CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = noncoding : CodonNum = 29550

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
noncoding29550C29550TnoncodingCT14701470129550-29550
noncoding29550C29550-noncodingC-116116129550-29550
noncoding29550C29550AnoncodingCA1818129550-29550
noncoding29550C29550GnoncodingCG55129550-29550

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
noncoding29550C29550TCT14701470All0.000281
noncoding29550C29550TCT307307B.1.1.70.000275
noncoding29550C29550TCT287287B.1.617.20.001081
noncoding29550C29550TCT124124B.10.001136
noncoding29550C29550-C-116116All0.000022
noncoding29550C29550TCT105105AY.40.000163
noncoding29550C29550TCT7777AY.440.000469
noncoding29550C29550TCT7171AY.920.020396
noncoding29550C29550TCT6262P.10.000977
noncoding29550C29550TCT5757B.1.5630.966102
noncoding29550C29550TCT5050AY.290.000789
noncoding29550C29550TCT4040AY.1020.001061
noncoding29550C29550TCT3232AY.1030.000199
noncoding29550C29550TCT3232B.1.3750.02623
noncoding29550C29550TCT2424AY.430.000106
noncoding29550C29550ACA1818All0.000003
noncoding29550C29550TCT1212B.1.10.000218
noncoding29550C29550-C-1212B.1.1.70.000011
noncoding29550C29550-C-1111AY.40.000017
noncoding29550C29550TCT1010AY.250.00006
noncoding29550C29550TCT1010AY.390.000247
noncoding29550C29550-C-1010B.10.000092
noncoding29550C29550-C-1010B.1.1.1530.010953
noncoding29550C29550TCT99AY.130.001449
noncoding29550C29550-C-99AY.250.000054
noncoding29550C29550TCT77AY.470.000218
noncoding29550C29550-C-77B.1.617.20.000026
noncoding29550C29550TCT66AY.340.000582
noncoding29550C29550TCT66B.1.20.000053
noncoding29550C29550GCG55All0.000001
noncoding29550C29550TCT55AY.260.000142
noncoding29550C29550TCT55AY.50.000103
noncoding29550C29550TCT55AY.560.008026
noncoding29550C29550-C-55B.1.2580.000333
noncoding29550C29550TCT55P.1.140.000239
noncoding29550C29550TCT44AY.200.000155
noncoding29550C29550ACA44AY.250.000024
noncoding29550C29550TCT44AY.4.20.000087
noncoding29550C29550-C-44AY.9.20.000147
noncoding29550C29550TCT44B.1.1.1010.04
noncoding29550C29550TCT44B.1.5260.000094
noncoding29550C29550TCT33AY.1170.000254
noncoding29550C29550TCT33AY.1180.000188
noncoding29550C29550TCT33AY.120.2.10.001495
noncoding29550C29550TCT33AY.330.0002
noncoding29550C29550-C-33AY.430.000013
noncoding29550C29550TCT33AY.46.20.001906
noncoding29550C29550TCT33AY.980.000237
noncoding29550C29550TCT33B.1.1770.00004
noncoding29550C29550TCT33B.1.2580.0002
noncoding29550C29550TCT33B.1.4290.000071
noncoding29550C29550TCT33P.1.70.000958
noncoding29550C29550TCT22AY.1000.000092
noncoding29550C29550TCT22AY.1190.000071
noncoding29550C29550TCT22AY.230.000139
noncoding29550C29550-C-22AY.290.000032
noncoding29550C29550TCT22AY.29.10.000441
noncoding29550C29550TCT22AY.30.00002
noncoding29550C29550TCT22AY.370.000632
noncoding29550C29550-C-22AY.440.000012
noncoding29550C29550-C-22AY.470.000062
noncoding29550C29550TCT22AY.5.30.000675
noncoding29550C29550TCT22AY.7.10.000225
noncoding29550C29550-C-22AY.980.000158
noncoding29550C29550ACA22B.10.000018
noncoding29550C29550ACA22B.1.1.280.000622
noncoding29550C29550TCT22B.1.1.700.000682
noncoding29550C29550-C-22B.1.1600.000062
noncoding29550C29550ACA22B.1.1770.000026
noncoding29550C29550-C-22B.1.20.000018
noncoding29550C29550TCT22B.1.2320.001075
noncoding29550C29550TCT22B.1.3510.000059
noncoding29550C29550TCT22B.1.360.000292
noncoding29550C29550TCT22B.1.36.100.009569
noncoding29550C29550TCT22B.1.4270.000101
noncoding29550C29550-C-22B.1.5250.000226
noncoding29550C29550TCT22B.1.6210.000177
noncoding29550C29550-C-22P.10.000032
noncoding29550C29550ACA11A0.000387
noncoding29550C29550TCT11AY.100.00053
noncoding29550C29550ACA11AY.1020.000027
noncoding29550C29550GCG11AY.1030.000006
noncoding29550C29550TCT11AY.1110.000183
noncoding29550C29550TCT11AY.1130.000142
noncoding29550C29550TCT11AY.1140.000231
noncoding29550C29550TCT11AY.1160.000287
noncoding29550C29550-C-11AY.1170.000085
noncoding29550C29550TCT11AY.1200.000037
noncoding29550C29550TCT11AY.1210.000135
noncoding29550C29550-C-11AY.130.000161
noncoding29550C29550TCT11AY.160.00038
noncoding29550C29550-C-11AY.260.000028
noncoding29550C29550-C-11AY.30.00001
noncoding29550C29550TCT11AY.320.000532
noncoding29550C29550TCT11AY.34.10.00051
noncoding29550C29550-C-11AY.380.000499
noncoding29550C29550ACA11AY.40.000002
noncoding29550C29550-C-11AY.4.20.000022
noncoding29550C29550TCT11AY.420.00004
noncoding29550C29550GCG11AY.430.000004
noncoding29550C29550TCT11AY.450.000122
noncoding29550C29550TCT11AY.46.30.000934
noncoding29550C29550TCT11AY.46.40.000165
noncoding29550C29550ACA11AY.46.40.000165
noncoding29550C29550-C-11AY.46.60.000072
noncoding29550C29550-C-11AY.50.000021
noncoding29550C29550-C-11AY.5.30.000337
noncoding29550C29550GCG11AY.510.000909
noncoding29550C29550TCT11AY.520.000814
noncoding29550C29550TCT11AY.610.000105
noncoding29550C29550-C-11AY.620.000436
noncoding29550C29550TCT11AY.640.000595
noncoding29550C29550-C-11AY.650.000533
noncoding29550C29550TCT11AY.650.000533
noncoding29550C29550GCG11AY.7.10.000113
noncoding29550C29550TCT11AY.750.000056
noncoding29550C29550TCT11AY.790.001211
noncoding29550C29550-C-11AY.9.10.000084
noncoding29550C29550TCT11AY.910.00073
noncoding29550C29550ACA11AY.980.000079
noncoding29550C29550-C-11AY.98.10.000048
noncoding29550C29550-C-11AY.990.001049
noncoding29550C29550-C-11B.1.10.000018
noncoding29550C29550TCT11B.1.1.1170.009709
noncoding29550C29550TCT11B.1.1.1590.004673
noncoding29550C29550TCT11B.1.1.2090.008929
noncoding29550C29550TCT11B.1.1.2220.000204
noncoding29550C29550TCT11B.1.1.2840.000107
noncoding29550C29550-C-11B.1.1.370.000193
noncoding29550C29550ACA11B.1.1.3980.003226
noncoding29550C29550-C-11B.1.1.4200.001006
noncoding29550C29550TCT11B.1.1.50.008333
noncoding29550C29550-C-11B.1.1770.000013
noncoding29550C29550TCT11B.1.177.60.000977
noncoding29550C29550TCT11B.1.177.630.002703
noncoding29550C29550ACA11B.1.177.730.000566
noncoding29550C29550-C-11B.1.177.830.001481
noncoding29550C29550ACA11B.1.20.000009
noncoding29550C29550-C-11B.1.2120.016667
noncoding29550C29550TCT11B.1.2180.005155
noncoding29550C29550TCT11B.1.2340.000132
noncoding29550C29550-C-11B.1.258.160.001637
noncoding29550C29550TCT11B.1.36.10.00114
noncoding29550C29550TCT11B.1.36.180.00042
noncoding29550C29550TCT11B.1.3620.001541
noncoding29550C29550TCT11B.1.3690.000285
noncoding29550C29550TCT11B.1.3710.001122
noncoding29550C29550TCT11B.1.3960.000706
noncoding29550C29550-C-11B.1.3960.000706
noncoding29550C29550TCT11B.1.4040.001302
noncoding29550C29550-C-11B.1.4150.014286
noncoding29550C29550TCT11B.1.4160.001269
noncoding29550C29550-C-11B.1.4270.00005
noncoding29550C29550-C-11B.1.438.10.000107
noncoding29550C29550TCT11B.1.5200.021739
noncoding29550C29550TCT11B.1.5620.018519
noncoding29550C29550TCT11B.1.5730.006098
noncoding29550C29550-C-11B.1.5960.000087
noncoding29550C29550TCT11B.1.6100.003546
noncoding29550C29550GCG11B.1.617.20.000004
noncoding29550C29550TCT11C.370.000116
noncoding29550C29550-C-11C.370.000116
noncoding29550C29550-C-11P.1.10.000318
noncoding29550C29550TCT11P.1.150.000232
noncoding29550C29550-C-11Q.20.000613
noncoding29550C29550TCT11R.10.00009