CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
noncoding | 29705 | G29705T | noncoding | G | T | 6249 | 6249 | 1 | 29705-29705 | |
noncoding | 29705 | G29705- | noncoding | G | - | 203 | 203 | 1 | 29705-29705 | |
noncoding | 29705 | G29705C | noncoding | G | C | 107 | 107 | 1 | 29705-29705 | |
noncoding | 29705 | G29705A | noncoding | G | A | 47 | 47 | 1 | 29705-29705 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
noncoding | 29705 | G29705T | G | T | 6249 | 6249 | All | 0.001195 |
noncoding | 29705 | G29705T | G | T | 2488 | 2488 | AY.70 | 0.518766 |
noncoding | 29705 | G29705T | G | T | 568 | 568 | AY.4 | 0.000884 |
noncoding | 29705 | G29705T | G | T | 498 | 498 | B.1.375 | 0.408197 |
noncoding | 29705 | G29705T | G | T | 411 | 411 | AY.43 | 0.001821 |
noncoding | 29705 | G29705T | G | T | 295 | 295 | AY.9.1 | 0.024699 |
noncoding | 29705 | G29705T | G | T | 250 | 250 | B.1.1.7 | 0.000224 |
noncoding | 29705 | G29705T | G | T | 210 | 210 | B.1.1 | 0.00381 |
noncoding | 29705 | G29705- | G | - | 203 | 203 | All | 0.000039 |
noncoding | 29705 | G29705T | G | T | 178 | 178 | B.1.617.2 | 0.00067 |
noncoding | 29705 | G29705C | G | C | 107 | 107 | All | 0.00002 |
noncoding | 29705 | G29705T | G | T | 96 | 96 | B.1 | 0.000879 |
noncoding | 29705 | G29705T | G | T | 77 | 77 | B.1.117 | 0.9625 |
noncoding | 29705 | G29705T | G | T | 67 | 67 | AY.25 | 0.000403 |
noncoding | 29705 | G29705T | G | T | 65 | 65 | B.1.1.165 | 1 |
noncoding | 29705 | G29705T | G | T | 64 | 64 | AY.44 | 0.00039 |
noncoding | 29705 | G29705T | G | T | 62 | 62 | AY.103 | 0.000385 |
noncoding | 29705 | G29705T | G | T | 57 | 57 | AY.100 | 0.002622 |
noncoding | 29705 | G29705T | G | T | 51 | 51 | AY.20 | 0.001982 |
noncoding | 29705 | G29705A | G | A | 47 | 47 | All | 0.000009 |
noncoding | 29705 | G29705T | G | T | 38 | 38 | B.1.1.519 | 0.001509 |
noncoding | 29705 | G29705T | G | T | 37 | 37 | AY.4.2 | 0.000802 |
noncoding | 29705 | G29705T | G | T | 33 | 33 | AY.102 | 0.000875 |
noncoding | 29705 | G29705T | G | T | 32 | 32 | B.1.422 | 0.025995 |
noncoding | 29705 | G29705T | G | T | 30 | 30 | AY.47 | 0.000933 |
noncoding | 29705 | G29705T | G | T | 30 | 30 | AY.5 | 0.000619 |
noncoding | 29705 | G29705C | G | C | 22 | 22 | AY.103 | 0.000137 |
noncoding | 29705 | G29705T | G | T | 22 | 22 | AY.75 | 0.001232 |
noncoding | 29705 | G29705T | G | T | 22 | 22 | B.1.596 | 0.001917 |
noncoding | 29705 | G29705C | G | C | 21 | 21 | AY.41 | 0.006173 |
noncoding | 29705 | G29705T | G | T | 20 | 20 | AY.3 | 0.000199 |
noncoding | 29705 | G29705T | G | T | 18 | 18 | AY.99 | 0.018888 |
noncoding | 29705 | G29705T | G | T | 18 | 18 | B.1.2 | 0.000158 |
noncoding | 29705 | G29705T | G | T | 16 | 16 | AY.24 | 0.006897 |
noncoding | 29705 | G29705T | G | T | 16 | 16 | AY.6 | 0.000658 |
noncoding | 29705 | G29705T | G | T | 15 | 15 | AY.33 | 0.001002 |
noncoding | 29705 | G29705T | G | T | 15 | 15 | AY.39 | 0.000371 |
noncoding | 29705 | G29705- | G | - | 15 | 15 | B.1.1.7 | 0.000013 |
noncoding | 29705 | G29705C | G | C | 14 | 14 | AY.3 | 0.000139 |
noncoding | 29705 | G29705T | G | T | 13 | 13 | AY.90 | 0.008898 |
noncoding | 29705 | G29705T | G | T | 13 | 13 | B.1.1.216 | 0.011576 |
noncoding | 29705 | G29705- | G | - | 12 | 12 | AY.25 | 0.000072 |
noncoding | 29705 | G29705T | G | T | 12 | 12 | AY.26 | 0.00034 |
noncoding | 29705 | G29705T | G | T | 12 | 12 | AY.42 | 0.000483 |
noncoding | 29705 | G29705C | G | C | 12 | 12 | AY.43 | 0.000053 |
noncoding | 29705 | G29705T | G | T | 11 | 11 | A.2 | 0.00728 |
noncoding | 29705 | G29705- | G | - | 11 | 11 | AY.4 | 0.000017 |
noncoding | 29705 | G29705T | G | T | 10 | 10 | A | 0.00387 |
noncoding | 29705 | G29705T | G | T | 10 | 10 | AY.111 | 0.001832 |
noncoding | 29705 | G29705T | G | T | 10 | 10 | AY.121 | 0.001353 |
noncoding | 29705 | G29705T | G | T | 10 | 10 | AY.27 | 0.000647 |
noncoding | 29705 | G29705T | G | T | 10 | 10 | AY.46 | 0.001041 |
noncoding | 29705 | G29705T | G | T | 10 | 10 | AY.75.1 | 0.001803 |
noncoding | 29705 | G29705T | G | T | 10 | 10 | B.1.351 | 0.000297 |
noncoding | 29705 | G29705C | G | C | 10 | 10 | B.1.617.2 | 0.000038 |
noncoding | 29705 | G29705T | G | T | 10 | 10 | P.1 | 0.000158 |
noncoding | 29705 | G29705T | G | T | 9 | 9 | AY.120 | 0.000335 |
noncoding | 29705 | G29705- | G | - | 9 | 9 | AY.3 | 0.00009 |
noncoding | 29705 | G29705T | G | T | 9 | 9 | B.1.177.21 | 0.000688 |
noncoding | 29705 | G29705T | G | T | 9 | 9 | B.1.469 | 0.032491 |
noncoding | 29705 | G29705- | G | - | 8 | 8 | AY.44 | 0.000049 |
noncoding | 29705 | G29705- | G | - | 8 | 8 | B.1 | 0.000073 |
noncoding | 29705 | G29705T | G | T | 8 | 8 | B.1.243 | 0.000557 |
noncoding | 29705 | G29705- | G | - | 8 | 8 | B.1.617.2 | 0.00003 |
noncoding | 29705 | G29705T | G | T | 8 | 8 | B.1.637 | 0.000585 |
noncoding | 29705 | G29705T | G | T | 7 | 7 | A.21 | 0.019391 |
noncoding | 29705 | G29705T | G | T | 7 | 7 | AY.109 | 0.005178 |
noncoding | 29705 | G29705T | G | T | 7 | 7 | AY.119 | 0.000247 |
noncoding | 29705 | G29705T | G | T | 7 | 7 | AY.9 | 0.000473 |
noncoding | 29705 | G29705T | G | T | 7 | 7 | B.1.1.222 | 0.001428 |
noncoding | 29705 | G29705- | G | - | 7 | 7 | B.1.1.46 | 0.030568 |
noncoding | 29705 | G29705- | G | - | 7 | 7 | B.1.2 | 0.000062 |
noncoding | 29705 | G29705- | G | - | 7 | 7 | B.1.210 | 0.014925 |
noncoding | 29705 | G29705T | G | T | 6 | 6 | AY.116 | 0.001721 |
noncoding | 29705 | G29705T | G | T | 6 | 6 | AY.36 | 0.000889 |
noncoding | 29705 | G29705C | G | C | 6 | 6 | AY.4 | 0.000009 |
noncoding | 29705 | G29705- | G | - | 6 | 6 | AY.43 | 0.000027 |
noncoding | 29705 | G29705T | G | T | 6 | 6 | AY.9.2 | 0.00022 |
noncoding | 29705 | G29705C | G | C | 6 | 6 | B.1.1.7 | 0.000005 |
noncoding | 29705 | G29705- | G | - | 6 | 6 | B.1.160.33 | 0.026549 |
noncoding | 29705 | G29705T | G | T | 6 | 6 | B.1.240 | 0.001293 |
noncoding | 29705 | G29705T | G | T | 6 | 6 | B.1.36 | 0.000875 |
noncoding | 29705 | G29705T | G | T | 6 | 6 | B.1.429 | 0.000141 |
noncoding | 29705 | G29705A | G | A | 5 | 5 | AY.4 | 0.000008 |
noncoding | 29705 | G29705T | G | T | 5 | 5 | AY.98 | 0.000395 |
noncoding | 29705 | G29705T | G | T | 5 | 5 | B.1.160 | 0.000156 |
noncoding | 29705 | G29705- | G | - | 5 | 5 | B.1.177 | 0.000066 |
noncoding | 29705 | G29705A | G | A | 4 | 4 | AY.23.1 | 0.001669 |
noncoding | 29705 | G29705- | G | - | 4 | 4 | AY.39 | 0.000099 |
noncoding | 29705 | G29705T | G | T | 4 | 4 | AY.45 | 0.000487 |
noncoding | 29705 | G29705T | G | T | 4 | 4 | AY.46.4 | 0.000658 |
noncoding | 29705 | G29705T | G | T | 4 | 4 | AY.46.6 | 0.000289 |
noncoding | 29705 | G29705- | G | - | 4 | 4 | B.1.1 | 0.000073 |
noncoding | 29705 | G29705T | G | T | 4 | 4 | B.1.1.214 | 0.000222 |
noncoding | 29705 | G29705T | G | T | 4 | 4 | B.1.36.35 | 0.010417 |
noncoding | 29705 | G29705- | G | - | 4 | 4 | P.1 | 0.000063 |
noncoding | 29705 | G29705T | G | T | 4 | 4 | P.2 | 0.000747 |
noncoding | 29705 | G29705- | G | - | 3 | 3 | AY.103 | 0.000019 |
noncoding | 29705 | G29705- | G | - | 3 | 3 | AY.109 | 0.002219 |
noncoding | 29705 | G29705A | G | A | 3 | 3 | AY.25 | 0.000018 |
noncoding | 29705 | G29705- | G | - | 3 | 3 | AY.29 | 0.000047 |
noncoding | 29705 | G29705T | G | T | 3 | 3 | AY.29 | 0.000047 |
noncoding | 29705 | G29705T | G | T | 3 | 3 | AY.53 | 0.000863 |
noncoding | 29705 | G29705T | G | T | 3 | 3 | AY.61 | 0.000314 |
noncoding | 29705 | G29705T | G | T | 3 | 3 | AY.98.1 | 0.000145 |
noncoding | 29705 | G29705A | G | A | 3 | 3 | B | 0.000383 |
noncoding | 29705 | G29705- | G | - | 3 | 3 | B.1.1.194 | 0.014851 |
noncoding | 29705 | G29705T | G | T | 3 | 3 | B.1.1.25 | 0.001706 |
noncoding | 29705 | G29705- | G | - | 3 | 3 | B.1.1.306 | 0.001315 |
noncoding | 29705 | G29705T | G | T | 3 | 3 | B.1.1.318 | 0.000905 |
noncoding | 29705 | G29705T | G | T | 3 | 3 | B.1.177 | 0.00004 |
noncoding | 29705 | G29705T | G | T | 3 | 3 | B.1.236 | 0.00616 |
noncoding | 29705 | G29705T | G | T | 3 | 3 | B.1.258.17 | 0.000312 |
noncoding | 29705 | G29705T | G | T | 3 | 3 | B.1.36.29 | 0.001552 |
noncoding | 29705 | G29705T | G | T | 3 | 3 | B.1.427 | 0.000151 |
noncoding | 29705 | G29705A | G | A | 3 | 3 | B.55 | 0.00885 |
noncoding | 29705 | G29705- | G | - | 3 | 3 | C.37 | 0.000348 |
noncoding | 29705 | G29705T | G | T | 3 | 3 | C.37 | 0.000348 |
noncoding | 29705 | G29705T | G | T | 3 | 3 | D.2 | 0.000225 |
noncoding | 29705 | G29705A | G | A | 2 | 2 | 0.111111 | |
noncoding | 29705 | G29705A | G | A | 2 | 2 | A | 0.000774 |
noncoding | 29705 | G29705T | G | T | 2 | 2 | A.2.5 | 0.000998 |
noncoding | 29705 | G29705T | G | T | 2 | 2 | AE.3 | 0.064516 |
noncoding | 29705 | G29705A | G | A | 2 | 2 | AY.103 | 0.000012 |
noncoding | 29705 | G29705T | G | T | 2 | 2 | AY.106 | 0.00067 |
noncoding | 29705 | G29705T | G | T | 2 | 2 | AY.118 | 0.000125 |
noncoding | 29705 | G29705T | G | T | 2 | 2 | AY.14 | 0.000176 |
noncoding | 29705 | G29705T | G | T | 2 | 2 | AY.3.1 | 0.000171 |
noncoding | 29705 | G29705- | G | - | 2 | 2 | AY.3.1 | 0.000171 |
noncoding | 29705 | G29705T | G | T | 2 | 2 | AY.35 | 0.000466 |
noncoding | 29705 | G29705A | G | A | 2 | 2 | AY.44 | 0.000012 |
noncoding | 29705 | G29705- | G | - | 2 | 2 | AY.45 | 0.000243 |
noncoding | 29705 | G29705T | G | T | 2 | 2 | AY.46.5 | 0.000397 |
noncoding | 29705 | G29705- | G | - | 2 | 2 | AY.47 | 0.000062 |
noncoding | 29705 | G29705T | G | T | 2 | 2 | AY.5.4 | 0.000553 |
noncoding | 29705 | G29705T | G | T | 2 | 2 | AY.54 | 0.000191 |
noncoding | 29705 | G29705C | G | C | 2 | 2 | AY.59 | 0.001059 |
noncoding | 29705 | G29705- | G | - | 2 | 2 | AY.61 | 0.00021 |
noncoding | 29705 | G29705T | G | T | 2 | 2 | AY.69 | 0.000373 |
noncoding | 29705 | G29705T | G | T | 2 | 2 | AY.7.1 | 0.000225 |
noncoding | 29705 | G29705T | G | T | 2 | 2 | AY.83 | 0.003448 |
noncoding | 29705 | G29705T | G | T | 2 | 2 | AY.87 | 0.001665 |
noncoding | 29705 | G29705T | G | T | 2 | 2 | AY.89 | 0.009804 |
noncoding | 29705 | G29705T | G | T | 2 | 2 | AZ.1 | 0.001735 |
noncoding | 29705 | G29705A | G | A | 2 | 2 | B.1.1.28 | 0.000622 |
noncoding | 29705 | G29705T | G | T | 2 | 2 | B.1.1.28 | 0.000622 |
noncoding | 29705 | G29705T | G | T | 2 | 2 | B.1.1.305 | 0.007722 |
noncoding | 29705 | G29705T | G | T | 2 | 2 | B.1.1.311 | 0.000716 |
noncoding | 29705 | G29705T | G | T | 2 | 2 | B.1.1.316 | 0.00185 |
noncoding | 29705 | G29705- | G | - | 2 | 2 | B.1.1.33 | 0.000842 |
noncoding | 29705 | G29705T | G | T | 2 | 2 | B.1.189 | 0.008584 |
noncoding | 29705 | G29705- | G | - | 2 | 2 | B.1.221 | 0.000142 |
noncoding | 29705 | G29705T | G | T | 2 | 2 | B.1.36.17 | 0.000988 |
noncoding | 29705 | G29705- | G | - | 2 | 2 | B.1.36.8 | 0.002 |
noncoding | 29705 | G29705T | G | T | 2 | 2 | B.1.367 | 0.001585 |
noncoding | 29705 | G29705T | G | T | 2 | 2 | B.1.400 | 0.000858 |
noncoding | 29705 | G29705- | G | - | 2 | 2 | B.1.429 | 0.000047 |
noncoding | 29705 | G29705T | G | T | 2 | 2 | B.1.448 | 0.005249 |
noncoding | 29705 | G29705T | G | T | 2 | 2 | B.1.526 | 0.000047 |
noncoding | 29705 | G29705T | G | T | 2 | 2 | B.1.561 | 0.000794 |
noncoding | 29705 | G29705A | G | A | 2 | 2 | B.1.617.2 | 0.000008 |
noncoding | 29705 | G29705T | G | T | 2 | 2 | B.1.631 | 0.006734 |
noncoding | 29705 | G29705T | G | T | 2 | 2 | C.11 | 0.021277 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | A.1 | 0.000282 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | A.2.2 | 0.001689 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | AD.2 | 0.000219 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | AD.2 | 0.000219 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | AY.101 | 0.00049 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | AY.102 | 0.000027 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | AY.108 | 0.001103 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | AY.111 | 0.000183 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | AY.113 | 0.000142 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | AY.117 | 0.000085 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | AY.119 | 0.000035 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | AY.12 | 0.000316 |
noncoding | 29705 | G29705C | G | C | 1 | 1 | AY.12 | 0.000316 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | AY.120.1 | 0.000321 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | AY.120.2.1 | 0.000498 |
noncoding | 29705 | G29705A | G | A | 1 | 1 | AY.121 | 0.000135 |
noncoding | 29705 | G29705C | G | C | 1 | 1 | AY.121 | 0.000135 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | AY.14 | 0.000088 |
noncoding | 29705 | G29705A | G | A | 1 | 1 | AY.16.1 | 0.00047 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | AY.16.1 | 0.00047 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | AY.19 | 0.00114 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | AY.20 | 0.000039 |
noncoding | 29705 | G29705A | G | A | 1 | 1 | AY.20 | 0.000039 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | AY.23 | 0.00007 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | AY.23 | 0.00007 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | AY.26 | 0.000028 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | AY.34 | 0.000097 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | AY.34 | 0.000097 |
noncoding | 29705 | G29705C | G | C | 1 | 1 | AY.39.1 | 0.00004 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | AY.39.1 | 0.00004 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | AY.4.2.1 | 0.000149 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | AY.4.5 | 0.000107 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | AY.40 | 0.000964 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | AY.41 | 0.000294 |
noncoding | 29705 | G29705A | G | A | 1 | 1 | AY.43 | 0.000004 |
noncoding | 29705 | G29705C | G | C | 1 | 1 | AY.44 | 0.000006 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | AY.46.2 | 0.000635 |
noncoding | 29705 | G29705C | G | C | 1 | 1 | AY.46.6 | 0.000072 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | AY.46.6 | 0.000072 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | AY.48 | 0.000465 |
noncoding | 29705 | G29705C | G | C | 1 | 1 | AY.5 | 0.000021 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | AY.5 | 0.000021 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | AY.51 | 0.000909 |
noncoding | 29705 | G29705A | G | A | 1 | 1 | AY.54 | 0.000095 |
noncoding | 29705 | G29705C | G | C | 1 | 1 | AY.6 | 0.000041 |
noncoding | 29705 | G29705A | G | A | 1 | 1 | AY.62 | 0.000436 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | AY.62 | 0.000436 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | AY.71 | 0.000475 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | AY.75 | 0.000056 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | AY.77 | 0.001127 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | AY.84 | 0.000437 |
noncoding | 29705 | G29705C | G | C | 1 | 1 | AY.84 | 0.000437 |
noncoding | 29705 | G29705A | G | A | 1 | 1 | AY.9.2 | 0.000037 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | AY.91 | 0.00073 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | AY.91 | 0.00073 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | AY.93 | 0.000273 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | AY.94 | 0.000443 |
noncoding | 29705 | G29705C | G | C | 1 | 1 | AY.99 | 0.001049 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | AZ.2 | 0.000821 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B | 0.000128 |
noncoding | 29705 | G29705A | G | A | 1 | 1 | B.1 | 0.000009 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.1.1 | 0.000327 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.1.128 | 0.007092 |
noncoding | 29705 | G29705C | G | C | 1 | 1 | B.1.1.139 | 0.022727 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.1.170 | 0.001247 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.1.189 | 0.001513 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | B.1.1.197 | 0.037037 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | B.1.1.218 | 0.007692 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | B.1.1.222 | 0.000204 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.1.254 | 0.011236 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.1.277 | 0.000759 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | B.1.1.277 | 0.000759 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.1.294 | 0.001266 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.1.304 | 0.002809 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | B.1.1.305 | 0.003861 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.1.326 | 0.001761 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | B.1.1.348 | 0.000796 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.1.371 | 0.010417 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.1.378 | 0.007299 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.1.39 | 0.00051 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.1.409 | 0.002833 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | B.1.1.409 | 0.002833 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.1.50 | 0.000679 |
noncoding | 29705 | G29705A | G | A | 1 | 1 | B.1.160 | 0.000031 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.177.32 | 0.00135 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.177.54 | 0.000606 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.177.6 | 0.000977 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | B.1.177.63 | 0.002703 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.199 | 0.004132 |
noncoding | 29705 | G29705C | G | C | 1 | 1 | B.1.2 | 0.000009 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | B.1.222 | 0.001692 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.258 | 0.000067 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | B.1.258 | 0.000067 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | B.1.258.16 | 0.001637 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.260 | 0.003344 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | B.1.298 | 0.002114 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.325 | 0.006897 |
noncoding | 29705 | G29705A | G | A | 1 | 1 | B.1.351 | 0.00003 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.351.2 | 0.000303 |
noncoding | 29705 | G29705A | G | A | 1 | 1 | B.1.351.3 | 0.000876 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.36.10 | 0.004785 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.36.18 | 0.00042 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.36.22 | 0.001208 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | B.1.36.29 | 0.000517 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | B.1.36.31 | 0.001751 |
noncoding | 29705 | G29705A | G | A | 1 | 1 | B.1.36.36 | 0.000602 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.36.8 | 0.001 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.369 | 0.000285 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.371 | 0.001122 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.416 | 0.001269 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | B.1.438.1 | 0.000107 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | B.1.443 | 0.004673 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | B.1.466.2 | 0.000391 |
noncoding | 29705 | G29705A | G | A | 1 | 1 | B.1.497 | 0.000315 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | B.1.517 | 0.000427 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.521 | 0.004975 |
noncoding | 29705 | G29705A | G | A | 1 | 1 | B.1.524 | 0.001406 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.555 | 0.022222 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.567 | 0.003333 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | B.1.582 | 0.000491 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.589 | 0.007576 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.609 | 0.000479 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.617.1 | 0.000129 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | B.1.617.3 | 0.002985 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.620 | 0.000946 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | B.1.621 | 0.000089 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.1.628 | 0.000352 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | B.1.637 | 0.000073 |
noncoding | 29705 | G29705A | G | A | 1 | 1 | B.3 | 0.000831 |
noncoding | 29705 | G29705A | G | A | 1 | 1 | B.3.1 | 0.001658 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | B.4 | 0.002208 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | B.6 | 0.00091 |
noncoding | 29705 | G29705A | G | A | 1 | 1 | C.14 | 0.004329 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | C.36 | 0.000911 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | C.37.1 | 0.002618 |
noncoding | 29705 | G29705C | G | C | 1 | 1 | P.1 | 0.000016 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | P.1.15 | 0.000232 |
noncoding | 29705 | G29705C | G | C | 1 | 1 | P.1.15 | 0.000232 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | P.1.17 | 0.000162 |
noncoding | 29705 | G29705T | G | T | 1 | 1 | P.1.7 | 0.000319 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | P.2 | 0.000187 |
noncoding | 29705 | G29705C | G | C | 1 | 1 | P.2 | 0.000187 |
noncoding | 29705 | G29705- | G | - | 1 | 1 | P.7 | 0.004367 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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