CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = noncoding : CodonNum = 248

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
noncoding248G248TnoncodingGT7617611248-248
noncoding248G248-noncodingG-1711711248-248
noncoding248G248AnoncodingGA44441248-248
noncoding248G248CnoncodingGC17171248-248

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
noncoding248G248TGT761761All0.000146
noncoding248G248TGT441441B.1.5740.948387
noncoding248G248-G-171171All0.000033
noncoding248G248TGT139139B.1.20.001224
noncoding248G248-G-4949B.1.1.70.000044
noncoding248G248AGA4444All0.000008
noncoding248G248AGA2626AY.430.000115
noncoding248G248TGT2323B.1.1.70.000021
noncoding248G248TGT1919B.10.000174
noncoding248G248CGC1717All0.000003
noncoding248G248TGT1717AY.40.000026
noncoding248G248TGT1616B.1.617.20.00006
noncoding248G248TGT1414P.10.000221
noncoding248G248-G-1313AY.40.00002
noncoding248G248CGC1111AY.40.000017
noncoding248G248-G-1010AY.230.000697
noncoding248G248-G-99AY.430.00004
noncoding248G248TGT99AY.430.00004
noncoding248G248TGT88AY.610.000838
noncoding248G248TGT77AY.1130.000997
noncoding248G248-G-77B.1.1770.000092
noncoding248G248TGT66AY.1000.000276
noncoding248G248-G-66AY.4.50.000645
noncoding248G248TGT66B.1.5960.000523
noncoding248G248TGT55AY.270.000324
noncoding248G248TGT55AY.440.00003
noncoding248G248TGT55B.1.10.000091
noncoding248G248TGT44AY.60.000165
noncoding248G248-G-44B.1.1.330.001684
noncoding248G248-G-44B.1.1.3480.003185
noncoding248G248AGA44B.1.1.70.000004
noncoding248G248TGT33AY.1030.000019
noncoding248G248TGT33AY.20.001068
noncoding248G248TGT33AY.390.000074
noncoding248G248AGA33AY.40.000005
noncoding248G248TGT33AY.860.00249
noncoding248G248AGA33B.1.1770.00004
noncoding248G248TGT33B.1.1770.00004
noncoding248G248-G-22AY.120.000632
noncoding248G248-G-22AY.1200.000074
noncoding248G248-G-22AY.190.002281
noncoding248G248TGT22AY.250.000012
noncoding248G248-G-22AY.330.000134
noncoding248G248-G-22AY.34.10.00102
noncoding248G248-G-22AY.4.40.000818
noncoding248G248-G-22AY.450.000243
noncoding248G248TGT22AY.590.001059
noncoding248G248-G-22AY.600.001876
noncoding248G248CGC22AY.70.000392
noncoding248G248-G-22AY.90.000135
noncoding248G248-G-22B.1.177.580.002663
noncoding248G248-G-22B.1.20.000018
noncoding248G248TGT22B.1.3510.000059
noncoding248G248-G-22B.1.360.000292
noncoding248G248-G-22B.1.617.20.000008
noncoding248G248-G-22N.60.014184
noncoding248G248TGT22P.1.150.000465
noncoding248G248-G-22P.20.000373
noncoding248G248-G-11A.10.000282
noncoding248G248CGC11AY.1020.000027
noncoding248G248TGT11AY.1110.000183
noncoding248G248CGC11AY.1140.000231
noncoding248G248-G-11AY.1160.000287
noncoding248G248TGT11AY.1200.000037
noncoding248G248-G-11AY.250.000006
noncoding248G248-G-11AY.260.000028
noncoding248G248TGT11AY.260.000028
noncoding248G248TGT11AY.30.00001
noncoding248G248-G-11AY.30.00001
noncoding248G248TGT11AY.330.000067
noncoding248G248-G-11AY.380.000499
noncoding248G248CGC11AY.4.20.000022
noncoding248G248-G-11AY.410.000294
noncoding248G248TGT11AY.420.00004
noncoding248G248AGA11AY.440.000006
noncoding248G248-G-11AY.460.000104
noncoding248G248-G-11AY.46.20.000635
noncoding248G248TGT11AY.46.60.000072
noncoding248G248AGA11AY.550.000917
noncoding248G248-G-11AY.590.00053
noncoding248G248-G-11AY.60.000041
noncoding248G248-G-11AY.610.000105
noncoding248G248-G-11AY.680.000274
noncoding248G248TGT11AY.750.000056
noncoding248G248-G-11AY.75.10.00018
noncoding248G248-G-11AY.9.10.000084
noncoding248G248AGA11AY.9.20.000037
noncoding248G248-G-11AY.940.000443
noncoding248G248-G-11AY.950.000761
noncoding248G248-G-11AY.98.10.000048
noncoding248G248TGT11AY.99.20.000092
noncoding248G248AGA11B0.000128
noncoding248G248-G-11B.10.000009
noncoding248G248-G-11B.1.10.000018
noncoding248G248-G-11B.1.1.1390.022727
noncoding248G248-G-11B.1.1.1700.001247
noncoding248G248-G-11B.1.1.2320.001815
noncoding248G248TGT11B.1.1.3060.000438
noncoding248G248-G-11B.1.1.3110.000358
noncoding248G248TGT11B.1.1.3170.000412
noncoding248G248-G-11B.1.1.3220.008772
noncoding248G248TGT11B.1.1.370.000193
noncoding248G248-G-11B.1.1.4090.002833
noncoding248G248CGC11B.1.1.70.000001
noncoding248G248-G-11B.1.1600.000031
noncoding248G248-G-11B.1.177.170.000821
noncoding248G248-G-11B.1.177.180.00116
noncoding248G248-G-11B.1.177.210.000076
noncoding248G248AGA11B.1.177.40.000211
noncoding248G248AGA11B.1.2340.000132
noncoding248G248TGT11B.1.2430.00007
noncoding248G248-G-11B.1.2580.000067
noncoding248G248-G-11B.1.36.170.000494
noncoding248G248-G-11B.1.36.180.00042
noncoding248G248-G-11B.1.4160.001269
noncoding248G248-G-11B.1.4290.000024
noncoding248G248AGA11B.1.5260.000024
noncoding248G248AGA11B.1.617.20.000004
noncoding248G248TGT11B.1.6210.000089
noncoding248G248-G-11C.350.000774
noncoding248G248-G-11N.40.004255
noncoding248G248-G-11P.10.000016
noncoding248G248-G-11Q.80.000165