CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = noncoding : CodonNum = 29705

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
noncoding29705G29705TnoncodingGT62496249129705-29705
noncoding29705G29705-noncodingG-203203129705-29705
noncoding29705G29705CnoncodingGC107107129705-29705
noncoding29705G29705AnoncodingGA4747129705-29705

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
noncoding29705G29705TGT62496249All0.001195
noncoding29705G29705TGT24882488AY.700.518766
noncoding29705G29705TGT568568AY.40.000884
noncoding29705G29705TGT498498B.1.3750.408197
noncoding29705G29705TGT411411AY.430.001821
noncoding29705G29705TGT295295AY.9.10.024699
noncoding29705G29705TGT250250B.1.1.70.000224
noncoding29705G29705TGT210210B.1.10.00381
noncoding29705G29705-G-203203All0.000039
noncoding29705G29705TGT178178B.1.617.20.00067
noncoding29705G29705CGC107107All0.00002
noncoding29705G29705TGT9696B.10.000879
noncoding29705G29705TGT7777B.1.1170.9625
noncoding29705G29705TGT6767AY.250.000403
noncoding29705G29705TGT6565B.1.1.1651
noncoding29705G29705TGT6464AY.440.00039
noncoding29705G29705TGT6262AY.1030.000385
noncoding29705G29705TGT5757AY.1000.002622
noncoding29705G29705TGT5151AY.200.001982
noncoding29705G29705AGA4747All0.000009
noncoding29705G29705TGT3838B.1.1.5190.001509
noncoding29705G29705TGT3737AY.4.20.000802
noncoding29705G29705TGT3333AY.1020.000875
noncoding29705G29705TGT3232B.1.4220.025995
noncoding29705G29705TGT3030AY.470.000933
noncoding29705G29705TGT3030AY.50.000619
noncoding29705G29705CGC2222AY.1030.000137
noncoding29705G29705TGT2222AY.750.001232
noncoding29705G29705TGT2222B.1.5960.001917
noncoding29705G29705CGC2121AY.410.006173
noncoding29705G29705TGT2020AY.30.000199
noncoding29705G29705TGT1818AY.990.018888
noncoding29705G29705TGT1818B.1.20.000158
noncoding29705G29705TGT1616AY.240.006897
noncoding29705G29705TGT1616AY.60.000658
noncoding29705G29705TGT1515AY.330.001002
noncoding29705G29705TGT1515AY.390.000371
noncoding29705G29705-G-1515B.1.1.70.000013
noncoding29705G29705CGC1414AY.30.000139
noncoding29705G29705TGT1313AY.900.008898
noncoding29705G29705TGT1313B.1.1.2160.011576
noncoding29705G29705-G-1212AY.250.000072
noncoding29705G29705TGT1212AY.260.00034
noncoding29705G29705TGT1212AY.420.000483
noncoding29705G29705CGC1212AY.430.000053
noncoding29705G29705TGT1111A.20.00728
noncoding29705G29705-G-1111AY.40.000017
noncoding29705G29705TGT1010A0.00387
noncoding29705G29705TGT1010AY.1110.001832
noncoding29705G29705TGT1010AY.1210.001353
noncoding29705G29705TGT1010AY.270.000647
noncoding29705G29705TGT1010AY.460.001041
noncoding29705G29705TGT1010AY.75.10.001803
noncoding29705G29705TGT1010B.1.3510.000297
noncoding29705G29705CGC1010B.1.617.20.000038
noncoding29705G29705TGT1010P.10.000158
noncoding29705G29705TGT99AY.1200.000335
noncoding29705G29705-G-99AY.30.00009
noncoding29705G29705TGT99B.1.177.210.000688
noncoding29705G29705TGT99B.1.4690.032491
noncoding29705G29705-G-88AY.440.000049
noncoding29705G29705-G-88B.10.000073
noncoding29705G29705TGT88B.1.2430.000557
noncoding29705G29705-G-88B.1.617.20.00003
noncoding29705G29705TGT88B.1.6370.000585
noncoding29705G29705TGT77A.210.019391
noncoding29705G29705TGT77AY.1090.005178
noncoding29705G29705TGT77AY.1190.000247
noncoding29705G29705TGT77AY.90.000473
noncoding29705G29705TGT77B.1.1.2220.001428
noncoding29705G29705-G-77B.1.1.460.030568
noncoding29705G29705-G-77B.1.20.000062
noncoding29705G29705-G-77B.1.2100.014925
noncoding29705G29705TGT66AY.1160.001721
noncoding29705G29705TGT66AY.360.000889
noncoding29705G29705CGC66AY.40.000009
noncoding29705G29705-G-66AY.430.000027
noncoding29705G29705TGT66AY.9.20.00022
noncoding29705G29705CGC66B.1.1.70.000005
noncoding29705G29705-G-66B.1.160.330.026549
noncoding29705G29705TGT66B.1.2400.001293
noncoding29705G29705TGT66B.1.360.000875
noncoding29705G29705TGT66B.1.4290.000141
noncoding29705G29705AGA55AY.40.000008
noncoding29705G29705TGT55AY.980.000395
noncoding29705G29705TGT55B.1.1600.000156
noncoding29705G29705-G-55B.1.1770.000066
noncoding29705G29705AGA44AY.23.10.001669
noncoding29705G29705-G-44AY.390.000099
noncoding29705G29705TGT44AY.450.000487
noncoding29705G29705TGT44AY.46.40.000658
noncoding29705G29705TGT44AY.46.60.000289
noncoding29705G29705-G-44B.1.10.000073
noncoding29705G29705TGT44B.1.1.2140.000222
noncoding29705G29705TGT44B.1.36.350.010417
noncoding29705G29705-G-44P.10.000063
noncoding29705G29705TGT44P.20.000747
noncoding29705G29705-G-33AY.1030.000019
noncoding29705G29705-G-33AY.1090.002219
noncoding29705G29705AGA33AY.250.000018
noncoding29705G29705-G-33AY.290.000047
noncoding29705G29705TGT33AY.290.000047
noncoding29705G29705TGT33AY.530.000863
noncoding29705G29705TGT33AY.610.000314
noncoding29705G29705TGT33AY.98.10.000145
noncoding29705G29705AGA33B0.000383
noncoding29705G29705-G-33B.1.1.1940.014851
noncoding29705G29705TGT33B.1.1.250.001706
noncoding29705G29705-G-33B.1.1.3060.001315
noncoding29705G29705TGT33B.1.1.3180.000905
noncoding29705G29705TGT33B.1.1770.00004
noncoding29705G29705TGT33B.1.2360.00616
noncoding29705G29705TGT33B.1.258.170.000312
noncoding29705G29705TGT33B.1.36.290.001552
noncoding29705G29705TGT33B.1.4270.000151
noncoding29705G29705AGA33B.550.00885
noncoding29705G29705-G-33C.370.000348
noncoding29705G29705TGT33C.370.000348
noncoding29705G29705TGT33D.20.000225
noncoding29705G29705AGA220.111111
noncoding29705G29705AGA22A0.000774
noncoding29705G29705TGT22A.2.50.000998
noncoding29705G29705TGT22AE.30.064516
noncoding29705G29705AGA22AY.1030.000012
noncoding29705G29705TGT22AY.1060.00067
noncoding29705G29705TGT22AY.1180.000125
noncoding29705G29705TGT22AY.140.000176
noncoding29705G29705TGT22AY.3.10.000171
noncoding29705G29705-G-22AY.3.10.000171
noncoding29705G29705TGT22AY.350.000466
noncoding29705G29705AGA22AY.440.000012
noncoding29705G29705-G-22AY.450.000243
noncoding29705G29705TGT22AY.46.50.000397
noncoding29705G29705-G-22AY.470.000062
noncoding29705G29705TGT22AY.5.40.000553
noncoding29705G29705TGT22AY.540.000191
noncoding29705G29705CGC22AY.590.001059
noncoding29705G29705-G-22AY.610.00021
noncoding29705G29705TGT22AY.690.000373
noncoding29705G29705TGT22AY.7.10.000225
noncoding29705G29705TGT22AY.830.003448
noncoding29705G29705TGT22AY.870.001665
noncoding29705G29705TGT22AY.890.009804
noncoding29705G29705TGT22AZ.10.001735
noncoding29705G29705AGA22B.1.1.280.000622
noncoding29705G29705TGT22B.1.1.280.000622
noncoding29705G29705TGT22B.1.1.3050.007722
noncoding29705G29705TGT22B.1.1.3110.000716
noncoding29705G29705TGT22B.1.1.3160.00185
noncoding29705G29705-G-22B.1.1.330.000842
noncoding29705G29705TGT22B.1.1890.008584
noncoding29705G29705-G-22B.1.2210.000142
noncoding29705G29705TGT22B.1.36.170.000988
noncoding29705G29705-G-22B.1.36.80.002
noncoding29705G29705TGT22B.1.3670.001585
noncoding29705G29705TGT22B.1.4000.000858
noncoding29705G29705-G-22B.1.4290.000047
noncoding29705G29705TGT22B.1.4480.005249
noncoding29705G29705TGT22B.1.5260.000047
noncoding29705G29705TGT22B.1.5610.000794
noncoding29705G29705AGA22B.1.617.20.000008
noncoding29705G29705TGT22B.1.6310.006734
noncoding29705G29705TGT22C.110.021277
noncoding29705G29705-G-11A.10.000282
noncoding29705G29705TGT11A.2.20.001689
noncoding29705G29705TGT11AD.20.000219
noncoding29705G29705-G-11AD.20.000219
noncoding29705G29705TGT11AY.1010.00049
noncoding29705G29705-G-11AY.1020.000027
noncoding29705G29705TGT11AY.1080.001103
noncoding29705G29705-G-11AY.1110.000183
noncoding29705G29705TGT11AY.1130.000142
noncoding29705G29705-G-11AY.1170.000085
noncoding29705G29705-G-11AY.1190.000035
noncoding29705G29705TGT11AY.120.000316
noncoding29705G29705CGC11AY.120.000316
noncoding29705G29705TGT11AY.120.10.000321
noncoding29705G29705-G-11AY.120.2.10.000498
noncoding29705G29705AGA11AY.1210.000135
noncoding29705G29705CGC11AY.1210.000135
noncoding29705G29705-G-11AY.140.000088
noncoding29705G29705AGA11AY.16.10.00047
noncoding29705G29705TGT11AY.16.10.00047
noncoding29705G29705TGT11AY.190.00114
noncoding29705G29705-G-11AY.200.000039
noncoding29705G29705AGA11AY.200.000039
noncoding29705G29705-G-11AY.230.00007
noncoding29705G29705TGT11AY.230.00007
noncoding29705G29705-G-11AY.260.000028
noncoding29705G29705TGT11AY.340.000097
noncoding29705G29705-G-11AY.340.000097
noncoding29705G29705CGC11AY.39.10.00004
noncoding29705G29705TGT11AY.39.10.00004
noncoding29705G29705TGT11AY.4.2.10.000149
noncoding29705G29705TGT11AY.4.50.000107
noncoding29705G29705-G-11AY.400.000964
noncoding29705G29705TGT11AY.410.000294
noncoding29705G29705AGA11AY.430.000004
noncoding29705G29705CGC11AY.440.000006
noncoding29705G29705-G-11AY.46.20.000635
noncoding29705G29705CGC11AY.46.60.000072
noncoding29705G29705-G-11AY.46.60.000072
noncoding29705G29705TGT11AY.480.000465
noncoding29705G29705CGC11AY.50.000021
noncoding29705G29705-G-11AY.50.000021
noncoding29705G29705TGT11AY.510.000909
noncoding29705G29705AGA11AY.540.000095
noncoding29705G29705CGC11AY.60.000041
noncoding29705G29705AGA11AY.620.000436
noncoding29705G29705-G-11AY.620.000436
noncoding29705G29705TGT11AY.710.000475
noncoding29705G29705-G-11AY.750.000056
noncoding29705G29705TGT11AY.770.001127
noncoding29705G29705TGT11AY.840.000437
noncoding29705G29705CGC11AY.840.000437
noncoding29705G29705AGA11AY.9.20.000037
noncoding29705G29705TGT11AY.910.00073
noncoding29705G29705-G-11AY.910.00073
noncoding29705G29705TGT11AY.930.000273
noncoding29705G29705-G-11AY.940.000443
noncoding29705G29705CGC11AY.990.001049
noncoding29705G29705-G-11AZ.20.000821
noncoding29705G29705TGT11B0.000128
noncoding29705G29705AGA11B.10.000009
noncoding29705G29705TGT11B.1.1.10.000327
noncoding29705G29705TGT11B.1.1.1280.007092
noncoding29705G29705CGC11B.1.1.1390.022727
noncoding29705G29705TGT11B.1.1.1700.001247
noncoding29705G29705TGT11B.1.1.1890.001513
noncoding29705G29705-G-11B.1.1.1970.037037
noncoding29705G29705-G-11B.1.1.2180.007692
noncoding29705G29705-G-11B.1.1.2220.000204
noncoding29705G29705TGT11B.1.1.2540.011236
noncoding29705G29705TGT11B.1.1.2770.000759
noncoding29705G29705-G-11B.1.1.2770.000759
noncoding29705G29705TGT11B.1.1.2940.001266
noncoding29705G29705TGT11B.1.1.3040.002809
noncoding29705G29705-G-11B.1.1.3050.003861
noncoding29705G29705TGT11B.1.1.3260.001761
noncoding29705G29705-G-11B.1.1.3480.000796
noncoding29705G29705TGT11B.1.1.3710.010417
noncoding29705G29705TGT11B.1.1.3780.007299
noncoding29705G29705TGT11B.1.1.390.00051
noncoding29705G29705TGT11B.1.1.4090.002833
noncoding29705G29705-G-11B.1.1.4090.002833
noncoding29705G29705TGT11B.1.1.500.000679
noncoding29705G29705AGA11B.1.1600.000031
noncoding29705G29705TGT11B.1.177.320.00135
noncoding29705G29705TGT11B.1.177.540.000606
noncoding29705G29705TGT11B.1.177.60.000977
noncoding29705G29705-G-11B.1.177.630.002703
noncoding29705G29705TGT11B.1.1990.004132
noncoding29705G29705CGC11B.1.20.000009
noncoding29705G29705-G-11B.1.2220.001692
noncoding29705G29705TGT11B.1.2580.000067
noncoding29705G29705-G-11B.1.2580.000067
noncoding29705G29705-G-11B.1.258.160.001637
noncoding29705G29705TGT11B.1.2600.003344
noncoding29705G29705-G-11B.1.2980.002114
noncoding29705G29705TGT11B.1.3250.006897
noncoding29705G29705AGA11B.1.3510.00003
noncoding29705G29705TGT11B.1.351.20.000303
noncoding29705G29705AGA11B.1.351.30.000876
noncoding29705G29705TGT11B.1.36.100.004785
noncoding29705G29705TGT11B.1.36.180.00042
noncoding29705G29705TGT11B.1.36.220.001208
noncoding29705G29705-G-11B.1.36.290.000517
noncoding29705G29705-G-11B.1.36.310.001751
noncoding29705G29705AGA11B.1.36.360.000602
noncoding29705G29705TGT11B.1.36.80.001
noncoding29705G29705TGT11B.1.3690.000285
noncoding29705G29705TGT11B.1.3710.001122
noncoding29705G29705TGT11B.1.4160.001269
noncoding29705G29705-G-11B.1.438.10.000107
noncoding29705G29705-G-11B.1.4430.004673
noncoding29705G29705-G-11B.1.466.20.000391
noncoding29705G29705AGA11B.1.4970.000315
noncoding29705G29705-G-11B.1.5170.000427
noncoding29705G29705TGT11B.1.5210.004975
noncoding29705G29705AGA11B.1.5240.001406
noncoding29705G29705TGT11B.1.5550.022222
noncoding29705G29705TGT11B.1.5670.003333
noncoding29705G29705-G-11B.1.5820.000491
noncoding29705G29705TGT11B.1.5890.007576
noncoding29705G29705TGT11B.1.6090.000479
noncoding29705G29705TGT11B.1.617.10.000129
noncoding29705G29705-G-11B.1.617.30.002985
noncoding29705G29705TGT11B.1.6200.000946
noncoding29705G29705-G-11B.1.6210.000089
noncoding29705G29705TGT11B.1.6280.000352
noncoding29705G29705-G-11B.1.6370.000073
noncoding29705G29705AGA11B.30.000831
noncoding29705G29705AGA11B.3.10.001658
noncoding29705G29705TGT11B.40.002208
noncoding29705G29705-G-11B.60.00091
noncoding29705G29705AGA11C.140.004329
noncoding29705G29705TGT11C.360.000911
noncoding29705G29705TGT11C.37.10.002618
noncoding29705G29705CGC11P.10.000016
noncoding29705G29705-G-11P.1.150.000232
noncoding29705G29705CGC11P.1.150.000232
noncoding29705G29705-G-11P.1.170.000162
noncoding29705G29705TGT11P.1.70.000319
noncoding29705G29705-G-11P.20.000187
noncoding29705G29705CGC11P.20.000187
noncoding29705G29705-G-11P.70.004367