CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = noncoding : CodonNum = 27890

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
noncoding27890G27890TnoncodingGT4341043410127890-27890
noncoding27890G27890-noncodingG-73817381127890-27890
noncoding27890G27890AnoncodingGA591591127890-27890
noncoding27890G27890CnoncodingGC7878127890-27890
noncoding27890G27890DnoncodingGD11127890-27890

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
noncoding27890G27890TGT4341043410All0.008303
noncoding27890G27890TGT4172441724B.1.4290.981718
noncoding27890G27890-G-73817381All0.001412
noncoding27890G27890-G-31073107B.1.1.3180.937538
noncoding27890G27890-G-11611161AZ.20.953202
noncoding27890G27890-G-11531153AZ.11
noncoding27890G27890-G-618618AZ.30.93921
noncoding27890G27890AGA591591All0.000113
noncoding27890G27890TGT451451B.10.004131
noncoding27890G27890TGT416416B.1.4270.021007
noncoding27890G27890AGA319319B.1.10.005787
noncoding27890G27890-G-274274AZ.40.919463
noncoding27890G27890-G-231231AZ.50.810526
noncoding27890G27890-G-154154B.1.1.2220.031416
noncoding27890G27890-G-110110AZ.2.10.894309
noncoding27890G27890-G-9797AY.40.000151
noncoding27890G27890-G-9393AZ.60.781513
noncoding27890G27890TGT8383B.1.429.11
noncoding27890G27890CGC7878All0.000015
noncoding27890G27890AGA7777B.1.1.70.000069
noncoding27890G27890TGT7070B.1.10.00127
noncoding27890G27890TGT5656B.1.1.70.00005
noncoding27890G27890-G-5656B.1.1.70.00005
noncoding27890G27890-G-4848B.1.2430.00334
noncoding27890G27890TGT4646AY.40.000072
noncoding27890G27890TGT4646B.1.20.000405
noncoding27890G27890TGT3838B.1.1.2200.070632
noncoding27890G27890-G-3737AY.290.000584
noncoding27890G27890TGT3535B.1.2390.042735
noncoding27890G27890TGT3535P.10.000551
noncoding27890G27890TGT3434B.1.1260.043367
noncoding27890G27890-G-3030B.1.10.000544
noncoding27890G27890AGA2727B.1.617.10.003482
noncoding27890G27890TGT2424B.1.5950.006263
noncoding27890G27890TGT2424B.1.5960.002091
noncoding27890G27890AGA2323B.1.1.10.007514
noncoding27890G27890TGT2020B.1.1.630.007716
noncoding27890G27890TGT1919B.1.2430.001322
noncoding27890G27890AGA1818B.10.000165
noncoding27890G27890-G-1717B0.002173
noncoding27890G27890TGT1717B.1.3110.004668
noncoding27890G27890AGA1616B.1.2210.001137
noncoding27890G27890TGT1515B.1.1.2220.00306
noncoding27890G27890TGT1515B.1.6180.060484
noncoding27890G27890TGT1313B.1.1.3970.029279
noncoding27890G27890AGA1313B.1.20.000114
noncoding27890G27890-G-1313B.1.20.000114
noncoding27890G27890-G-1212B.10.00011
noncoding27890G27890CGC1111B.1.177.810.002083
noncoding27890G27890TGT1010AY.250.00006
noncoding27890G27890TGT1010B.1.177.460.009183
noncoding27890G27890TGT1010B.1.2580.000665
noncoding27890G27890-G-99AY.1030.000056
noncoding27890G27890-G-99B.1.617.20.000034
noncoding27890G27890TGT88AY.430.000035
noncoding27890G27890TGT88AY.440.000049
noncoding27890G27890TGT88B0.001022
noncoding27890G27890AGA77B.1.1.2250.05036
noncoding27890G27890TGT77B.1.3670.005547
noncoding27890G27890TGT77B.1.617.20.000026
noncoding27890G27890AGA66AU.20.014528
noncoding27890G27890AGA66AY.1210.000812
noncoding27890G27890-G-66AY.29.10.001323
noncoding27890G27890-G-66AY.30.00006
noncoding27890G27890AGA66AY.40.000009
noncoding27890G27890-G-66AY.430.000027
noncoding27890G27890CGC66AY.99.20.000553
noncoding27890G27890-G-66B.1.1.2650.018927
noncoding27890G27890TGT66B.1.1770.000079
noncoding27890G27890-G-66B.1.243.20.086957
noncoding27890G27890CGC66B.1.360.000875
noncoding27890G27890TGT66B.1.5610.002382
noncoding27890G27890AGA66B.1.6280.002114
noncoding27890G27890-G-66P.10.000095
noncoding27890G27890CGC66P.10.000095
noncoding27890G27890-G-55AY.440.00003
noncoding27890G27890TGT55B.1.1.5190.000199
noncoding27890G27890-G-55B.1.1.5190.000199
noncoding27890G27890TGT55B.1.1570.014925
noncoding27890G27890TGT55B.1.177.730.002831
noncoding27890G27890CGC55B.1.20.000044
noncoding27890G27890AGA55B.1.360.00073
noncoding27890G27890-G-55B.1.5260.000118
noncoding27890G27890TGT55B.1.6090.002397
noncoding27890G27890CGC55B.1.617.20.000019
noncoding27890G27890TGT55B.1.6230.002682
noncoding27890G27890CGC55P.1.140.000239
noncoding27890G27890-G-440.222222
noncoding27890G27890-G-44AT.10.020513
noncoding27890G27890TGT44AY.1180.000251
noncoding27890G27890-G-44AY.250.000024
noncoding27890G27890TGT44B.1.1.3180.001207
noncoding27890G27890CGC44B.1.177.570.001124
noncoding27890G27890TGT44B.1.3690.001141
noncoding27890G27890AGA44B.1.617.20.000015
noncoding27890G27890TGT44B.1.621.10.002023
noncoding27890G27890AGA44P.10.000063
noncoding27890G27890TGT33A.2.50.001497
noncoding27890G27890-G-33AY.200.000117
noncoding27890G27890CGC33AY.340.000291
noncoding27890G27890-G-33AY.370.000948
noncoding27890G27890CGC33AY.40.000005
noncoding27890G27890AGA33B.1.1.1330.025424
noncoding27890G27890TGT33B.1.1.1570.00274
noncoding27890G27890CGC33B.1.1.70.000003
noncoding27890G27890-G-33B.1.1260.003827
noncoding27890G27890AGA33B.1.243.20.043478
noncoding27890G27890TGT33B.1.360.000438
noncoding27890G27890AGA33B.1.5090.002597
noncoding27890G27890TGT33C.360.002732
noncoding27890G27890-G-33P.1.150.000697
noncoding27890G27890TGT220.111111
noncoding27890G27890AGA220.111111
noncoding27890G27890TGT22A0.000774
noncoding27890G27890-G-22A.2.20.003378
noncoding27890G27890-G-22AD.20.000438
noncoding27890G27890TGT22AY.1020.000053
noncoding27890G27890-G-22AY.1180.000125
noncoding27890G27890AGA22AY.230.000139
noncoding27890G27890TGT22AY.260.000057
noncoding27890G27890TGT22AY.30.00002
noncoding27890G27890TGT22AY.300.000791
noncoding27890G27890TGT22AY.390.000049
noncoding27890G27890TGT22AY.4.20.000043
noncoding27890G27890CGC22AY.440.000012
noncoding27890G27890TGT22AY.470.000062
noncoding27890G27890-G-22AY.470.000062
noncoding27890G27890-G-22AY.480.00093
noncoding27890G27890TGT22AY.50.000041
noncoding27890G27890TGT22AY.9.20.000073
noncoding27890G27890AGA22B.1.1.1610.007067
noncoding27890G27890AGA22B.1.1.1740.006757
noncoding27890G27890TGT22B.1.1.2140.000111
noncoding27890G27890-G-22B.1.1.2140.000111
noncoding27890G27890TGT22B.1.1.2290.011494
noncoding27890G27890TGT22B.1.1.2650.006309
noncoding27890G27890TGT22B.1.1.2730.013514
noncoding27890G27890TGT22B.1.1.280.000622
noncoding27890G27890-G-22B.1.1.3060.000877
noncoding27890G27890AGA22B.1.1.3260.003521
noncoding27890G27890AGA22B.1.1.460.008734
noncoding27890G27890AGA22B.1.1770.000026
noncoding27890G27890TGT22B.1.2060.001631
noncoding27890G27890TGT22B.1.2140.007326
noncoding27890G27890TGT22B.1.2340.000264
noncoding27890G27890TGT22B.1.3510.000059
noncoding27890G27890-G-22B.1.3510.000059
noncoding27890G27890TGT22B.1.3660.009756
noncoding27890G27890-G-22B.1.4270.000101
noncoding27890G27890-G-22B.1.4290.000047
noncoding27890G27890TGT22B.1.5260.000047
noncoding27890G27890AGA22B.1.5260.000047
noncoding27890G27890-G-22B.1.5680.002222
noncoding27890G27890TGT22B.1.575.10.004878
noncoding27890G27890-G-22B.1.5760.001813
noncoding27890G27890-G-22B.1.6210.000177
noncoding27890G27890TGT22P.1.100.000539
noncoding27890G27890-G-22P.1.120.000968
noncoding27890G27890-G-22P.1.170.000324
noncoding27890G27890TGT22P.1.170.000324
noncoding27890G27890AGA11A0.000387
noncoding27890G27890-G-11A.10.000282
noncoding27890G27890-G-11A.2.50.000499
noncoding27890G27890-G-11A.23.10.000704
noncoding27890G27890DGD11All0
noncoding27890G27890TGT11AY.1000.000046
noncoding27890G27890-G-11AY.1000.000046
noncoding27890G27890CGC11AY.1040.001984
noncoding27890G27890-G-11AY.1080.001103
noncoding27890G27890-G-11AY.1170.000085
noncoding27890G27890AGA11AY.1190.000035
noncoding27890G27890-G-11AY.1200.000037
noncoding27890G27890-G-11AY.1210.000135
noncoding27890G27890TGT11AY.1210.000135
noncoding27890G27890TGT11AY.130.000161
noncoding27890G27890AGA11AY.160.00038
noncoding27890G27890TGT11AY.16.10.00047
noncoding27890G27890-G-11AY.190.00114
noncoding27890G27890CGC11AY.200.000039
noncoding27890G27890-G-11AY.230.00007
noncoding27890G27890TGT11AY.230.00007
noncoding27890G27890-G-11AY.260.000028
noncoding27890G27890AGA11AY.260.000028
noncoding27890G27890CGC11AY.290.000016
noncoding27890G27890-G-11AY.360.000148
noncoding27890G27890AGA11AY.390.000025
noncoding27890G27890-G-11AY.390.000025
noncoding27890G27890-G-11AY.4.20.000022
noncoding27890G27890-G-11AY.4.50.000107
noncoding27890G27890DGD11AY.430.000004
noncoding27890G27890CGC11AY.46.20.000635
noncoding27890G27890AGA11AY.470.000031
noncoding27890G27890CGC11AY.470.000031
noncoding27890G27890-G-11AY.550.000917
noncoding27890G27890TGT11AY.610.000105
noncoding27890G27890-G-11AY.610.000105
noncoding27890G27890TGT11AY.650.000533
noncoding27890G27890CGC11AY.650.000533
noncoding27890G27890-G-11AY.670.000464
noncoding27890G27890TGT11AY.710.000475
noncoding27890G27890-G-11AY.740.000116
noncoding27890G27890TGT11AY.750.000056
noncoding27890G27890-G-11AY.750.000056
noncoding27890G27890CGC11AY.75.10.00018
noncoding27890G27890CGC11AY.840.000437
noncoding27890G27890TGT11AY.880.000884
noncoding27890G27890TGT11AY.9.10.000084
noncoding27890G27890TGT11AY.950.000761
noncoding27890G27890CGC11AY.98.10.000048
noncoding27890G27890-G-11AY.990.001049
noncoding27890G27890-G-11AY.99.10.001553
noncoding27890G27890CGC11B.10.000009
noncoding27890G27890CGC11B.1.10.000018
noncoding27890G27890TGT11B.1.1.100.001115
noncoding27890G27890AGA11B.1.1.100.001115
noncoding27890G27890TGT11B.1.1.1450.037037
noncoding27890G27890AGA11B.1.1.1710.003676
noncoding27890G27890-G-11B.1.1.2160.00089
noncoding27890G27890TGT11B.1.1.2310.003096
noncoding27890G27890AGA11B.1.1.2410.00207
noncoding27890G27890TGT11B.1.1.250.000569
noncoding27890G27890TGT11B.1.1.2690.001353
noncoding27890G27890AGA11B.1.1.2770.000759
noncoding27890G27890CGC11B.1.1.2770.000759
noncoding27890G27890TGT11B.1.1.2820.011628
noncoding27890G27890-G-11B.1.1.2840.000107
noncoding27890G27890TGT11B.1.1.2850.006536
noncoding27890G27890TGT11B.1.1.3040.002809
noncoding27890G27890-G-11B.1.1.3540.004386
noncoding27890G27890TGT11B.1.1.3680.003086
noncoding27890G27890TGT11B.1.1.3690.000446
noncoding27890G27890-G-11B.1.1.370.000193
noncoding27890G27890AGA11B.1.1.3740.002375
noncoding27890G27890AGA11B.1.1.390.00051
noncoding27890G27890AGA11B.1.1.4090.002833
noncoding27890G27890AGA11B.1.1.4320.001266
noncoding27890G27890-G-11B.1.1.440.00241
noncoding27890G27890AGA11B.1.1.450.014085
noncoding27890G27890-G-11B.1.1.4640.001473
noncoding27890G27890AGA11B.1.1.5190.00004
noncoding27890G27890AGA11B.1.1.5230.001563
noncoding27890G27890-G-11B.1.1.5250.005464
noncoding27890G27890AGA11B.1.1.5280.004808
noncoding27890G27890TGT11B.1.1600.000031
noncoding27890G27890-G-11B.1.1600.000031
noncoding27890G27890-G-11B.1.1770.000013
noncoding27890G27890CGC11B.1.1770.000013
noncoding27890G27890-G-11B.1.177.540.000606
noncoding27890G27890AGA11B.1.177.600.000218
noncoding27890G27890-G-11B.1.177.630.002703
noncoding27890G27890-G-11B.1.177.70.000165
noncoding27890G27890TGT11B.1.177.810.000189
noncoding27890G27890-G-11B.1.177.830.001481
noncoding27890G27890-G-11B.1.1950.005025
noncoding27890G27890TGT11B.1.2210.000071
noncoding27890G27890CGC11B.1.2210.000071
noncoding27890G27890AGA11B.1.2340.000132
noncoding27890G27890-G-11B.1.2580.000067
noncoding27890G27890TGT11B.1.258.30.001675
noncoding27890G27890TGT11B.1.2810.021739
noncoding27890G27890TGT11B.1.3240.001605
noncoding27890G27890CGC11B.1.3510.00003
noncoding27890G27890TGT11B.1.3540.043478
noncoding27890G27890AGA11B.1.36.160.001425
noncoding27890G27890-G-11B.1.3690.000285
noncoding27890G27890TGT11B.1.3750.00082
noncoding27890G27890TGT11B.1.4000.000429
noncoding27890G27890CGC11B.1.4290.000024
noncoding27890G27890TGT11B.1.4410.009615
noncoding27890G27890CGC11B.1.4680.005714
noncoding27890G27890-G-11B.1.4700.001404
noncoding27890G27890TGT11B.1.4970.000315
noncoding27890G27890AGA11B.1.4970.000315
noncoding27890G27890TGT11B.1.5030.002488
noncoding27890G27890AGA11B.1.5240.001406
noncoding27890G27890CGC11B.1.5330.009615
noncoding27890G27890TGT11B.1.5370.02
noncoding27890G27890AGA11B.1.5510.00129
noncoding27890G27890TGT11B.1.5740.002151
noncoding27890G27890AGA11B.1.5750.000303
noncoding27890G27890TGT11B.1.5760.000907
noncoding27890G27890TGT11B.1.5800.004065
noncoding27890G27890-G-11B.1.5820.000491
noncoding27890G27890-G-11B.1.5960.000087
noncoding27890G27890TGT11B.1.6210.000089
noncoding27890G27890-G-11B.1.6300.005236
noncoding27890G27890TGT11B.1.6330.041667
noncoding27890G27890TGT11B.30.000831
noncoding27890G27890AGA11B.40.002208
noncoding27890G27890TGT11B.4.10.018868
noncoding27890G27890AGA11C.230.005814
noncoding27890G27890-G-11C.260.007353
noncoding27890G27890-G-11C.370.000116
noncoding27890G27890TGT11P.1.10.000318
noncoding27890G27890-G-11P.1.10.000318
noncoding27890G27890-G-11P.1.140.000048
noncoding27890G27890AGA11P.1.140.000048
noncoding27890G27890AGA11P.1.20.001156
noncoding27890G27890CGC11P.1.20.001156
noncoding27890G27890TGT11P.1.70.000319
noncoding27890G27890TGT11P.20.000187
noncoding27890G27890-G-11R.10.00009
noncoding27890G27890TGT11R.10.00009