CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = noncoding : CodonNum = 29686

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
noncoding29686C29686TnoncodingCT88368836129686-29686
noncoding29686C29686GnoncodingCG13171317129686-29686
noncoding29686C29686-noncodingC-359359129686-29686
noncoding29686C29686AnoncodingCA4242129686-29686

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
noncoding29686C29686TCT88368836All0.00169
noncoding29686C29686TCT15751575B.1.1.70.00141
noncoding29686C29686GCG13171317All0.000252
noncoding29686C29686TCT10891089B.1.177.170.894089
noncoding29686C29686GCG908908B.1.1.70.000813
noncoding29686C29686TCT546546B.1.10.009905
noncoding29686C29686TCT512512AY.440.003116
noncoding29686C29686TCT491491AY.40.000764
noncoding29686C29686TCT484484AY.330.032321
noncoding29686C29686GCG364364AY.40.000567
noncoding29686C29686-C-359359All0.000069
noncoding29686C29686TCT340340AY.1030.002111
noncoding29686C29686TCT279279AY.430.001236
noncoding29686C29686TCT275275B.1.617.20.001035
noncoding29686C29686TCT225225A.210.623269
noncoding29686C29686TCT219219AY.250.001317
noncoding29686C29686TCT192192B.1.1770.002528
noncoding29686C29686TCT173173AY.290.002729
noncoding29686C29686TCT132132B.1.5260.003103
noncoding29686C29686TCT116116B.1.177.810.021961
noncoding29686C29686TCT115115AY.1200.004276
noncoding29686C29686TCT109109B.1.20.00096
noncoding29686C29686TCT101101B.10.000925
noncoding29686C29686TCT7171AY.1020.001882
noncoding29686C29686TCT5959AY.470.001835
noncoding29686C29686TCT5252P.1.140.002486
noncoding29686C29686TCT5252P.1.170.008412
noncoding29686C29686TCT4848P.10.000756
noncoding29686C29686TCT4646B.1.5250.005205
noncoding29686C29686TCT4545AY.30.000448
noncoding29686C29686TCT4343B.1.438.40.914894
noncoding29686C29686ACA4242All0.000008
noncoding29686C29686TCT4242AY.60.001727
noncoding29686C29686TCT4040B.1.4290.000941
noncoding29686C29686-C-3838AY.40.000059
noncoding29686C29686-C-3838B.1.1.70.000034
noncoding29686C29686TCT3838B.1.4270.001919
noncoding29686C29686TCT3434AY.4.20.000737
noncoding29686C29686TCT3434B.1.4000.014586
noncoding29686C29686-C-3232AY.1030.000199
noncoding29686C29686TCT3232C.370.003714
noncoding29686C29686TCT2929AY.460.003018
noncoding29686C29686TCT2828B.1.177.380.291667
noncoding29686C29686-C-2828B.1.20.000247
noncoding29686C29686TCT2727B.1.690.964286
noncoding29686C29686TCT2525AY.390.000618
noncoding29686C29686TCT2525AY.50.000516
noncoding29686C29686TCT2525B.1.3510.000743
noncoding29686C29686TCT2323B.1.1600.000717
noncoding29686C29686-C-2323B.1.617.20.000087
noncoding29686C29686TCT2222AY.1180.001378
noncoding29686C29686TCT2222B.1.6370.001608
noncoding29686C29686TCT2222C.36.30.012479
noncoding29686C29686TCT2020B.1.1.5190.000794
noncoding29686C29686TCT1919AY.940.008411
noncoding29686C29686TCT1818AY.360.002668
noncoding29686C29686TCT1818B.1.1.2220.003672
noncoding29686C29686TCT1818B.1.3700.144
noncoding29686C29686TCT1717AY.120.005373
noncoding29686C29686-C-1717AY.470.000529
noncoding29686C29686TCT1717P.1.10.0054
noncoding29686C29686-C-1616AY.250.000096
noncoding29686C29686TCT1616AY.260.000453
noncoding29686C29686TCT1616AY.340.001551
noncoding29686C29686TCT1616AY.730.010645
noncoding29686C29686TCT1616B.1.1.3170.006587
noncoding29686C29686TCT1616B.1.2580.001065
noncoding29686C29686ACA1616B.1.5260.000376
noncoding29686C29686TCT1616B.1.6210.001416
noncoding29686C29686-C-1515AY.440.000091
noncoding29686C29686TCT1414P.20.002613
noncoding29686C29686TCT1313AY.1000.000598
noncoding29686C29686TCT1313AY.230.000907
noncoding29686C29686TCT1313B.1.1260.016582
noncoding29686C29686TCT1313B.1.3750.010656
noncoding29686C29686TCT1212AY.1170.001014
noncoding29686C29686TCT1212AY.130.001932
noncoding29686C29686TCT1212AY.39.10.000475
noncoding29686C29686TCT1212B.1.1.2140.000665
noncoding29686C29686TCT1212B.1.1.280.003735
noncoding29686C29686TCT1111AY.1060.003684
noncoding29686C29686-C-1111B.10.000101
noncoding29686C29686TCT1111B.1.360.001605
noncoding29686C29686TCT1111B.1.36.260.031429
noncoding29686C29686TCT1111B.1.5960.000959
noncoding29686C29686TCT1010B.1.1.3060.004384
noncoding29686C29686-C-1010B.1.1770.000132
noncoding29686C29686TCT1010B.1.2210.00071
noncoding29686C29686TCT1010B.1.2430.000696
noncoding29686C29686TCT1010B.1.5820.004907
noncoding29686C29686TCT99AY.200.00035
noncoding29686C29686TCT99AY.450.001095
noncoding29686C29686TCT99AY.9.20.000331
noncoding29686C29686TCT99B.1.1.2980.007759
noncoding29686C29686TCT99B.1.177.540.005458
noncoding29686C29686TCT99B.1.617.10.001161
noncoding29686C29686TCT99N.40.038298
noncoding29686C29686TCT99P.1.150.002091
noncoding29686C29686TCT88AY.610.000838
noncoding29686C29686TCT88AY.99.20.000737
noncoding29686C29686TCT88B0.001022
noncoding29686C29686TCT88B.1.466.20.00313
noncoding29686C29686GCG88B.1.617.20.00003
noncoding29686C29686GCG88Q.80.001319
noncoding29686C29686-C-88R.10.00072
noncoding29686C29686TCT77AY.1160.002007
noncoding29686C29686TCT77AY.750.000392
noncoding29686C29686TCT77B.1.438.10.000751
noncoding29686C29686TCT66A0.002322
noncoding29686C29686TCT66A.2.50.002994
noncoding29686C29686TCT66AY.46.50.00119
noncoding29686C29686TCT66AY.590.003178
noncoding29686C29686TCT66B.400.002186
noncoding29686C29686TCT66D.20.00045
noncoding29686C29686TCT66Q.80.000989
noncoding29686C29686TCT55AY.1130.000712
noncoding29686C29686TCT55AY.1190.000177
noncoding29686C29686TCT55AY.280.009452
noncoding29686C29686-C-55AY.30.00005
noncoding29686C29686TCT55AY.4.2.10.000745
noncoding29686C29686TCT55AY.420.000201
noncoding29686C29686TCT55AY.5.30.001687
noncoding29686C29686TCT55AY.740.000578
noncoding29686C29686TCT55AY.75.10.000902
noncoding29686C29686-C-55AY.9.20.000184
noncoding29686C29686-C-55B.1.10.000091
noncoding29686C29686TCT55B.1.1.2160.004452
noncoding29686C29686ACA55B.1.1.5190.000199
noncoding29686C29686TCT55B.1.1.5230.007812
noncoding29686C29686TCT55B.1.177.600.001092
noncoding29686C29686TCT55B.1.2400.001078
noncoding29686C29686-C-55B.1.2580.000333
noncoding29686C29686TCT55B.1.258.30.008375
noncoding29686C29686TCT55B.1.416.10.007812
noncoding29686C29686-C-55B.1.4290.000118
noncoding29686C29686TCT55B.1.4380.03268
noncoding29686C29686TCT44A.190.037736
noncoding29686C29686TCT44AY.1110.000733
noncoding29686C29686TCT44AY.1210.000541
noncoding29686C29686GCG44AY.250.000024
noncoding29686C29686-C-44AY.430.000018
noncoding29686C29686TCT44AY.5.40.001107
noncoding29686C29686TCT44AY.510.003636
noncoding29686C29686TCT44AY.850.001709
noncoding29686C29686TCT44AY.890.019608
noncoding29686C29686TCT44AY.90.00027
noncoding29686C29686TCT44AY.980.000316
noncoding29686C29686ACA44B.10.000037
noncoding29686C29686GCG44B.10.000037
noncoding29686C29686TCT44B.1.1.1700.004988
noncoding29686C29686TCT44B.1.1.3160.0037
noncoding29686C29686ACA44B.1.1.70.000004
noncoding29686C29686TCT44B.1.36.160.005698
noncoding29686C29686TCT44B.1.36.290.002069
noncoding29686C29686TCT44B.1.5640.001704
noncoding29686C29686TCT44B.1.6280.001409
noncoding29686C29686-C-44P.10.000063
noncoding29686C29686TCT44P.1.160.001496
noncoding29686C29686TCT44P.1.70.001277
noncoding29686C29686TCT44Q.30.00058
noncoding29686C29686TCT33A.23.10.002113
noncoding29686C29686TCT33AU.20.007264
noncoding29686C29686GCG33AY.1020.00008
noncoding29686C29686-C-33AY.290.000047
noncoding29686C29686TCT33AY.29.10.000662
noncoding29686C29686-C-33AY.3.10.000256
noncoding29686C29686-C-33AY.46.40.000494
noncoding29686C29686TCT33AY.690.00056
noncoding29686C29686-C-33AY.750.000168
noncoding29686C29686TCT33AY.98.10.000145
noncoding29686C29686GCG33B.1.10.000054
noncoding29686C29686-C-33B.1.1.1940.014851
noncoding29686C29686TCT33B.1.1.2650.009464
noncoding29686C29686TCT33B.1.1.4160.002715
noncoding29686C29686TCT33B.1.1.700.001023
noncoding29686C29686TCT33B.1.177.210.000229
noncoding29686C29686TCT33B.1.177.430.004431
noncoding29686C29686TCT33B.1.214.30.021429
noncoding29686C29686TCT33B.1.2340.000396
noncoding29686C29686TCT33B.1.36.380.004926
noncoding29686C29686TCT33B.1.5020.157895
noncoding29686C29686-C-33C.370.000348
noncoding29686C29686ACA22A.10.000564
noncoding29686C29686-C-22AD.20.000438
noncoding29686C29686-C-22AY.1020.000053
noncoding29686C29686TCT22AY.1140.000462
noncoding29686C29686TCT22AY.116.10.000623
noncoding29686C29686TCT22AY.120.20.002571
noncoding29686C29686TCT22AY.20.000712
noncoding29686C29686TCT22AY.210.003795
noncoding29686C29686TCT22AY.240.000862
noncoding29686C29686ACA22AY.30.00002
noncoding29686C29686TCT22AY.320.001065
noncoding29686C29686-C-22AY.390.000049
noncoding29686C29686TCT22AY.4.50.000215
noncoding29686C29686-C-22AY.46.60.000144
noncoding29686C29686-C-22AY.50.000041
noncoding29686C29686TCT22AY.520.001629
noncoding29686C29686TCT22AY.530.000575
noncoding29686C29686-C-22AY.610.00021
noncoding29686C29686-C-22AY.620.000871
noncoding29686C29686-C-22AY.640.00119
noncoding29686C29686TCT22AY.70.000392
noncoding29686C29686TCT22AY.7.10.000225
noncoding29686C29686TCT22AY.9.10.000167
noncoding29686C29686TCT22AY.920.000575
noncoding29686C29686TCT22B.1.1.10.000653
noncoding29686C29686TCT22B.1.1.1180.020408
noncoding29686C29686TCT22B.1.1.1530.002191
noncoding29686C29686TCT22B.1.1.1580.02439
noncoding29686C29686TCT22B.1.1.250.001137
noncoding29686C29686TCT22B.1.1.2690.002706
noncoding29686C29686TCT22B.1.1.2840.000215
noncoding29686C29686TCT22B.1.1.3110.000716
noncoding29686C29686-C-22B.1.1.4160.00181
noncoding29686C29686-C-22B.1.1.460.008734
noncoding29686C29686TCT22B.1.1.500.001358
noncoding29686C29686TCT22B.1.110.30.001437
noncoding29686C29686TCT22B.1.160.260.004843
noncoding29686C29686-C-22B.1.160.330.00885
noncoding29686C29686TCT22B.1.177.750.002081
noncoding29686C29686GCG22B.1.177.810.000379
noncoding29686C29686TCT22B.1.2100.004264
noncoding29686C29686TCT22B.1.214.20.001199
noncoding29686C29686-C-22B.1.2210.000142
noncoding29686C29686ACA22B.1.2580.000133
noncoding29686C29686TCT22B.1.2670.037037
noncoding29686C29686TCT22B.1.2930.025
noncoding29686C29686TCT22B.1.3490.00143
noncoding29686C29686TCT22B.1.36.10.002281
noncoding29686C29686-C-22B.1.36.290.001035
noncoding29686C29686-C-22B.1.3620.003082
noncoding29686C29686TCT22B.1.4370.041667
noncoding29686C29686TCT22B.1.4700.002809
noncoding29686C29686GCG22B.1.4700.002809
noncoding29686C29686TCT22B.1.4800.004975
noncoding29686C29686TCT22B.1.5090.001732
noncoding29686C29686TCT22B.1.5750.000607
noncoding29686C29686TCT22B.1.5760.001813
noncoding29686C29686-C-22B.1.5960.000174
noncoding29686C29686TCT22B.1.6090.000959
noncoding29686C29686TCT22B.1.6190.001742
noncoding29686C29686TCT22P.50.027397
noncoding29686C29686-C-11A.10.000282
noncoding29686C29686TCT11A.2.20.001689
noncoding29686C29686TCT11A.2.5.30.010309
noncoding29686C29686TCT11A.270.001656
noncoding29686C29686TCT11AU.10.001266
noncoding29686C29686ACA11AY.10.000396
noncoding29686C29686TCT11AY.1040.001984
noncoding29686C29686TCT11AY.1100.000113
noncoding29686C29686-C-11AY.1170.000085
noncoding29686C29686-C-11AY.1180.000063
noncoding29686C29686TCT11AY.140.000088
noncoding29686C29686TCT11AY.16.10.00047
noncoding29686C29686-C-11AY.200.000039
noncoding29686C29686-C-11AY.230.00007
noncoding29686C29686ACA11AY.250.000006
noncoding29686C29686TCT11AY.270.000065
noncoding29686C29686-C-11AY.330.000067
noncoding29686C29686-C-11AY.340.000097
noncoding29686C29686GCG11AY.340.000097
noncoding29686C29686TCT11AY.370.000316
noncoding29686C29686TCT11AY.380.000499
noncoding29686C29686TCT11AY.39.1.10.000725
noncoding29686C29686ACA11AY.4.20.000022
noncoding29686C29686-C-11AY.4.20.000022
noncoding29686C29686TCT11AY.4.30.000842
noncoding29686C29686TCT11AY.4.40.000409
noncoding29686C29686TCT11AY.410.000294
noncoding29686C29686ACA11AY.440.000006
noncoding29686C29686GCG11AY.440.000006
noncoding29686C29686GCG11AY.450.000122
noncoding29686C29686-C-11AY.450.000122
noncoding29686C29686-C-11AY.46.10.001027
noncoding29686C29686TCT11AY.46.20.000635
noncoding29686C29686TCT11AY.46.60.000072
noncoding29686C29686TCT11AY.490.003195
noncoding29686C29686-C-11AY.5.30.000337
noncoding29686C29686TCT11AY.570.000656
noncoding29686C29686TCT11AY.620.000436
noncoding29686C29686TCT11AY.640.000595
noncoding29686C29686-C-11AY.650.000533
noncoding29686C29686TCT11AY.680.000274
noncoding29686C29686-C-11AY.680.000274
noncoding29686C29686-C-11AY.720.001361
noncoding29686C29686-C-11AY.75.10.00018
noncoding29686C29686TCT11AY.780.001541
noncoding29686C29686TCT11AY.790.001211
noncoding29686C29686TCT11AY.800.001129
noncoding29686C29686TCT11AY.820.001357
noncoding29686C29686TCT11AY.840.000437
noncoding29686C29686-C-11AY.890.004902
noncoding29686C29686-C-11AY.9.10.000084
noncoding29686C29686TCT11AY.900.000684
noncoding29686C29686-C-11AY.910.00073
noncoding29686C29686TCT11AY.910.00073
noncoding29686C29686GCG11AY.950.000761
noncoding29686C29686TCT11AY.950.000761
noncoding29686C29686GCG11AY.99.20.000092
noncoding29686C29686-C-11B0.000128
noncoding29686C29686GCG11B0.000128
noncoding29686C29686TCT11B.1.1.1210.002427
noncoding29686C29686TCT11B.1.1.1440.028571
noncoding29686C29686TCT11B.1.1.1740.003378
noncoding29686C29686TCT11B.1.1.1960.005714
noncoding29686C29686-C-11B.1.1.1970.037037
noncoding29686C29686GCG11B.1.1.2140.000055
noncoding29686C29686-C-11B.1.1.2180.007692
noncoding29686C29686TCT11B.1.1.2200.001859
noncoding29686C29686TCT11B.1.1.2260.005814
noncoding29686C29686-C-11B.1.1.2690.001353
noncoding29686C29686-C-11B.1.1.2770.000759
noncoding29686C29686TCT11B.1.1.2900.018182
noncoding29686C29686TCT11B.1.1.2910.000742
noncoding29686C29686TCT11B.1.1.2940.001266
noncoding29686C29686TCT11B.1.1.3040.002809
noncoding29686C29686TCT11B.1.1.3330.001076
noncoding29686C29686TCT11B.1.1.3480.000796
noncoding29686C29686TCT11B.1.1.3690.000446
noncoding29686C29686TCT11B.1.1.370.000193
noncoding29686C29686-C-11B.1.1.370.000193
noncoding29686C29686TCT11B.1.1.3720.000689
noncoding29686C29686TCT11B.1.1.3890.006061
noncoding29686C29686TCT11B.1.1.390.00051
noncoding29686C29686TCT11B.1.1.3910.008547
noncoding29686C29686TCT11B.1.1.4120.007634
noncoding29686C29686TCT11B.1.1.4200.001006
noncoding29686C29686TCT11B.1.1.440.00241
noncoding29686C29686TCT11B.1.1.4480.002033
noncoding29686C29686TCT11B.1.1.460.004367
noncoding29686C29686TCT11B.1.1.4620.008621
noncoding29686C29686-C-11B.1.1.5190.00004
noncoding29686C29686TCT11B.1.1.5210.005348
noncoding29686C29686TCT11B.1.1.5250.005464
noncoding29686C29686-C-11B.1.1.700.000341
noncoding29686C29686TCT11B.1.1170.0125
noncoding29686C29686TCT11B.1.1280.000635
noncoding29686C29686TCT11B.1.1470.000756
noncoding29686C29686-C-11B.1.1600.000031
noncoding29686C29686-C-11B.1.160.140.002119
noncoding29686C29686TCT11B.1.160.180.007299
noncoding29686C29686TCT11B.1.160.90.007194
noncoding29686C29686TCT11B.1.177.100.000878
noncoding29686C29686TCT11B.1.177.160.000664
noncoding29686C29686TCT11B.1.177.290.066667
noncoding29686C29686TCT11B.1.177.40.000211
noncoding29686C29686TCT11B.1.177.450.000381
noncoding29686C29686TCT11B.1.177.550.002331
noncoding29686C29686TCT11B.1.177.570.000281
noncoding29686C29686TCT11B.1.177.610.043478
noncoding29686C29686TCT11B.1.177.770.000726
noncoding29686C29686TCT11B.1.177.860.000183
noncoding29686C29686TCT11B.1.177.90.001332
noncoding29686C29686TCT11B.1.1920.009259
noncoding29686C29686GCG11B.1.2210.000071
noncoding29686C29686TCT11B.1.2370.004975
noncoding29686C29686-C-11B.1.2430.00007
noncoding29686C29686-C-11B.1.258.160.001637
noncoding29686C29686TCT11B.1.2600.003344
noncoding29686C29686TCT11B.1.2650.001271
noncoding29686C29686-C-11B.1.2980.002114
noncoding29686C29686TCT11B.1.3110.000275
noncoding29686C29686TCT11B.1.3380.008621
noncoding29686C29686TCT11B.1.351.20.000303
noncoding29686C29686-C-11B.1.351.30.000876
noncoding29686C29686TCT11B.1.36.100.004785
noncoding29686C29686TCT11B.1.36.80.001
noncoding29686C29686TCT11B.1.3610.001289
noncoding29686C29686TCT11B.1.3670.000792
noncoding29686C29686TCT11B.1.3710.001122
noncoding29686C29686TCT11B.1.3960.000706
noncoding29686C29686TCT11B.1.3980.002976
noncoding29686C29686TCT11B.1.4110.003704
noncoding29686C29686-C-11B.1.4230.010204
noncoding29686C29686GCG11B.1.4290.000024
noncoding29686C29686-C-11B.1.438.10.000107
noncoding29686C29686-C-11B.1.4430.004673
noncoding29686C29686TCT11B.1.4710.002732
noncoding29686C29686TCT11B.1.5010.007353
noncoding29686C29686TCT11B.1.5170.000427
noncoding29686C29686TCT11B.1.5330.009615
noncoding29686C29686TCT11B.1.5490.007194
noncoding29686C29686TCT11B.1.5500.013699
noncoding29686C29686TCT11B.1.5880.00091
noncoding29686C29686ACA11B.1.5950.000261
noncoding29686C29686TCT11B.1.5950.000261
noncoding29686C29686ACA11B.1.617.20.000004
noncoding29686C29686TCT11B.1.617.30.002985
noncoding29686C29686TCT11B.1.6200.000946
noncoding29686C29686-C-11B.1.6210.000089
noncoding29686C29686TCT11B.1.621.10.000506
noncoding29686C29686TCT11B.1.6230.000536
noncoding29686C29686TCT11B.1.6310.003367
noncoding29686C29686-C-11B.1.6370.000073
noncoding29686C29686TCT11B.1.90.006173
noncoding29686C29686-C-11B.3.10.001658
noncoding29686C29686-C-11B.580.010204
noncoding29686C29686TCT11B.6.60.000889
noncoding29686C29686TCT11C.160.00106
noncoding29686C29686GCG11C.370.000116
noncoding29686C29686TCT11L.10.001905
noncoding29686C29686GCG11P.10.000016
noncoding29686C29686ACA11P.1.10.000318
noncoding29686C29686TCT11P.1.120.000484
noncoding29686C29686-C-11P.1.150.000232
noncoding29686C29686-C-11P.1.170.000162
noncoding29686C29686-C-11P.1.20.001156
noncoding29686C29686TCT11P.70.004367
noncoding29686C29686TCT11Q.70.001111
noncoding29686C29686TCT11R.10.00009