CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
noncoding | 28272 | A28272T | noncoding | A | T | 82882 | 82882 | 1 | 28272-28272 | |
noncoding | 28272 | A28272G | noncoding | A | G | 10545 | 10545 | 1 | 28272-28272 | |
noncoding | 28272 | A28272- | noncoding | A | - | 391 | 391 | 1 | 28272-28272 | |
noncoding | 28272 | A28272C | noncoding | A | C | 107 | 107 | 1 | 28272-28272 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
noncoding | 28272 | A28272T | A | T | 82882 | 82882 | All | 0.015852 |
noncoding | 28272 | A28272T | A | T | 42298 | 42298 | B.1.429 | 0.995224 |
noncoding | 28272 | A28272T | A | T | 19476 | 19476 | B.1.427 | 0.983487 |
noncoding | 28272 | A28272T | A | T | 11083 | 11083 | B.1.621 | 0.981057 |
noncoding | 28272 | A28272G | A | G | 10545 | 10545 | All | 0.002017 |
noncoding | 28272 | A28272G | A | G | 9301 | 9301 | B.1.438.1 | 0.99764 |
noncoding | 28272 | A28272T | A | T | 1977 | 1977 | B.1.621.1 | 1 |
noncoding | 28272 | A28272T | A | T | 1976 | 1976 | A.2.5 | 0.986028 |
noncoding | 28272 | A28272T | A | T | 1772 | 1772 | B.1.623 | 0.950644 |
noncoding | 28272 | A28272T | A | T | 1629 | 1629 | B.1 | 0.014921 |
noncoding | 28272 | A28272T | A | T | 634 | 634 | A.2.5.2 | 0.996855 |
noncoding | 28272 | A28272G | A | G | 409 | 409 | B.1.625 | 0.962353 |
noncoding | 28272 | A28272- | A | - | 391 | 391 | All | 0.000075 |
noncoding | 28272 | A28272T | A | T | 375 | 375 | A.28 | 0.992063 |
noncoding | 28272 | A28272T | A | T | 208 | 208 | A.2.5.1 | 1 |
noncoding | 28272 | A28272- | A | - | 194 | 194 | AV.1 | 0.979798 |
noncoding | 28272 | A28272G | A | G | 190 | 190 | B.1.630 | 0.994764 |
noncoding | 28272 | A28272T | A | T | 160 | 160 | C.1.2 | 0.680851 |
noncoding | 28272 | A28272T | A | T | 139 | 139 | B.1.632 | 0.932886 |
noncoding | 28272 | A28272- | A | - | 137 | 137 | B.1.214.2 | 0.082134 |
noncoding | 28272 | A28272T | A | T | 125 | 125 | B.1.2 | 0.001101 |
noncoding | 28272 | A28272G | A | G | 115 | 115 | B.1 | 0.001053 |
noncoding | 28272 | A28272C | A | C | 107 | 107 | All | 0.00002 |
noncoding | 28272 | A28272T | A | T | 96 | 96 | A.2.5.3 | 0.989691 |
noncoding | 28272 | A28272T | A | T | 82 | 82 | B.1.429.1 | 0.987952 |
noncoding | 28272 | A28272T | A | T | 77 | 77 | B.1.1.7 | 0.000069 |
noncoding | 28272 | A28272T | A | T | 67 | 67 | B.1.1 | 0.001215 |
noncoding | 28272 | A28272G | A | G | 65 | 65 | B.1.438 | 0.424837 |
noncoding | 28272 | A28272C | A | C | 64 | 64 | P.1 | 0.001008 |
noncoding | 28272 | A28272G | A | G | 62 | 62 | B.1.1 | 0.001125 |
noncoding | 28272 | A28272G | A | G | 59 | 59 | B.1.563 | 1 |
noncoding | 28272 | A28272T | A | T | 52 | 52 | AY.4 | 0.000081 |
noncoding | 28272 | A28272G | A | G | 52 | 52 | B.1.438.2 | 1 |
noncoding | 28272 | A28272T | A | T | 43 | 43 | B.1.1.220 | 0.079926 |
noncoding | 28272 | A28272T | A | T | 37 | 37 | B.1.596 | 0.003224 |
noncoding | 28272 | A28272T | A | T | 31 | 31 | AY.43 | 0.000137 |
noncoding | 28272 | A28272G | A | G | 31 | 31 | B.1.1.222 | 0.006324 |
noncoding | 28272 | A28272T | A | T | 31 | 31 | C.36.3.1 | 0.084239 |
noncoding | 28272 | A28272G | A | G | 30 | 30 | B.1.1.1 | 0.009801 |
noncoding | 28272 | A28272T | A | T | 30 | 30 | B.1.239 | 0.03663 |
noncoding | 28272 | A28272G | A | G | 30 | 30 | N.10 | 0.882353 |
noncoding | 28272 | A28272T | A | T | 26 | 26 | B | 0.003323 |
noncoding | 28272 | A28272T | A | T | 25 | 25 | B.1.311 | 0.006864 |
noncoding | 28272 | A28272T | A | T | 24 | 24 | B.1.633 | 1 |
noncoding | 28272 | A28272G | A | G | 23 | 23 | A.2.4 | 0.077441 |
noncoding | 28272 | A28272T | A | T | 23 | 23 | B.1.367 | 0.018225 |
noncoding | 28272 | A28272T | A | T | 22 | 22 | B.1.617.2 | 0.000083 |
noncoding | 28272 | A28272T | A | T | 20 | 20 | B.1.595 | 0.005219 |
noncoding | 28272 | A28272C | A | C | 18 | 18 | AY.4 | 0.000028 |
noncoding | 28272 | A28272T | A | T | 18 | 18 | B.1.214.2 | 0.010791 |
noncoding | 28272 | A28272T | A | T | 17 | 17 | B.1.177 | 0.000224 |
noncoding | 28272 | A28272G | A | G | 17 | 17 | B.1.2 | 0.00015 |
noncoding | 28272 | A28272G | A | G | 16 | 16 | P.1 | 0.000252 |
noncoding | 28272 | A28272- | A | - | 15 | 15 | B.1.1.7 | 0.000013 |
noncoding | 28272 | A28272- | A | - | 15 | 15 | B.1.214.3 | 0.107143 |
noncoding | 28272 | A28272T | A | T | 14 | 14 | B.1.1.416 | 0.01267 |
noncoding | 28272 | A28272G | A | G | 13 | 13 | B.1.438.3 | 1 |
noncoding | 28272 | A28272T | A | T | 13 | 13 | B.1.575.1 | 0.031707 |
noncoding | 28272 | A28272T | A | T | 12 | 12 | B.1.1.232 | 0.021779 |
noncoding | 28272 | A28272T | A | T | 10 | 10 | A | 0.00387 |
noncoding | 28272 | A28272T | A | T | 10 | 10 | B.1.618 | 0.040323 |
noncoding | 28272 | A28272G | A | G | 9 | 9 | B.1.177 | 0.000119 |
noncoding | 28272 | A28272T | A | T | 9 | 9 | P.1 | 0.000142 |
noncoding | 28272 | A28272C | A | C | 9 | 9 | P.1.12 | 0.004356 |
noncoding | 28272 | A28272T | A | T | 8 | 8 | AY.46 | 0.000833 |
noncoding | 28272 | A28272T | A | T | 7 | 7 | B.1.1.192 | 0.016166 |
noncoding | 28272 | A28272G | A | G | 7 | 7 | B.1.1.306 | 0.003069 |
noncoding | 28272 | A28272G | A | G | 7 | 7 | B.1.1.33 | 0.002946 |
noncoding | 28272 | A28272G | A | G | 7 | 7 | B.1.1.416 | 0.006335 |
noncoding | 28272 | A28272T | A | T | 7 | 7 | B.1.177.72 | 0.023729 |
noncoding | 28272 | A28272T | A | T | 7 | 7 | B.1.351 | 0.000208 |
noncoding | 28272 | A28272T | A | T | 7 | 7 | B.1.526 | 0.000165 |
noncoding | 28272 | A28272T | A | T | 7 | 7 | B.1.561 | 0.002779 |
noncoding | 28272 | A28272C | A | C | 7 | 7 | P.1.17 | 0.001132 |
noncoding | 28272 | A28272T | A | T | 7 | 7 | P.1.17 | 0.001132 |
noncoding | 28272 | A28272T | A | T | 6 | 6 | B.1.1.222 | 0.001224 |
noncoding | 28272 | A28272T | A | T | 6 | 6 | B.1.157 | 0.01791 |
noncoding | 28272 | A28272T | A | T | 6 | 6 | P.1.12 | 0.002904 |
noncoding | 28272 | A28272T | A | T | 5 | 5 | B.1.1.294 | 0.006329 |
noncoding | 28272 | A28272T | A | T | 5 | 5 | B.1.1.335 | 0.064935 |
noncoding | 28272 | A28272G | A | G | 5 | 5 | B.1.1.7 | 0.000004 |
noncoding | 28272 | A28272G | A | G | 5 | 5 | B.1.221 | 0.000355 |
noncoding | 28272 | A28272G | A | G | 5 | 5 | B.1.311 | 0.001373 |
noncoding | 28272 | A28272- | A | - | 5 | 5 | B.1.324 | 0.008026 |
noncoding | 28272 | A28272G | A | G | 5 | 5 | B.1.351 | 0.000149 |
noncoding | 28272 | A28272T | A | T | 5 | 5 | B.1.36 | 0.00073 |
noncoding | 28272 | A28272T | A | T | 5 | 5 | B.1.628 | 0.001762 |
noncoding | 28272 | A28272T | A | T | 4 | 4 | AY.103 | 0.000025 |
noncoding | 28272 | A28272T | A | T | 4 | 4 | AY.44 | 0.000024 |
noncoding | 28272 | A28272- | A | - | 4 | 4 | B.1.214.1 | 0.08 |
noncoding | 28272 | A28272T | A | T | 4 | 4 | B.1.234 | 0.000528 |
noncoding | 28272 | A28272T | A | T | 4 | 4 | B.1.351.5 | 0.002398 |
noncoding | 28272 | A28272G | A | G | 4 | 4 | B.1.36 | 0.000584 |
noncoding | 28272 | A28272T | A | T | 4 | 4 | B.1.609 | 0.001918 |
noncoding | 28272 | A28272T | A | T | 3 | 3 | AY.100 | 0.000138 |
noncoding | 28272 | A28272T | A | T | 3 | 3 | AY.113 | 0.000427 |
noncoding | 28272 | A28272T | A | T | 3 | 3 | AY.25 | 0.000018 |
noncoding | 28272 | A28272T | A | T | 3 | 3 | AY.34 | 0.000291 |
noncoding | 28272 | A28272- | A | - | 3 | 3 | B.1 | 0.000027 |
noncoding | 28272 | A28272- | A | - | 3 | 3 | B.1.1 | 0.000054 |
noncoding | 28272 | A28272T | A | T | 3 | 3 | B.1.1.269 | 0.00406 |
noncoding | 28272 | A28272G | A | G | 3 | 3 | B.1.1.28 | 0.000934 |
noncoding | 28272 | A28272G | A | G | 3 | 3 | B.1.1.507 | 0.026087 |
noncoding | 28272 | A28272T | A | T | 3 | 3 | B.1.126 | 0.003827 |
noncoding | 28272 | A28272G | A | G | 3 | 3 | B.1.128 | 0.001906 |
noncoding | 28272 | A28272G | A | G | 3 | 3 | B.1.160 | 0.000094 |
noncoding | 28272 | A28272T | A | T | 3 | 3 | B.1.177.53 | 0.007177 |
noncoding | 28272 | A28272G | A | G | 3 | 3 | B.1.468 | 0.017143 |
noncoding | 28272 | A28272T | A | T | 3 | 3 | C.1 | 0.007177 |
noncoding | 28272 | A28272G | A | G | 3 | 3 | C.23 | 0.017442 |
noncoding | 28272 | A28272T | A | T | 3 | 3 | C.37 | 0.000348 |
noncoding | 28272 | A28272C | A | C | 3 | 3 | P.1.10 | 0.000808 |
noncoding | 28272 | A28272T | A | T | 2 | 2 | A.2 | 0.001324 |
noncoding | 28272 | A28272T | A | T | 2 | 2 | AY.102 | 0.000053 |
noncoding | 28272 | A28272T | A | T | 2 | 2 | AY.39 | 0.000049 |
noncoding | 28272 | A28272T | A | T | 2 | 2 | AY.61 | 0.00021 |
noncoding | 28272 | A28272T | A | T | 2 | 2 | AY.68 | 0.000547 |
noncoding | 28272 | A28272T | A | T | 2 | 2 | AY.92 | 0.000575 |
noncoding | 28272 | A28272G | A | G | 2 | 2 | AZ.2 | 0.001642 |
noncoding | 28272 | A28272G | A | G | 2 | 2 | B | 0.000256 |
noncoding | 28272 | A28272G | A | G | 2 | 2 | B.1.1.200 | 0.014925 |
noncoding | 28272 | A28272T | A | T | 2 | 2 | B.1.1.229 | 0.011494 |
noncoding | 28272 | A28272G | A | G | 2 | 2 | B.1.1.232 | 0.00363 |
noncoding | 28272 | A28272G | A | G | 2 | 2 | B.1.1.294 | 0.002532 |
noncoding | 28272 | A28272T | A | T | 2 | 2 | B.1.1.432 | 0.002532 |
noncoding | 28272 | A28272T | A | T | 2 | 2 | B.1.1.507 | 0.017391 |
noncoding | 28272 | A28272G | A | G | 2 | 2 | B.1.1.519 | 0.000079 |
noncoding | 28272 | A28272T | A | T | 2 | 2 | B.1.1.519 | 0.000079 |
noncoding | 28272 | A28272G | A | G | 2 | 2 | B.1.160.28 | 0.005848 |
noncoding | 28272 | A28272T | A | T | 2 | 2 | B.1.177.44 | 0.001038 |
noncoding | 28272 | A28272T | A | T | 2 | 2 | B.1.221 | 0.000142 |
noncoding | 28272 | A28272T | A | T | 2 | 2 | B.1.243 | 0.000139 |
noncoding | 28272 | A28272G | A | G | 2 | 2 | B.1.258 | 0.000133 |
noncoding | 28272 | A28272T | A | T | 2 | 2 | B.1.281 | 0.043478 |
noncoding | 28272 | A28272T | A | T | 2 | 2 | B.1.36.17 | 0.000988 |
noncoding | 28272 | A28272G | A | G | 2 | 2 | B.1.367 | 0.001585 |
noncoding | 28272 | A28272T | A | T | 2 | 2 | B.1.369 | 0.00057 |
noncoding | 28272 | A28272T | A | T | 2 | 2 | B.1.375 | 0.001639 |
noncoding | 28272 | A28272G | A | G | 2 | 2 | B.1.561 | 0.000794 |
noncoding | 28272 | A28272T | A | T | 2 | 2 | B.1.580 | 0.00813 |
noncoding | 28272 | A28272G | A | G | 2 | 2 | B.1.617.1 | 0.000258 |
noncoding | 28272 | A28272- | A | - | 2 | 2 | B.1.617.2 | 0.000008 |
noncoding | 28272 | A28272T | A | T | 2 | 2 | B.1.637 | 0.000146 |
noncoding | 28272 | A28272G | A | G | 2 | 2 | B.1.638 | 0.105263 |
noncoding | 28272 | A28272G | A | G | 2 | 2 | B.29 | 0.007018 |
noncoding | 28272 | A28272T | A | T | 2 | 2 | P.1.1 | 0.000635 |
noncoding | 28272 | A28272G | A | G | 2 | 2 | P.1.12 | 0.000968 |
noncoding | 28272 | A28272C | A | C | 2 | 2 | P.1.15 | 0.000465 |
noncoding | 28272 | A28272T | A | T | 2 | 2 | P.1.15 | 0.000465 |
noncoding | 28272 | A28272T | A | T | 2 | 2 | P.1.7 | 0.000639 |
noncoding | 28272 | A28272G | A | G | 1 | 1 | A | 0.000387 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | A.2.4 | 0.003367 |
noncoding | 28272 | A28272- | A | - | 1 | 1 | A.23.1 | 0.000704 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | AE.8 | 0.000489 |
noncoding | 28272 | A28272G | A | G | 1 | 1 | AY.103 | 0.000006 |
noncoding | 28272 | A28272C | A | C | 1 | 1 | AY.103 | 0.000006 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | AY.110 | 0.000113 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | AY.16.1 | 0.00047 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | AY.2 | 0.000356 |
noncoding | 28272 | A28272G | A | G | 1 | 1 | AY.4 | 0.000002 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | AY.4.2 | 0.000022 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | AY.42 | 0.00004 |
noncoding | 28272 | A28272- | A | - | 1 | 1 | AY.44 | 0.000006 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | AY.45 | 0.000122 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | AY.59 | 0.00053 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | AY.71 | 0.000475 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | AY.96 | 0.002075 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | AY.98.1 | 0.000048 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.1.1 | 0.000327 |
noncoding | 28272 | A28272G | A | G | 1 | 1 | B.1.1.141 | 0.002012 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.1.186 | 0.003436 |
noncoding | 28272 | A28272- | A | - | 1 | 1 | B.1.1.189 | 0.001513 |
noncoding | 28272 | A28272G | A | G | 1 | 1 | B.1.1.192 | 0.002309 |
noncoding | 28272 | A28272G | A | G | 1 | 1 | B.1.1.214 | 0.000055 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.1.216 | 0.00089 |
noncoding | 28272 | A28272- | A | - | 1 | 1 | B.1.1.232 | 0.001815 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.1.236 | 0.006897 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.1.241 | 0.00207 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.1.273 | 0.006757 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.1.28 | 0.000311 |
noncoding | 28272 | A28272C | A | C | 1 | 1 | B.1.1.294 | 0.001266 |
noncoding | 28272 | A28272G | A | G | 1 | 1 | B.1.1.37 | 0.000193 |
noncoding | 28272 | A28272- | A | - | 1 | 1 | B.1.1.397 | 0.002252 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.1.44 | 0.00241 |
noncoding | 28272 | A28272- | A | - | 1 | 1 | B.1.1.448 | 0.002033 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.1.459 | 0.015385 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.1.464 | 0.001473 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.1.53 | 0.013699 |
noncoding | 28272 | A28272G | A | G | 1 | 1 | B.1.1.63 | 0.000386 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.110.3 | 0.000718 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.119 | 0.010526 |
noncoding | 28272 | A28272G | A | G | 1 | 1 | B.1.157 | 0.002985 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.160 | 0.000031 |
noncoding | 28272 | A28272G | A | G | 1 | 1 | B.1.160.32 | 0.004292 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.177.31 | 0.011494 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.177.60 | 0.000218 |
noncoding | 28272 | A28272G | A | G | 1 | 1 | B.1.177.63 | 0.002703 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.177.7 | 0.000165 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.177.73 | 0.000566 |
noncoding | 28272 | A28272G | A | G | 1 | 1 | B.1.177.77 | 0.000726 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.214 | 0.003663 |
noncoding | 28272 | A28272- | A | - | 1 | 1 | B.1.214 | 0.003663 |
noncoding | 28272 | A28272G | A | G | 1 | 1 | B.1.214.2 | 0.0006 |
noncoding | 28272 | A28272- | A | - | 1 | 1 | B.1.214.4 | 0.009091 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.232 | 0.000537 |
noncoding | 28272 | A28272C | A | C | 1 | 1 | B.1.234 | 0.000132 |
noncoding | 28272 | A28272G | A | G | 1 | 1 | B.1.237 | 0.004975 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.237 | 0.004975 |
noncoding | 28272 | A28272G | A | G | 1 | 1 | B.1.241 | 0.000812 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.258 | 0.000067 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.258.11 | 0.000396 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.258.3 | 0.001675 |
noncoding | 28272 | A28272- | A | - | 1 | 1 | B.1.351 | 0.00003 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.354 | 0.043478 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.36.10 | 0.004785 |
noncoding | 28272 | A28272G | A | G | 1 | 1 | B.1.36.29 | 0.000517 |
noncoding | 28272 | A28272G | A | G | 1 | 1 | B.1.36.38 | 0.001642 |
noncoding | 28272 | A28272G | A | G | 1 | 1 | B.1.369 | 0.000285 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.399 | 0.001934 |
noncoding | 28272 | A28272G | A | G | 1 | 1 | B.1.409 | 0.000781 |
noncoding | 28272 | A28272G | A | G | 1 | 1 | B.1.439 | 0.005917 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.441 | 0.009615 |
noncoding | 28272 | A28272G | A | G | 1 | 1 | B.1.456 | 0.003268 |
noncoding | 28272 | A28272G | A | G | 1 | 1 | B.1.469 | 0.00361 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.506 | 0.02381 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.517 | 0.000427 |
noncoding | 28272 | A28272- | A | - | 1 | 1 | B.1.525 | 0.000113 |
noncoding | 28272 | A28272G | A | G | 1 | 1 | B.1.533 | 0.009615 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.551 | 0.00129 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.564 | 0.000426 |
noncoding | 28272 | A28272G | A | G | 1 | 1 | B.1.567 | 0.003333 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.575 | 0.000303 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.576 | 0.000907 |
noncoding | 28272 | A28272G | A | G | 1 | 1 | B.1.577 | 0.000687 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.582 | 0.000491 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.588 | 0.00091 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.599 | 0.00365 |
noncoding | 28272 | A28272- | A | - | 1 | 1 | B.1.609 | 0.000479 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.612 | 0.002653 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.617.1 | 0.000129 |
noncoding | 28272 | A28272C | A | C | 1 | 1 | B.1.617.2 | 0.000004 |
noncoding | 28272 | A28272G | A | G | 1 | 1 | B.1.618 | 0.004032 |
noncoding | 28272 | A28272G | A | G | 1 | 1 | B.1.620 | 0.000946 |
noncoding | 28272 | A28272- | A | - | 1 | 1 | B.1.625 | 0.002353 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.638 | 0.052632 |
noncoding | 28272 | A28272G | A | G | 1 | 1 | B.1.9.4 | 0.006135 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.1.94 | 0.027027 |
noncoding | 28272 | A28272G | A | G | 1 | 1 | B.28 | 0.003279 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.3 | 0.000831 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.4 | 0.002208 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.4.1 | 0.018868 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.55 | 0.00295 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | B.57 | 0.015152 |
noncoding | 28272 | A28272G | A | G | 1 | 1 | C.33 | 0.058824 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | C.37.1 | 0.002618 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | N.5 | 0.001767 |
noncoding | 28272 | A28272G | A | G | 1 | 1 | N.6 | 0.007092 |
noncoding | 28272 | A28272- | A | - | 1 | 1 | P.1 | 0.000016 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | P.1.10 | 0.000269 |
noncoding | 28272 | A28272G | A | G | 1 | 1 | P.1.17 | 0.000162 |
noncoding | 28272 | A28272T | A | T | 1 | 1 | Y.1 | 0.012821 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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