710ATA11B.6.60.000889
noncoding29710T29710CTC11P.1.100.000269
noncoding29710T29710-T-11P.1.150.000232
noncoding29710T29710-T-11P.1.170.000162
noncoding29710T29710ATA11P.20.000187
noncoding29710T29710-T-11P.20.000187
noncoding29710T29710CTC11Q.10.000126
noncoding29710T29710ATA11Q.40.000455