CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = noncoding : CodonNum = 29540

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
noncoding29540G29540AnoncodingGA50225022129540-29540
noncoding29540G29540TnoncodingGT920920129540-29540
noncoding29540G29540-noncodingG-7070129540-29540
noncoding29540G29540CnoncodingGC3636129540-29540

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
noncoding29540G29540AGA50225022All0.000961
noncoding29540G29540AGA14861486B.10.013611
noncoding29540G29540AGA11861186AY.40.001846
noncoding29540G29540AGA949949B.1.4990.996849
noncoding29540G29540TGT920920All0.000176
noncoding29540G29540AGA394394B.1.5030.9801
noncoding29540G29540AGA221221B.1.5050.969298
noncoding29540G29540AGA153153B.1.1.70.000137
noncoding29540G29540AGA126126B.1.5010.926471
noncoding29540G29540TGT109109AY.40.00017
noncoding29540G29540TGT104104B.1.1.70.000093
noncoding29540G29540TGT100100B.1.617.20.000377
noncoding29540G29540TGT9090B.1.10.001633
noncoding29540G29540AGA8383B.1.5070.932584
noncoding29540G29540-G-7070All0.000013
noncoding29540G29540TGT5353AY.430.000235
noncoding29540G29540TGT5050AY.440.000304
noncoding29540G29540TGT4545B.1.5990.164234
noncoding29540G29540AGA3838B.1.5080.974359
noncoding29540G29540TGT3737B.10.000339
noncoding29540G29540AGA3737B.1.5060.880952
noncoding29540G29540CGC3636All0.000007
noncoding29540G29540AGA3535B.1.4980.714286
noncoding29540G29540TGT3232AY.120.10.010273
noncoding29540G29540AGA3131B.1.5040.96875
noncoding29540G29540AGA2525B.1.6151
noncoding29540G29540AGA2424B.1.6110.96
noncoding29540G29540AGA2222AY.1140.005084
noncoding29540G29540TGT2222AY.1190.000777
noncoding29540G29540AGA2121B.1.617.20.000079
noncoding29540G29540TGT2020AY.1030.000124
noncoding29540G29540TGT2020AY.250.00012
noncoding29540G29540AGA1919B.1.5021
noncoding29540G29540AGA1414B.1.5000.736842
noncoding29540G29540TGT1313B.1.20.000114
noncoding29540G29540TGT1111AY.1210.001488
noncoding29540G29540AGA1111AY.4.20.000239
noncoding29540G29540CGC1111AY.430.000049
noncoding29540G29540CGC1111B.1.1.70.00001
noncoding29540G29540TGT1111P.10.000173
noncoding29540G29540AGA1010AY.1020.000265
noncoding29540G29540AGA1010AY.440.000061
noncoding29540G29540AGA99AY.390.000222
noncoding29540G29540AGA99B.1.499.11
noncoding29540G29540TGT88AY.30.00008
noncoding29540G29540TGT88AY.98.10.000387
noncoding29540G29540TGT77AY.390.000173
noncoding29540G29540TGT77AY.7.10.000789
noncoding29540G29540-G-77B.1.1.70.000006
noncoding29540G29540TGT77B.1.2430.000487
noncoding29540G29540AGA66AY.30.00006
noncoding29540G29540-G-66B.10.000055
noncoding29540G29540TGT66B.1.1.3010.007075
noncoding29540G29540TGT66B.1.1600.000187
noncoding29540G29540-G-66B.1.617.20.000023
noncoding29540G29540TGT66P.1.140.000287
noncoding29540G29540TGT55AY.1020.000133
noncoding29540G29540AGA55AY.1030.000031
noncoding29540G29540TGT55AY.20.001781
noncoding29540G29540-G-55AY.40.000008
noncoding29540G29540TGT55AY.610.000524
noncoding29540G29540TGT55B.1.438.10.000536
noncoding29540G29540TGT55B.1.5750.001517
noncoding29540G29540CGC44AY.440.000024
noncoding29540G29540TGT44AY.50.000083
noncoding29540G29540-G-44AY.9.20.000147
noncoding29540G29540AGA44B.1.10.000073
noncoding29540G29540TGT44D.20.0003
noncoding29540G29540TGT33AY.1090.002219
noncoding29540G29540TGT33AY.116.10.000934
noncoding29540G29540-G-33AY.250.000018
noncoding29540G29540TGT33AY.290.000047
noncoding29540G29540TGT33AY.3.10.000256
noncoding29540G29540TGT33AY.340.000291
noncoding29540G29540TGT33AY.350.000699
noncoding29540G29540AGA33AY.430.000013
noncoding29540G29540TGT33AY.770.003382
noncoding29540G29540TGT33AY.90.000203
noncoding29540G29540TGT33B.1.177.70.000495
noncoding29540G29540-G-33B.1.20.000026
noncoding29540G29540AGA33B.1.20.000026
noncoding29540G29540TGT33B.1.2210.000213
noncoding29540G29540-G-33B.1.2580.0002
noncoding29540G29540TGT33B.1.3110.000824
noncoding29540G29540AGA33B.1.3510.000089
noncoding29540G29540AGA33B.1.3620.004622
noncoding29540G29540AGA33B.1.5260.000071
noncoding29540G29540TGT33B.1.5960.000261
noncoding29540G29540AGA22AY.1100.000225
noncoding29540G29540TGT22AY.1160.000574
noncoding29540G29540TGT22AY.230.000139
noncoding29540G29540TGT22AY.270.000129
noncoding29540G29540-G-22AY.290.000032
noncoding29540G29540TGT22AY.420.00008
noncoding29540G29540-G-22AY.430.000009
noncoding29540G29540-G-22AY.440.000012
noncoding29540G29540TGT22AY.450.000243
noncoding29540G29540TGT22AY.460.000208
noncoding29540G29540TGT22AY.46.60.000144
noncoding29540G29540AGA22AY.50.000041
noncoding29540G29540TGT22AY.550.001835
noncoding29540G29540TGT22AY.750.000112
noncoding29540G29540AGA22AY.870.001665
noncoding29540G29540TGT22AY.880.001768
noncoding29540G29540TGT22AY.9.20.000073
noncoding29540G29540-G-22B.1.10.000036
noncoding29540G29540TGT22B.1.1.2140.000111
noncoding29540G29540TGT22B.1.1.3170.000823
noncoding29540G29540TGT22B.1.1.3890.012121
noncoding29540G29540AGA22B.1.1.5260.007092
noncoding29540G29540AGA22B.1.1570.00597
noncoding29540G29540AGA22B.1.160.100.016129
noncoding29540G29540AGA22B.1.1770.000026
noncoding29540G29540AGA22B.1.177.730.001133
noncoding29540G29540TGT22B.1.177.810.000379
noncoding29540G29540TGT22B.1.2320.001075
noncoding29540G29540TGT22B.1.2580.000133
noncoding29540G29540AGA22B.1.3020.026667
noncoding29540G29540TGT22B.1.360.000292
noncoding29540G29540AGA22B.1.36.290.001035
noncoding29540G29540AGA22B.1.3670.001585
noncoding29540G29540TGT22B.1.4280.002041
noncoding29540G29540TGT22B.1.4290.000047
noncoding29540G29540AGA22B.1.4390.011834
noncoding29540G29540AGA22B.1.4930.051282
noncoding29540G29540TGT22B.1.5250.000226
noncoding29540G29540AGA22B.1.5440.012048
noncoding29540G29540AGA22B.1.5950.000522
noncoding29540G29540TGT22B.1.5950.000522
noncoding29540G29540AGA22B.1.6210.000177
noncoding29540G29540-G-22P.10.000032
noncoding29540G29540TGT22P.20.000373
noncoding29540G29540CGC11A.2.50.000499
noncoding29540G29540TGT11A.23.10.000704
noncoding29540G29540TGT11AY.1000.000046
noncoding29540G29540AGA11AY.1000.000046
noncoding29540G29540-G-11AY.1170.000085
noncoding29540G29540AGA11AY.1190.000035
noncoding29540G29540TGT11AY.1200.000037
noncoding29540G29540-G-11AY.130.000161
noncoding29540G29540AGA11AY.200.000039
noncoding29540G29540-G-11AY.260.000028
noncoding29540G29540AGA11AY.290.000016
noncoding29540G29540AGA11AY.300.000396
noncoding29540G29540TGT11AY.330.000067
noncoding29540G29540CGC11AY.330.000067
noncoding29540G29540TGT11AY.360.000148
noncoding29540G29540AGA11AY.360.000148
noncoding29540G29540-G-11AY.360.000148
noncoding29540G29540TGT11AY.370.000316
noncoding29540G29540-G-11AY.380.000499
noncoding29540G29540-G-11AY.4.20.000022
noncoding29540G29540TGT11AY.400.000964
noncoding29540G29540AGA11AY.420.00004
noncoding29540G29540TGT11AY.470.000031
noncoding29540G29540-G-11AY.470.000031
noncoding29540G29540TGT11AY.480.000465
noncoding29540G29540-G-11AY.50.000021
noncoding29540G29540AGA11AY.510.000909
noncoding29540G29540AGA11AY.540.000095
noncoding29540G29540TGT11AY.620.000436
noncoding29540G29540-G-11AY.620.000436
noncoding29540G29540AGA11AY.650.000533
noncoding29540G29540AGA11AY.670.000464
noncoding29540G29540AGA11AY.690.000187
noncoding29540G29540TGT11AY.790.001211
noncoding29540G29540TGT11AY.9.10.000084
noncoding29540G29540-G-11AY.9.10.000084
noncoding29540G29540-G-11AY.980.000079
noncoding29540G29540-G-11AY.98.10.000048
noncoding29540G29540-G-11AY.990.001049
noncoding29540G29540AGA11B.1.1.1280.007092
noncoding29540G29540AGA11B.1.1.1350.004695
noncoding29540G29540TGT11B.1.1.1410.002012
noncoding29540G29540TGT11B.1.1.1610.003534
noncoding29540G29540AGA11B.1.1.1960.005714
noncoding29540G29540TGT11B.1.1.2020.076923
noncoding29540G29540AGA11B.1.1.2140.000055
noncoding29540G29540AGA11B.1.1.2220.000204
noncoding29540G29540TGT11B.1.1.2220.000204
noncoding29540G29540AGA11B.1.1.2690.001353
noncoding29540G29540AGA11B.1.1.270.00565
noncoding29540G29540AGA11B.1.1.3350.012987
noncoding29540G29540-G-11B.1.1.370.000193
noncoding29540G29540TGT11B.1.1.370.000193
noncoding29540G29540AGA11B.1.1.4090.002833
noncoding29540G29540AGA11B.1.1.4400.011765
noncoding29540G29540AGA11B.1.1.500.000679
noncoding29540G29540TGT11B.1.1.5190.00004
noncoding29540G29540AGA11B.1.1.5190.00004
noncoding29540G29540TGT11B.1.1.580.005376
noncoding29540G29540CGC11B.1.1.630.000386
noncoding29540G29540AGA11B.1.1400.018868
noncoding29540G29540TGT11B.1.1450.052632
noncoding29540G29540-G-11B.1.1600.000031
noncoding29540G29540AGA11B.1.1600.000031
noncoding29540G29540-G-11B.1.1770.000013
noncoding29540G29540TGT11B.1.177.170.000821
noncoding29540G29540AGA11B.1.177.440.000519
noncoding29540G29540AGA11B.1.177.630.002703
noncoding29540G29540-G-11B.1.177.830.001481
noncoding29540G29540CGC11B.1.20.000009
noncoding29540G29540TGT11B.1.220.001318
noncoding29540G29540AGA11B.1.2400.000216
noncoding29540G29540CGC11B.1.2580.000067
noncoding29540G29540-G-11B.1.258.160.001637
noncoding29540G29540AGA11B.1.3160.111111
noncoding29540G29540CGC11B.1.3250.006897
noncoding29540G29540AGA11B.1.36.10.00114
noncoding29540G29540AGA11B.1.36.160.001425
noncoding29540G29540CGC11B.1.36.360.000602
noncoding29540G29540TGT11B.1.36.80.001
noncoding29540G29540AGA11B.1.3690.000285
noncoding29540G29540AGA11B.1.3980.002976
noncoding29540G29540TGT11B.1.4000.000429
noncoding29540G29540-G-11B.1.4150.014286
noncoding29540G29540TGT11B.1.4220.000812
noncoding29540G29540-G-11B.1.4270.00005
noncoding29540G29540CGC11B.1.4270.00005
noncoding29540G29540AGA11B.1.4290.000024
noncoding29540G29540-G-11B.1.438.10.000107
noncoding29540G29540CGC11B.1.438.10.000107
noncoding29540G29540-G-11B.1.4430.004673
noncoding29540G29540TGT11B.1.4620.007246
noncoding29540G29540TGT11B.1.5170.000427
noncoding29540G29540AGA11B.1.5210.004975
noncoding29540G29540TGT11B.1.5260.000024
noncoding29540G29540AGA11B.1.5760.000907
noncoding29540G29540AGA11B.1.5820.000491
noncoding29540G29540-G-11B.1.5960.000087
noncoding29540G29540AGA11B.1.5960.000087
noncoding29540G29540AGA11B.1.6010.030303
noncoding29540G29540TGT11B.1.6210.000089
noncoding29540G29540AGA11B.1.6250.002353
noncoding29540G29540TGT11B.1.6280.000352
noncoding29540G29540CGC11B.1.6360.006711
noncoding29540G29540AGA11B.1.6370.000073
noncoding29540G29540TGT11B.1.6370.000073
noncoding29540G29540AGA11B.1.9.50.005682
noncoding29540G29540AGA11B.60.00091
noncoding29540G29540AGA11N.50.001767
noncoding29540G29540AGA11P.10.000016
noncoding29540G29540TGT11P.1.170.000162
noncoding29540G29540AGA11Q.40.000455
noncoding29540G29540TGT11R.10.00009