CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = noncoding : CodonNum = 29553

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
noncoding29553G29553TnoncodingGT16221622129553-29553
noncoding29553G29553AnoncodingGA11791179129553-29553
noncoding29553G29553-noncodingG-118118129553-29553
noncoding29553G29553CnoncodingGC1616129553-29553

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
noncoding29553G29553TGT16221622All0.00031
noncoding29553G29553AGA11791179All0.000225
noncoding29553G29553AGA880880B.1.3710.987654
noncoding29553G29553TGT369369B.1.1.70.00033
noncoding29553G29553TGT168168B.1.617.20.000633
noncoding29553G29553TGT162162AY.1200.006023
noncoding29553G29553TGT157157AY.40.000244
noncoding29553G29553-G-118118All0.000023
noncoding29553G29553AGA8888B.10.000806
noncoding29553G29553TGT7272AY.200.002798
noncoding29553G29553TGT5858AY.1000.002668
noncoding29553G29553TGT5858AY.120.20.07455
noncoding29553G29553TGT5050AY.430.000222
noncoding29553G29553TGT4747B.1.4160.059645
noncoding29553G29553TGT3838AY.440.000231
noncoding29553G29553TGT3737B.1.20.000326
noncoding29553G29553TGT3333AY.690.00616
noncoding29553G29553TGT2929B.1.1600.000904
noncoding29553G29553AGA2727B.1.3330.284211
noncoding29553G29553AGA2626AY.440.000158
noncoding29553G29553TGT2525AY.1020.000663
noncoding29553G29553TGT2424AY.250.000144
noncoding29553G29553AGA2424B.1.1.70.000021
noncoding29553G29553TGT2323B.1.2410.018669
noncoding29553G29553AGA2222AY.60.000905
noncoding29553G29553TGT2121B.10.000192
noncoding29553G29553CGC1616All0.000003
noncoding29553G29553TGT1515B.1.10.000272
noncoding29553G29553AGA1414B.1.4460.28
noncoding29553G29553TGT1313AY.1030.000081
noncoding29553G29553-G-1313AY.40.00002
noncoding29553G29553-G-1212B.1.1.70.000011
noncoding29553G29553-G-1010AY.250.00006
noncoding29553G29553AGA1010AY.40.000016
noncoding29553G29553-G-1010B.1.1.1530.010953
noncoding29553G29553TGT1010P.10.000158
noncoding29553G29553TGT99AY.46.40.001481
noncoding29553G29553-G-99B.10.000082
noncoding29553G29553TGT77AY.290.00011
noncoding29553G29553CGC77AY.9.20.000257
noncoding29553G29553-G-77B.1.617.20.000026
noncoding29553G29553TGT66AY.330.000401
noncoding29553G29553TGT66AY.50.000124
noncoding29553G29553AGA66B.1.1.3180.001811
noncoding29553G29553TGT66B.1.1.3970.013514
noncoding29553G29553AGA66B.1.20.000053
noncoding29553G29553-G-66B.1.2580.000399
noncoding29553G29553AGA66B.1.617.20.000023
noncoding29553G29553TGT55AY.120.2.10.002491
noncoding29553G29553TGT55AY.30.00005
noncoding29553G29553AGA55AY.30.00005
noncoding29553G29553TGT55AY.80.00303
noncoding29553G29553TGT55AY.9.20.000184
noncoding29553G29553TGT55B.1.5260.000118
noncoding29553G29553TGT55C.370.00058
noncoding29553G29553TGT44AY.1170.000338
noncoding29553G29553AGA44AY.1180.000251
noncoding29553G29553TGT44AY.230.000279
noncoding29553G29553CGC44AY.40.000006
noncoding29553G29553TGT44AY.420.000161
noncoding29553G29553TGT44AY.470.000124
noncoding29553G29553-G-44AY.9.20.000147
noncoding29553G29553TGT44B.1.1.5190.000159
noncoding29553G29553AGA44B.1.1600.000125
noncoding29553G29553TGT44B.1.2580.000266
noncoding29553G29553AGA44C.350.003096
noncoding29553G29553AGA44P.10.000063
noncoding29553G29553TGT44Q.80.00066
noncoding29553G29553AGA33AY.1020.00008
noncoding29553G29553AGA33AY.1030.000019
noncoding29553G29553TGT33AY.1210.000406
noncoding29553G29553TGT33AY.260.000085
noncoding29553G29553-G-33AY.430.000013
noncoding29553G29553TGT33AY.450.000365
noncoding29553G29553TGT33B.1.1700.012931
noncoding29553G29553AGA33B.1.1770.00004
noncoding29553G29553TGT33B.1.3110.000824
noncoding29553G29553TGT33B.1.5600.013889
noncoding29553G29553TGT33B.1.5960.000261
noncoding29553G29553TGT33P.20.00056
noncoding29553G29553TGT22A0.000774
noncoding29553G29553TGT22AY.1050.001286
noncoding29553G29553TGT22AY.1140.000462
noncoding29553G29553TGT22AY.120.10.000642
noncoding29553G29553TGT22AY.130.000322
noncoding29553G29553AGA22AY.230.000139
noncoding29553G29553AGA22AY.250.000012
noncoding29553G29553CGC22AY.330.000134
noncoding29553G29553TGT22AY.390.000049
noncoding29553G29553TGT22AY.4.20.000043
noncoding29553G29553-G-22AY.440.000012
noncoding29553G29553TGT22AY.460.000208
noncoding29553G29553TGT22AY.46.50.000397
noncoding29553G29553-G-22AY.470.000062
noncoding29553G29553TGT22AY.750.000112
noncoding29553G29553AGA22AY.9.20.000073
noncoding29553G29553-G-22AY.980.000158
noncoding29553G29553TGT22AY.99.20.000184
noncoding29553G29553AGA22B.1.10.000036
noncoding29553G29553TGT22B.1.1.2220.000408
noncoding29553G29553TGT22B.1.1.2690.002706
noncoding29553G29553TGT22B.1.1.2790.002242
noncoding29553G29553-G-22B.1.1600.000062
noncoding29553G29553AGA22B.1.177.100.001756
noncoding29553G29553TGT22B.1.177.440.001038
noncoding29553G29553TGT22B.1.177.860.000367
noncoding29553G29553-G-22B.1.20.000018
noncoding29553G29553AGA22B.1.3510.000059
noncoding29553G29553TGT22B.1.360.000292
noncoding29553G29553AGA22B.1.4270.000101
noncoding29553G29553TGT22B.1.5240.002813
noncoding29553G29553-G-22B.1.5250.000226
noncoding29553G29553TGT22C.350.001548
noncoding29553G29553-G-22P.10.000032
noncoding29553G29553TGT22P.70.008734
noncoding29553G29553AGA11A0.000387
noncoding29553G29553TGT11AY.100.00053
noncoding29553G29553TGT11AY.1080.001103
noncoding29553G29553TGT11AY.1130.000142
noncoding29553G29553TGT11AY.1160.000287
noncoding29553G29553-G-11AY.1170.000085
noncoding29553G29553TGT11AY.1190.000035
noncoding29553G29553-G-11AY.130.000161
noncoding29553G29553TGT11AY.20.000356
noncoding29553G29553TGT11AY.240.000431
noncoding29553G29553-G-11AY.260.000028
noncoding29553G29553TGT11AY.270.000065
noncoding29553G29553AGA11AY.290.000016
noncoding29553G29553-G-11AY.290.000016
noncoding29553G29553TGT11AY.29.10.000221
noncoding29553G29553-G-11AY.30.00001
noncoding29553G29553TGT11AY.3.10.000085
noncoding29553G29553TGT11AY.370.000316
noncoding29553G29553-G-11AY.380.000499
noncoding29553G29553AGA11AY.4.20.000022
noncoding29553G29553-G-11AY.4.20.000022
noncoding29553G29553CGC11AY.430.000004
noncoding29553G29553AGA11AY.430.000004
noncoding29553G29553AGA11AY.460.000104
noncoding29553G29553TGT11AY.46.10.001027
noncoding29553G29553TGT11AY.46.60.000072
noncoding29553G29553-G-11AY.46.60.000072
noncoding29553G29553AGA11AY.470.000031
noncoding29553G29553AGA11AY.50.000021
noncoding29553G29553-G-11AY.50.000021
noncoding29553G29553TGT11AY.5.30.000337
noncoding29553G29553-G-11AY.5.30.000337
noncoding29553G29553TGT11AY.540.000095
noncoding29553G29553TGT11AY.550.000917
noncoding29553G29553TGT11AY.60.000041
noncoding29553G29553CGC11AY.610.000105
noncoding29553G29553TGT11AY.620.000436
noncoding29553G29553-G-11AY.620.000436
noncoding29553G29553-G-11AY.650.000533
noncoding29553G29553AGA11AY.670.000464
noncoding29553G29553AGA11AY.710.000475
noncoding29553G29553TGT11AY.740.000116
noncoding29553G29553TGT11AY.75.10.00018
noncoding29553G29553TGT11AY.780.001541
noncoding29553G29553TGT11AY.860.00083
noncoding29553G29553TGT11AY.90.000068
noncoding29553G29553-G-11AY.9.10.000084
noncoding29553G29553TGT11AY.920.000287
noncoding29553G29553TGT11AY.930.000273
noncoding29553G29553TGT11AY.980.000079
noncoding29553G29553AGA11AY.98.10.000048
noncoding29553G29553TGT11AY.98.10.000048
noncoding29553G29553-G-11AY.98.10.000048
noncoding29553G29553-G-11AY.990.001049
noncoding29553G29553TGT11B0.000128
noncoding29553G29553CGC11B.10.000009
noncoding29553G29553-G-11B.1.10.000018
noncoding29553G29553TGT11B.1.1.10.000327
noncoding29553G29553AGA11B.1.1.1180.010204
noncoding29553G29553TGT11B.1.1.270.00565
noncoding29553G29553TGT11B.1.1.280.000311
noncoding29553G29553TGT11B.1.1.3060.000438
noncoding29553G29553TGT11B.1.1.3160.000925
noncoding29553G29553TGT11B.1.1.3260.001761
noncoding29553G29553TGT11B.1.1.3480.000796
noncoding29553G29553AGA11B.1.1.370.000193
noncoding29553G29553-G-11B.1.1.370.000193
noncoding29553G29553TGT11B.1.1.4090.002833
noncoding29553G29553-G-11B.1.1.4200.001006
noncoding29553G29553AGA11B.1.1.4860.001577
noncoding29553G29553AGA11B.1.1.5190.00004
noncoding29553G29553TGT11B.1.1.700.000341
noncoding29553G29553TGT11B.1.1390.000733
noncoding29553G29553TGT11B.1.1770.000013
noncoding29553G29553-G-11B.1.1770.000013
noncoding29553G29553TGT11B.1.177.40.000211
noncoding29553G29553AGA11B.1.177.630.002703
noncoding29553G29553TGT11B.1.177.650.000665
noncoding29553G29553-G-11B.1.177.830.001481
noncoding29553G29553AGA11B.1.177.860.000183
noncoding29553G29553-G-11B.1.2120.016667
noncoding29553G29553TGT11B.1.2430.00007
noncoding29553G29553AGA11B.1.2580.000067
noncoding29553G29553-G-11B.1.258.160.001637
noncoding29553G29553AGA11B.1.3290.000608
noncoding29553G29553AGA11B.1.3380.008621
noncoding29553G29553AGA11B.1.351.20.000303
noncoding29553G29553TGT11B.1.3560.001727
noncoding29553G29553TGT11B.1.36.160.001425
noncoding29553G29553TGT11B.1.36.240.006173
noncoding29553G29553TGT11B.1.36.350.002604
noncoding29553G29553-G-11B.1.3960.000706
noncoding29553G29553-G-11B.1.4150.014286
noncoding29553G29553-G-11B.1.4270.00005
noncoding29553G29553AGA11B.1.4280.00102
noncoding29553G29553-G-11B.1.438.10.000107
noncoding29553G29553TGT11B.1.5380.008065
noncoding29553G29553-G-11B.1.5960.000087
noncoding29553G29553AGA11B.1.5960.000087
noncoding29553G29553TGT11B.1.6210.000089
noncoding29553G29553TGT11B.1.6270.00202
noncoding29553G29553TGT11B.1.88.10.004808
noncoding29553G29553AGA11B.4.50.011905
noncoding29553G29553TGT11B.60.00091
noncoding29553G29553AGA11C.370.000116
noncoding29553G29553-G-11C.370.000116
noncoding29553G29553TGT11C.37.10.002618
noncoding29553G29553TGT11D.20.000075
noncoding29553G29553TGT11N.30.005814
noncoding29553G29553-G-11P.1.10.000318
noncoding29553G29553TGT11P.1.150.000232
noncoding29553G29553AGA11P.1.170.000162
noncoding29553G29553TGT11P.1.170.000162
noncoding29553G29553AGA11P.1.70.000319
noncoding29553G29553TGT11P.30.001595
noncoding29553G29553-G-11Q.20.000613