CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = noncoding : CodonNum = 27393

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
noncoding27393C27393TnoncodingCT1536115361127393-27393
noncoding27393C27393-noncodingC-995995127393-27393
noncoding27393C27393AnoncodingCA4040127393-27393
noncoding27393C27393GnoncodingCG88127393-27393
noncoding27393C27393BnoncodingCB22127393-27393
noncoding27393C27393KnoncodingCK22127393-27393

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
noncoding27393C27393TCT1536115361All0.002938
noncoding27393C27393TCT38513851AY.7.10.434013
noncoding27393C27393TCT27022702B.1.1.70.002419
noncoding27393C27393TCT20102010AY.200.078119
noncoding27393C27393TCT12411241AY.40.001932
noncoding27393C27393-C-995995All0.00019
noncoding27393C27393TCT724724B.1.617.20.002726
noncoding27393C27393TCT639639AY.430.002831
noncoding27393C27393TCT451451B.1.5260.010601
noncoding27393C27393-C-418418B.1.1.70.000374
noncoding27393C27393TCT321321AY.250.001931
noncoding27393C27393TCT316316AY.1030.001962
noncoding27393C27393TCT196196AY.9.20.007199
noncoding27393C27393TCT185185AY.440.001126
noncoding27393C27393TCT185185P.10.002914
noncoding27393C27393-C-161161AY.40.000251
noncoding27393C27393TCT145145AY.50.002994
noncoding27393C27393TCT134134AY.1020.003553
noncoding27393C27393TCT105105AY.390.002595
noncoding27393C27393TCT9191B.1.20.000801
noncoding27393C27393TCT8787AY.460.009055
noncoding27393C27393TCT8585AY.30.000845
noncoding27393C27393TCT8383B.1.4290.001953
noncoding27393C27393TCT7575AY.98.10.003632
noncoding27393C27393TCT6767AY.1000.003082
noncoding27393C27393TCT6565B.10.000595
noncoding27393C27393TCT5656B.1.3510.001665
noncoding27393C27393TCT5151B.1.1770.000672
noncoding27393C27393TCT4848AY.1200.001785
noncoding27393C27393TCT4545AY.9.10.003768
noncoding27393C27393TCT4242B.1.5250.004753
noncoding27393C27393ACA4040All0.000008
noncoding27393C27393TCT3636B.1.10.000653
noncoding27393C27393TCT3535AY.740.004048
noncoding27393C27393TCT3434B.1.1600.00106
noncoding27393C27393-C-3333B.1.617.20.000124
noncoding27393C27393TCT3131AY.470.000964
noncoding27393C27393TCT3030AY.290.000473
noncoding27393C27393TCT2929AY.160.01101
noncoding27393C27393-C-2828AY.440.00017
noncoding27393C27393TCT2727AY.1170.002282
noncoding27393C27393TCT2727B.1.2210.001918
noncoding27393C27393TCT2727P.1.10.008577
noncoding27393C27393-C-2626AY.1200.000967
noncoding27393C27393TCT2626AY.230.001813
noncoding27393C27393TCT2525AY.260.000708
noncoding27393C27393-C-2525AY.30.000249
noncoding27393C27393TCT2323AY.330.001536
noncoding27393C27393-C-2222AY.250.000132
noncoding27393C27393TCT2222AY.4.20.000477
noncoding27393C27393TCT2222AY.750.001232
noncoding27393C27393TCT2121AY.420.000845
noncoding27393C27393TCT2121AY.620.00915
noncoding27393C27393TCT2121AY.830.036207
noncoding27393C27393TCT2020AY.1190.000706
noncoding27393C27393TCT2020B.1.1.2140.001109
noncoding27393C27393TCT2020B.1.1.5190.000794
noncoding27393C27393TCT1919AY.1130.002705
noncoding27393C27393TCT1818AY.1060.006028
noncoding27393C27393TCT1818AY.60.00074
noncoding27393C27393TCT1818AY.70.003528
noncoding27393C27393TCT1818B.1.5170.007686
noncoding27393C27393-C-1818P.10.000284
noncoding27393C27393TCT1717B.1.5960.001481
noncoding27393C27393TCT1616AY.980.001264
noncoding27393C27393TCT1616B.1.177.600.003495
noncoding27393C27393TCT1515AY.1090.011095
noncoding27393C27393TCT1515AY.900.010267
noncoding27393C27393TCT1515C.370.001741
noncoding27393C27393TCT1414AY.360.002075
noncoding27393C27393-C-1414AY.430.000062
noncoding27393C27393TCT1414AY.450.001704
noncoding27393C27393TCT1414Q.10.001769
noncoding27393C27393-C-1313AY.1030.000081
noncoding27393C27393TCT1313AY.1180.000814
noncoding27393C27393TCT1313AY.39.10.000515
noncoding27393C27393TCT1212AY.46.60.000866
noncoding27393C27393-C-1212B.1.4080.04428
noncoding27393C27393-C-1212C.370.001393
noncoding27393C27393-C-1111AY.240.004741
noncoding27393C27393-C-1111AY.390.000272
noncoding27393C27393TCT1111B.1.177.120.001669
noncoding27393C27393TCT1111B.1.770.5
noncoding27393C27393TCT1010AY.340.00097
noncoding27393C27393ACA1010AY.40.000016
noncoding27393C27393TCT1010B.1.2340.001319
noncoding27393C27393TCT1010B.1.4270.000505
noncoding27393C27393-C-1010B.1.5260.000235
noncoding27393C27393TCT99B.1.177.210.000688
noncoding27393C27393TCT99B.1.2580.000599
noncoding27393C27393GCG88All0.000002
noncoding27393C27393TCT88AY.1210.001083
noncoding27393C27393TCT88AY.270.000518
noncoding27393C27393-C-88AY.290.000126
noncoding27393C27393TCT88AY.700.001668
noncoding27393C27393TCT88AY.90.000541
noncoding27393C27393TCT88AY.99.20.000737
noncoding27393C27393TCT88C.160.008484
noncoding27393C27393TCT88P.1.40.007812
noncoding27393C27393TCT77AC.10.259259
noncoding27393C27393TCT77AY.1160.002007
noncoding27393C27393TCT77AY.320.003727
noncoding27393C27393TCT77AY.4.30.005892
noncoding27393C27393-C-77AY.770.007892
noncoding27393C27393TCT77AY.940.003099
noncoding27393C27393-C-77B.1.1.2140.000388
noncoding27393C27393TCT77B.1.617.10.000903
noncoding27393C27393TCT77B.1.6210.00062
noncoding27393C27393TCT77P.1.120.003388
noncoding27393C27393TCT66AY.140.000528
noncoding27393C27393TCT66AY.350.001398
noncoding27393C27393TCT66AY.370.001896
noncoding27393C27393TCT66AY.410.001764
noncoding27393C27393TCT66AY.46.40.000987
noncoding27393C27393TCT66AY.5.40.00166
noncoding27393C27393TCT66AY.610.000629
noncoding27393C27393TCT66B.1.1.2220.001224
noncoding27393C27393-C-66B.1.1.2840.000644
noncoding27393C27393TCT66B.1.177.860.001101
noncoding27393C27393-C-66B.1.20.000053
noncoding27393C27393TCT66B.1.2430.000418
noncoding27393C27393TCT66D.20.00045
noncoding27393C27393TCT66Q.80.000989
noncoding27393C27393TCT55AY.3.10.000426
noncoding27393C27393-C-55AY.470.000156
noncoding27393C27393TCT55AY.75.10.000902
noncoding27393C27393-C-55B.10.000046
noncoding27393C27393TCT55B.1.1.2630.007788
noncoding27393C27393TCT55B.1.1.3060.002192
noncoding27393C27393ACA55B.1.6200.00473
noncoding27393C27393TCT55B.1.6370.000365
noncoding27393C27393-C-44AY.1000.000184
noncoding27393C27393TCT44AY.1080.00441
noncoding27393C27393TCT44AY.120.001264
noncoding27393C27393TCT44AY.4.40.001637
noncoding27393C27393-C-44AY.4.50.00043
noncoding27393C27393-C-44AY.46.30.003735
noncoding27393C27393TCT44AY.840.00175
noncoding27393C27393-C-44B.1.10.000073
noncoding27393C27393ACA44B.1.177.210.000306
noncoding27393C27393TCT44B.1.36.170.001976
noncoding27393C27393TCT44B.1.4430.018692
noncoding27393C27393TCT44B.1.5610.001588
noncoding27393C27393-C-44B.1.6370.000292
noncoding27393C27393TCT44C.36.30.002269
noncoding27393C27393TCT44P.1.140.000191
noncoding27393C27393TCT44P.1.60.007782
noncoding27393C27393TCT33A0.001161
noncoding27393C27393TCT33AU.20.007264
noncoding27393C27393ACA33AY.1030.000019
noncoding27393C27393-C-33AY.4.20.000065
noncoding27393C27393TCT33AY.4.50.000322
noncoding27393C27393-C-33AY.420.000121
noncoding27393C27393-C-33AY.60.000123
noncoding27393C27393-C-33AY.660.003209
noncoding27393C27393-C-33AY.70.000588
noncoding27393C27393-C-33AY.7.20.001678
noncoding27393C27393TCT33AY.790.003632
noncoding27393C27393TCT33AY.820.004071
noncoding27393C27393-C-33AY.980.000237
noncoding27393C27393TCT33B.1.1.10.00098
noncoding27393C27393TCT33B.1.1.3110.001074
noncoding27393C27393TCT33B.1.1.500.002037
noncoding27393C27393TCT33B.1.1.630.001157
noncoding27393C27393-C-33B.1.1390.002199
noncoding27393C27393-C-33B.1.177.210.000229
noncoding27393C27393TCT33B.1.177.580.003995
noncoding27393C27393TCT33B.1.220.003953
noncoding27393C27393-C-33B.1.2340.000396
noncoding27393C27393TCT33B.1.2400.000647
noncoding27393C27393TCT33B.1.2470.044776
noncoding27393C27393TCT33B.1.258.170.000312
noncoding27393C27393TCT33B.1.3110.000824
noncoding27393C27393TCT33B.1.3200.003736
noncoding27393C27393-C-33B.1.360.000438
noncoding27393C27393TCT33B.1.360.000438
noncoding27393C27393-C-33B.1.36.10.003421
noncoding27393C27393TCT33B.1.36.310.005254
noncoding27393C27393TCT33B.1.438.10.000322
noncoding27393C27393TCT33B.1.4700.004213
noncoding27393C27393TCT33B.1.5950.000783
noncoding27393C27393TCT33P.20.00056
noncoding27393C27393-C-33Q.80.000495
noncoding27393C27393KCK220.111111
noncoding27393C27393TCT220.111111
noncoding27393C27393BCB220.111111
noncoding27393C27393TCT22A.270.003311
noncoding27393C27393BCB22All0
noncoding27393C27393KCK22All0
noncoding27393C27393TCT22AY.1100.000225
noncoding27393C27393TCT22AY.116.10.000623
noncoding27393C27393-C-22AY.1180.000125
noncoding27393C27393TCT22AY.120.10.000642
noncoding27393C27393TCT22AY.120.2.10.000997
noncoding27393C27393TCT22AY.130.000322
noncoding27393C27393TCT22AY.16.10.00094
noncoding27393C27393TCT22AY.180.020202
noncoding27393C27393TCT22AY.20.000712
noncoding27393C27393-C-22AY.260.000057
noncoding27393C27393-C-22AY.330.000134
noncoding27393C27393TCT22AY.4.10.001475
noncoding27393C27393TCT22AY.4.2.10.000298
noncoding27393C27393TCT22AY.480.00093
noncoding27393C27393TCT22AY.5.10.007519
noncoding27393C27393TCT22AY.5.30.000675
noncoding27393C27393ACA22AY.5.40.000553
noncoding27393C27393TCT22AY.540.000191
noncoding27393C27393TCT22AY.590.001059
noncoding27393C27393TCT22AY.650.001066
noncoding27393C27393TCT22AY.670.000929
noncoding27393C27393TCT22AY.690.000373
noncoding27393C27393TCT22AY.710.00095
noncoding27393C27393-C-22AY.840.000875
noncoding27393C27393TCT22AY.850.000854
noncoding27393C27393TCT22AY.880.001768
noncoding27393C27393TCT22AY.920.000575
noncoding27393C27393-C-22B.1.1.1890.003026
noncoding27393C27393TCT22B.1.1.280.000622
noncoding27393C27393TCT22B.1.1.2840.000215
noncoding27393C27393TCT22B.1.1.3680.006173
noncoding27393C27393TCT22B.1.1.410.012658
noncoding27393C27393ACA22B.1.1.70.000002
noncoding27393C27393TCT22B.1.177.160.001329
noncoding27393C27393TCT22B.1.177.60.001953
noncoding27393C27393TCT22B.1.177.730.001133
noncoding27393C27393TCT22B.1.177.830.002963
noncoding27393C27393TCT22B.1.177.840.013333
noncoding27393C27393-C-22B.1.177.860.000367
noncoding27393C27393GCG22B.1.20.000018
noncoding27393C27393TCT22B.1.214.20.001199
noncoding27393C27393-C-22B.1.258.110.000793
noncoding27393C27393-C-22B.1.3110.000549
noncoding27393C27393TCT22B.1.351.30.001753
noncoding27393C27393TCT22B.1.351.50.001199
noncoding27393C27393TCT22B.1.36.340.042553
noncoding27393C27393TCT22B.1.3670.001585
noncoding27393C27393TCT22B.1.4280.002041
noncoding27393C27393TCT22B.1.466.20.000782
noncoding27393C27393TCT22B.1.4740.003802
noncoding27393C27393TCT22B.1.5750.000607
noncoding27393C27393TCT22B.1.575.10.004878
noncoding27393C27393ACA22B.1.617.20.000008
noncoding27393C27393-C-22B.1.6210.000177
noncoding27393C27393TCT22B.1.621.10.001012
noncoding27393C27393TCT22B.400.000729
noncoding27393C27393TCT22L.30.007092
noncoding27393C27393TCT22P.1.70.000639
noncoding27393C27393TCT22Q.30.00029
noncoding27393C27393TCT22R.10.00018
noncoding27393C27393TCT11A.2.20.001689
noncoding27393C27393-C-11A.280.002646
noncoding27393C27393TCT11A.280.002646
noncoding27393C27393TCT11AD.20.000219
noncoding27393C27393TCT11AH.30.003802
noncoding27393C27393TCT11AY.10.000396
noncoding27393C27393TCT11AY.1010.00049
noncoding27393C27393ACA11AY.1020.000027
noncoding27393C27393-C-11AY.1020.000027
noncoding27393C27393TCT11AY.1040.001984
noncoding27393C27393-C-11AY.1060.000335
noncoding27393C27393-C-11AY.1070.000466
noncoding27393C27393-C-11AY.1080.001103
noncoding27393C27393-C-11AY.1130.000142
noncoding27393C27393-C-11AY.1140.000231
noncoding27393C27393TCT11AY.1140.000231
noncoding27393C27393TCT11AY.1150.005208
noncoding27393C27393-C-11AY.1170.000085
noncoding27393C27393TCT11AY.120.20.001285
noncoding27393C27393TCT11AY.150.002222
noncoding27393C27393TCT11AY.170.008197
noncoding27393C27393TCT11AY.190.00114
noncoding27393C27393-C-11AY.200.000039
noncoding27393C27393TCT11AY.23.10.000417
noncoding27393C27393TCT11AY.240.000431
noncoding27393C27393TCT11AY.280.00189
noncoding27393C27393GCG11AY.290.000016
noncoding27393C27393-C-11AY.29.10.000221
noncoding27393C27393-C-11AY.320.000532
noncoding27393C27393-C-11AY.340.000097
noncoding27393C27393TCT11AY.34.10.00051
noncoding27393C27393-C-11AY.39.10.00004
noncoding27393C27393GCG11AY.4.20.000022
noncoding27393C27393GCG11AY.430.000004
noncoding27393C27393ACA11AY.430.000004
noncoding27393C27393ACA11AY.440.000006
noncoding27393C27393-C-11AY.460.000104
noncoding27393C27393ACA11AY.460.000104
noncoding27393C27393TCT11AY.46.10.001027
noncoding27393C27393TCT11AY.46.20.000635
noncoding27393C27393-C-11AY.46.40.000165
noncoding27393C27393TCT11AY.46.50.000198
noncoding27393C27393-C-11AY.46.50.000198
noncoding27393C27393TCT11AY.490.003195
noncoding27393C27393GCG11AY.5.40.000277
noncoding27393C27393TCT11AY.500.000799
noncoding27393C27393-C-11AY.540.000095
noncoding27393C27393TCT11AY.560.001605
noncoding27393C27393TCT11AY.630.000387
noncoding27393C27393TCT11AY.640.000595
noncoding27393C27393-C-11AY.7.10.000113
noncoding27393C27393TCT11AY.7.20.000559
noncoding27393C27393-C-11AY.730.000665
noncoding27393C27393ACA11AY.740.000116
noncoding27393C27393-C-11AY.750.000056
noncoding27393C27393TCT11AY.770.001127
noncoding27393C27393-C-11AY.790.001211
noncoding27393C27393GCG11AY.790.001211
noncoding27393C27393-C-11AY.850.000427
noncoding27393C27393TCT11AY.860.00083
noncoding27393C27393TCT11AY.870.000833
noncoding27393C27393-C-11AY.9.10.000084
noncoding27393C27393-C-11AY.9.20.000037
noncoding27393C27393TCT11AY.910.00073
noncoding27393C27393TCT11AY.930.000273
noncoding27393C27393-C-11AY.940.000443
noncoding27393C27393TCT11AY.950.000761
noncoding27393C27393TCT11AY.970.001701
noncoding27393C27393-C-11AY.98.10.000048
noncoding27393C27393TCT11AY.990.001049
noncoding27393C27393-C-11AY.990.001049
noncoding27393C27393-C-11B0.000128
noncoding27393C27393TCT11B0.000128
noncoding27393C27393ACA11B.10.000009
noncoding27393C27393TCT11B.1.1.1280.007092
noncoding27393C27393TCT11B.1.1.1410.002012
noncoding27393C27393-C-11B.1.1.2070.001182
noncoding27393C27393TCT11B.1.1.2160.00089
noncoding27393C27393TCT11B.1.1.250.000569
noncoding27393C27393-C-11B.1.1.280.000311
noncoding27393C27393-C-11B.1.1.3110.000358
noncoding27393C27393TCT11B.1.1.3180.000302
noncoding27393C27393TCT11B.1.1.330.000421
noncoding27393C27393-C-11B.1.1.330.000421
noncoding27393C27393TCT11B.1.1.3480.000796
noncoding27393C27393TCT11B.1.1.4160.000905
noncoding27393C27393TCT11B.1.1.4480.002033
noncoding27393C27393-C-11B.1.1.5190.00004
noncoding27393C27393TCT11B.1.1.5250.005464
noncoding27393C27393-C-11B.1.1.630.000386
noncoding27393C27393ACA11B.1.1.630.000386
noncoding27393C27393TCT11B.1.1110.001175
noncoding27393C27393-C-11B.1.1150.021739
noncoding27393C27393-C-11B.1.1600.000031
noncoding27393C27393TCT11B.1.160.160.000929
noncoding27393C27393TCT11B.1.160.280.002924
noncoding27393C27393-C-11B.1.1610.017241
noncoding27393C27393-C-11B.1.1770.000013
noncoding27393C27393TCT11B.1.177.420.000894
noncoding27393C27393TCT11B.1.177.440.000519
noncoding27393C27393TCT11B.1.177.50.001242
noncoding27393C27393TCT11B.1.177.570.000281
noncoding27393C27393TCT11B.1.177.760.002494
noncoding27393C27393TCT11B.1.177.770.000726
noncoding27393C27393-C-11B.1.177.80.000752
noncoding27393C27393TCT11B.1.177.810.000189
noncoding27393C27393-C-11B.1.177.810.000189
noncoding27393C27393TCT11B.1.177.820.000477
noncoding27393C27393TCT11B.1.2130.014925
noncoding27393C27393TCT11B.1.2320.000537
noncoding27393C27393TCT11B.1.2360.002053
noncoding27393C27393-C-11B.1.2430.00007
noncoding27393C27393ACA11B.1.2580.000067
noncoding27393C27393TCT11B.1.2790.000514
noncoding27393C27393TCT11B.1.2810.021739
noncoding27393C27393TCT11B.1.3240.001605
noncoding27393C27393TCT11B.1.3290.000608
noncoding27393C27393-C-11B.1.3400.004292
noncoding27393C27393-C-11B.1.3510.00003
noncoding27393C27393TCT11B.1.36.220.001208
noncoding27393C27393TCT11B.1.36.260.002857
noncoding27393C27393TCT11B.1.36.290.000517
noncoding27393C27393TCT11B.1.36.390.002217
noncoding27393C27393TCT11B.1.3620.001541
noncoding27393C27393TCT11B.1.3690.000285
noncoding27393C27393-C-11B.1.3810.007812
noncoding27393C27393ACA11B.1.3980.002976
noncoding27393C27393TCT11B.1.4080.00369
noncoding27393C27393TCT11B.1.4090.000781
noncoding27393C27393-C-11B.1.4160.001269
noncoding27393C27393-C-11B.1.4270.00005
noncoding27393C27393-C-11B.1.4290.000024
noncoding27393C27393-C-11B.1.466.20.000391
noncoding27393C27393TCT11B.1.4680.005714
noncoding27393C27393-C-11B.1.4680.005714
noncoding27393C27393-C-11B.1.4700.001404
noncoding27393C27393TCT11B.1.5030.002488
noncoding27393C27393TCT11B.1.5090.000866
noncoding27393C27393-C-11B.1.5250.000113
noncoding27393C27393TCT11B.1.5510.00129
noncoding27393C27393TCT11B.1.5640.000426
noncoding27393C27393TCT11B.1.5680.001111
noncoding27393C27393-C-11B.1.5770.000687
noncoding27393C27393-C-11B.1.5960.000087
noncoding27393C27393GCG11B.1.617.20.000004
noncoding27393C27393-C-11B.1.617.30.002985
noncoding27393C27393TCT11B.1.6180.004032
noncoding27393C27393TCT11B.1.6190.000871
noncoding27393C27393-C-11B.1.6200.000946
noncoding27393C27393ACA11B.1.6210.000089
noncoding27393C27393TCT11B.1.6230.000536
noncoding27393C27393TCT11B.1.6280.000352
noncoding27393C27393-C-11B.1.6290.013333
noncoding27393C27393-C-11B.1.6300.005236
noncoding27393C27393TCT11B.1.6360.006711
noncoding27393C27393ACA11B.1.6370.000073
noncoding27393C27393TCT11B.1.930.000934
noncoding27393C27393TCT11B.280.003279
noncoding27393C27393TCT11B.40.002208
noncoding27393C27393TCT11C.1.20.004255
noncoding27393C27393TCT11C.360.000911
noncoding27393C27393TCT11C.400.027778
noncoding27393C27393-C-11D.20.000075
noncoding27393C27393ACA11P.10.000016
noncoding27393C27393TCT11P.1.130.000898
noncoding27393C27393TCT11P.1.150.000232
noncoding27393C27393TCT11P.1.160.000374
noncoding27393C27393TCT11P.1.20.001156
noncoding27393C27393TCT11P.1.80.004785
noncoding27393C27393TCT11P.30.001595
noncoding27393C27393TCT11Q.20.000613
noncoding27393C27393-C-11Q.30.000145
noncoding27393C27393TCT11Q.60.006623
noncoding27393C27393-C-11U.30.003861