CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = noncoding : CodonNum = 26222

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
noncoding26222C26222TnoncodingCT38113811126222-26222
noncoding26222C26222-noncodingC-7777126222-26222
noncoding26222C26222AnoncodingCA1111126222-26222

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
noncoding26222C26222TCT38113811All0.000729
noncoding26222C26222TCT27922792B.1.6280.983791
noncoding26222C26222TCT471471B.1.6270.951515
noncoding26222C26222TCT293293B.1.6310.986532
noncoding26222C26222TCT9292B.10.000843
noncoding26222C26222-C-7777All0.000015
noncoding26222C26222-C-6161P.1.100.016438
noncoding26222C26222TCT1919B.1.1.70.000017
noncoding26222C26222TCT1616B.1.6090.00767
noncoding26222C26222TCT1414AY.40.000022
noncoding26222C26222TCT1212B.1.617.20.000045
noncoding26222C26222ACA1111All0.000002
noncoding26222C26222TCT1111B.1.10.0002
noncoding26222C26222TCT1111B.1.20.000097
noncoding26222C26222TCT1111P.1.120.005324
noncoding26222C26222-C-77B.1.1.70.000006
noncoding26222C26222TCT55B.1.3510.000149
noncoding26222C26222TCT44AY.98.10.000194
noncoding26222C26222TCT44B0.000511
noncoding26222C26222TCT44B.1.1770.000053
noncoding26222C26222-C-220.111111
noncoding26222C26222TCT22AY.1190.000071
noncoding26222C26222TCT22AY.250.000012
noncoding26222C26222TCT22AY.430.000009
noncoding26222C26222TCT22AY.440.000012
noncoding26222C26222TCT22AY.450.000243
noncoding26222C26222TCT22B.1.1.5190.000079
noncoding26222C26222TCT22B.1.4740.003802
noncoding26222C26222TCT22B.1.5960.000174
noncoding26222C26222TCT22B.1.6370.000146
noncoding26222C26222TCT110.055556
noncoding26222C26222TCT11A.2.5.20.001572
noncoding26222C26222TCT11AU.20.002421
noncoding26222C26222TCT11AY.1000.000046
noncoding26222C26222ACA11AY.1030.000006
noncoding26222C26222TCT11AY.1130.000142
noncoding26222C26222-C-11AY.1180.000063
noncoding26222C26222TCT11AY.1200.000037
noncoding26222C26222ACA11AY.230.00007
noncoding26222C26222TCT11AY.290.000016
noncoding26222C26222TCT11AY.380.000499
noncoding26222C26222ACA11AY.390.000025
noncoding26222C26222ACA11AY.420.00004
noncoding26222C26222TCT11AY.420.00004
noncoding26222C26222-C-11AY.430.000004
noncoding26222C26222-C-11AY.440.000006
noncoding26222C26222-C-11AY.470.000031
noncoding26222C26222TCT11AY.610.000105
noncoding26222C26222TCT11AY.670.000464
noncoding26222C26222-C-11AY.680.000274
noncoding26222C26222TCT11AY.720.001361
noncoding26222C26222TCT11AY.730.000665
noncoding26222C26222-C-11AY.750.000056
noncoding26222C26222ACA11AY.90.000068
noncoding26222C26222TCT11AY.9.20.000037
noncoding26222C26222TCT11AY.960.002075
noncoding26222C26222ACA11B0.000128
noncoding26222C26222-C-11B.10.000009
noncoding26222C26222TCT11B.1.1.1170.009709
noncoding26222C26222ACA11B.1.1.1530.001095
noncoding26222C26222TCT11B.1.1.2040.00304
noncoding26222C26222TCT11B.1.1.2940.001266
noncoding26222C26222TCT11B.1.1.3070.002532
noncoding26222C26222ACA11B.1.1.3180.000302
noncoding26222C26222TCT11B.1.1.5260.003546
noncoding26222C26222ACA11B.1.1.70.000001
noncoding26222C26222TCT11B.1.177.350.000691
noncoding26222C26222TCT11B.1.177.730.000566
noncoding26222C26222TCT11B.1.2210.000071
noncoding26222C26222TCT11B.1.2470.014925
noncoding26222C26222TCT11B.1.2580.000067
noncoding26222C26222TCT11B.1.3560.001727
noncoding26222C26222ACA11B.1.36.80.001
noncoding26222C26222TCT11B.1.3960.000706
noncoding26222C26222TCT11B.1.4270.00005
noncoding26222C26222TCT11B.1.5260.000024
noncoding26222C26222TCT11B.1.6210.000089
noncoding26222C26222TCT11C.370.000116
noncoding26222C26222ACA11D.20.000075
noncoding26222C26222TCT11D.20.000075
noncoding26222C26222TCT11P.10.000016
noncoding26222C26222TCT11Q.10.000126