CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = noncoding : CodonNum = 28273

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
noncoding28273A28273TnoncodingAT30793079128273-28273
noncoding28273A28273CnoncodingAC237237128273-28273
noncoding28273A28273GnoncodingAG9797128273-28273
noncoding28273A28273-noncodingA-2121128273-28273

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
noncoding28273A28273TAT30793079All0.000589
noncoding28273A28273TAT12621262B.1.214.20.756595
noncoding28273A28273TAT628628B.1.1.5230.98125
noncoding28273A28273TAT594594A.270.983444
noncoding28273A28273CAC237237All0.000045
noncoding28273A28273CAC136136P.10.002143
noncoding28273A28273TAT115115B.1.466.20.044992
noncoding28273A28273TAT105105B.1.214.40.954545
noncoding28273A28273GAG9797All0.000019
noncoding28273A28273TAT8181B.1.214.30.578571
noncoding28273A28273TAT5656B.1.6350.982456
noncoding28273A28273TAT4444B.1.10.000798
noncoding28273A28273GAG3939B.1.1.70.000035
noncoding28273A28273TAT3333B.10.000302
noncoding28273A28273TAT2121A0.008127
noncoding28273A28273-A-2121All0.000004
noncoding28273A28273CAC1919P.1.120.009197
noncoding28273A28273CAC1616B.1.5250.001811
noncoding28273A28273-A-1515B.1.1.70.000013
noncoding28273A28273TAT1414B.1.2100.029851
noncoding28273A28273TAT1414P.10.000221
noncoding28273A28273GAG1313AY.40.00002
noncoding28273A28273TAT1313B.1.1.70.000012
noncoding28273A28273CAC1212B.1.1.70.000011
noncoding28273A28273TAT1111B.1.4000.004719
noncoding28273A28273GAG88P.10.000126
noncoding28273A28273CAC88P.1.170.001294
noncoding28273A28273GAG77AY.740.00081
noncoding28273A28273TAT77B0.000895
noncoding28273A28273TAT77B.1.2430.000487
noncoding28273A28273CAC77B.1.258.170.000728
noncoding28273A28273GAG77B.1.617.20.000026
noncoding28273A28273TAT66B.1.2140.021978
noncoding28273A28273CAC66P.1.40.005859
noncoding28273A28273TAT55B.1.1310.04386
noncoding28273A28273CAC55P.1.100.001347
noncoding28273A28273TAT44B.1.1.280.001245
noncoding28273A28273TAT44B.1.20.000035
noncoding28273A28273TAT33A.290.015957
noncoding28273A28273CAC33AY.1210.000406
noncoding28273A28273CAC33P.1.20.003468
noncoding28273A28273TAT22A.30.004193
noncoding28273A28273TAT22AE.80.000978
noncoding28273A28273GAG22AY.50.000041
noncoding28273A28273TAT22B.1.1.1610.007067
noncoding28273A28273TAT22B.1.1.2080.02439
noncoding28273A28273GAG22B.1.1.2140.000111
noncoding28273A28273CAC22B.1.1.2160.001781
noncoding28273A28273TAT22B.1.214.10.04
noncoding28273A28273TAT22B.1.2210.000142
noncoding28273A28273GAG22B.1.2320.001075
noncoding28273A28273GAG22B.1.3510.000059
noncoding28273A28273TAT22B.1.4620.014493
noncoding28273A28273TAT22B.1.5760.001813
noncoding28273A28273CAC22B.1.617.10.000258
noncoding28273A28273-A-22B.1.617.20.000008
noncoding28273A28273TAT22N.60.014184
noncoding28273A28273GAG22P.1.120.000968
noncoding28273A28273CAC22P.1.150.000465
noncoding28273A28273TAT22P.1.170.000324
noncoding28273A28273CAC22Y.10.025641
noncoding28273A28273TAT11A.10.000282
noncoding28273A28273GAG11A.10.000282
noncoding28273A28273TAT11A.120.166667
noncoding28273A28273TAT11A.20.000662
noncoding28273A28273TAT11AY.1030.000006
noncoding28273A28273GAG11AY.1180.000063
noncoding28273A28273TAT11AY.16.10.00047
noncoding28273A28273GAG11AY.250.000006
noncoding28273A28273GAG11AY.330.000067
noncoding28273A28273CAC11AY.390.000025
noncoding28273A28273TAT11AY.39.10.00004
noncoding28273A28273TAT11AY.40.000002
noncoding28273A28273CAC11AY.40.000002
noncoding28273A28273GAG11AY.430.000004
noncoding28273A28273TAT11AY.430.000004
noncoding28273A28273-A-11AY.440.000006
noncoding28273A28273-A-11AY.50.000021
noncoding28273A28273GAG11AY.580.000907
noncoding28273A28273GAG11AY.670.000464
noncoding28273A28273CAC11AY.99.20.000092
noncoding28273A28273GAG11B.10.000009
noncoding28273A28273CAC11B.10.000009
noncoding28273A28273CAC11B.1.10.000018
noncoding28273A28273-A-11B.1.10.000018
noncoding28273A28273CAC11B.1.1.2140.000055
noncoding28273A28273TAT11B.1.1.2750.011236
noncoding28273A28273TAT11B.1.1.2940.001266
noncoding28273A28273GAG11B.1.1.3480.000796
noncoding28273A28273TAT11B.1.1.40.002976
noncoding28273A28273TAT11B.1.1.4090.002833
noncoding28273A28273TAT11B.1.1.4480.002033
noncoding28273A28273GAG11B.1.1.4850.016667
noncoding28273A28273TAT11B.1.1.500.000679
noncoding28273A28273TAT11B.1.1.5280.004808
noncoding28273A28273CAC11B.1.1.630.000386
noncoding28273A28273TAT11B.1.160.300.002976
noncoding28273A28273TAT11B.1.160.330.004425
noncoding28273A28273TAT11B.1.177.280.007407
noncoding28273A28273GAG11B.1.177.690.001484
noncoding28273A28273TAT11B.1.177.70.000165
noncoding28273A28273TAT11B.1.177.730.000566
noncoding28273A28273TAT11B.1.177.810.000189
noncoding28273A28273CAC11B.1.1920.009259
noncoding28273A28273TAT11B.1.1990.004132
noncoding28273A28273TAT11B.1.3510.00003
noncoding28273A28273CAC11B.1.36.170.000494
noncoding28273A28273TAT11B.1.4380.006536
noncoding28273A28273TAT11B.1.4590.004082
noncoding28273A28273GAG11B.1.5750.000303
noncoding28273A28273TAT11B.1.5960.000087
noncoding28273A28273TAT11B.1.6090.000479
noncoding28273A28273TAT11B.1.617.10.000129
noncoding28273A28273CAC11B.1.617.20.000004
noncoding28273A28273TAT11B.1.617.20.000004
noncoding28273A28273CAC11B.1.6210.000089
noncoding28273A28273TAT11C.160.00106
noncoding28273A28273TAT11N.50.001767
noncoding28273A28273-A-11P.10.000016
noncoding28273A28273CAC11P.1.10.000318
noncoding28273A28273TAT11P.1.120.000484
noncoding28273A28273CAC11P.1.130.000898
noncoding28273A28273CAC11P.1.140.000048
noncoding28273A28273GAG11P.1.150.000232