CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = noncoding : CodonNum = 245

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
noncoding245C245TnoncodingCT284928491245-245
noncoding245C245-noncodingC-1301301245-245
noncoding245C245AnoncodingCA84841245-245
noncoding245C245GnoncodingCG13131245-245

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
noncoding245C245TCT28492849All0.000545
noncoding245C245TCT436436AY.40.000679
noncoding245C245TCT423423B.1.20.003725
noncoding245C245TCT412412B.1.1.70.000369
noncoding245C245TCT190190AY.440.001156
noncoding245C245TCT189189B.1.5990.689781
noncoding245C245TCT143143B.1.10.002594
noncoding245C245-C-130130All0.000025
noncoding245C245TCT114114AY.430.000505
noncoding245C245TCT9898B.1.438.10.010512
noncoding245C245TCT9696B.1.617.20.000361
noncoding245C245ACA8484All0.000016
noncoding245C245TCT7878B.1.2340.010292
noncoding245C245TCT6161AY.920.017524
noncoding245C245TCT6060AY.250.000361
noncoding245C245TCT4242AY.330.002805
noncoding245C245TCT3333B.1.1770.000435
noncoding245C245TCT3232B.1.80.063116
noncoding245C245TCT3131AY.30.000308
noncoding245C245-C-3131B.1.1.70.000028
noncoding245C245TCT2626AY.39.10.00103
noncoding245C245TCT2424B.10.00022
noncoding245C245TCT2020AY.1030.000124
noncoding245C245TCT1717B.1.5960.001481
noncoding245C245TCT1616AY.420.000644
noncoding245C245TCT1515AY.260.000425
noncoding245C245ACA1515B.1.160.140.03178
noncoding245C245GCG1313All0.000002
noncoding245C245TCT1212AY.1000.000552
noncoding245C245TCT1212P.10.000189
noncoding245C245ACA1010AY.1030.000062
noncoding245C245-C-1010AY.230.000697
noncoding245C245TCT1010AY.460.001041
noncoding245C245-C-99AY.430.00004
noncoding245C245TCT99B.1.6370.000658
noncoding245C245TCT99C.370.001045
noncoding245C245TCT88AY.50.000165
noncoding245C245ACA88B.1.1.70.000007
noncoding245C245TCT88B.1.6210.000708
noncoding245C245TCT77A.23.10.00493
noncoding245C245TCT77AY.390.000173
noncoding245C245ACA77AY.40.000011
noncoding245C245TCT77B.1.1.3180.002112
noncoding245C245TCT77B.1.1.440.016867
noncoding245C245TCT77B.1.2580.000466
noncoding245C245TCT77P.1.140.000335
noncoding245C245-C-66AY.40.000009
noncoding245C245ACA66AY.430.000027
noncoding245C245TCT66D.20.00045
noncoding245C245TCT55AY.140.00044
noncoding245C245TCT55AY.23.10.002087
noncoding245C245ACA55AY.250.00003
noncoding245C245TCT55AY.3.10.000426
noncoding245C245TCT55AY.46.60.000361
noncoding245C245ACA55AY.46.60.000361
noncoding245C245TCT44AY.320.00213
noncoding245C245ACA44B.1.1.3170.001647
noncoding245C245-C-44B.1.1.330.001684
noncoding245C245-C-44B.1.1.3480.003185
noncoding245C245TCT44B.1.1.4330.005698
noncoding245C245TCT44B.1.1.4480.00813
noncoding245C245TCT44B.1.1.500.002716
noncoding245C245TCT44B.1.1.5190.000159
noncoding245C245GCG44B.1.1.70.000004
noncoding245C245TCT44B.1.1600.000125
noncoding245C245-C-44B.1.1770.000053
noncoding245C245-C-44B.1.617.20.000015
noncoding245C245TCT44B.1.6280.001409
noncoding245C245TCT44Q.80.00066
noncoding245C245TCT33AY.1020.00008
noncoding245C245TCT33AY.1200.000112
noncoding245C245TCT33AY.4.2.10.000447
noncoding245C245ACA33AY.440.000018
noncoding245C245TCT33AY.470.000093
noncoding245C245TCT33AY.980.000237
noncoding245C245ACA33AY.99.10.004658
noncoding245C245TCT33AY.99.20.000276
noncoding245C245ACA33B.10.000027
noncoding245C245TCT33B.1.1.2770.002276
noncoding245C245TCT33B.1.1.2840.000322
noncoding245C245TCT33B.1.1.3060.001315
noncoding245C245TCT33B.1.1.4160.002715
noncoding245C245TCT33B.1.1110.003525
noncoding245C245TCT33B.1.2210.000213
noncoding245C245TCT33B.1.2400.000647
noncoding245C245TCT33B.1.3510.000089
noncoding245C245TCT33B.1.4270.000151
noncoding245C245TCT22AY.1130.000285
noncoding245C245-C-22AY.120.000632
noncoding245C245TCT22AY.20.000712
noncoding245C245ACA22AY.330.000134
noncoding245C245-C-22AY.330.000134
noncoding245C245TCT22AY.340.000194
noncoding245C245-C-22AY.34.10.00102
noncoding245C245GCG22AY.40.000003
noncoding245C245-C-22AY.4.40.000818
noncoding245C245-C-22AY.450.000243
noncoding245C245TCT22AY.610.00021
noncoding245C245TCT22AY.840.000875
noncoding245C245-C-22AY.90.000135
noncoding245C245GCG22B.1.1.1530.002191
noncoding245C245TCT22B.1.1.3480.001592
noncoding245C245TCT22B.1.1.4340.000697
noncoding245C245TCT22B.1.1.950.039216
noncoding245C245ACA22B.1.20.000018
noncoding245C245-C-22B.1.20.000018
noncoding245C245TCT22B.1.3110.000549
noncoding245C245-C-22B.1.360.000292
noncoding245C245TCT22B.1.4200.020833
noncoding245C245TCT22B.1.4290.000047
noncoding245C245TCT22B.1.5170.000854
noncoding245C245TCT22B.1.5950.000522
noncoding245C245-C-22N.60.014184
noncoding245C245-C-22P.20.000373
noncoding245C245-C-11A.10.000282
noncoding245C245ACA11A.10.000282
noncoding245C245TCT11AY.1090.00074
noncoding245C245TCT11AY.110.001339
noncoding245C245TCT11AY.1140.000231
noncoding245C245TCT11AY.1160.000287
noncoding245C245-C-11AY.1160.000287
noncoding245C245TCT11AY.1170.000085
noncoding245C245TCT11AY.1180.000063
noncoding245C245-C-11AY.1200.000037
noncoding245C245TCT11AY.120.10.000321
noncoding245C245TCT11AY.1210.000135
noncoding245C245TCT11AY.160.00038
noncoding245C245TCT11AY.230.00007
noncoding245C245-C-11AY.250.000006
noncoding245C245-C-11AY.260.000028
noncoding245C245TCT11AY.270.000065
noncoding245C245-C-11AY.30.00001
noncoding245C245TCT11AY.300.000396
noncoding245C245TCT11AY.360.000148
noncoding245C245-C-11AY.380.000499
noncoding245C245ACA11AY.390.000025
noncoding245C245TCT11AY.4.20.000022
noncoding245C245TCT11AY.4.30.000842
noncoding245C245-C-11AY.4.50.000107
noncoding245C245-C-11AY.410.000294
noncoding245C245-C-11AY.460.000104
noncoding245C245TCT11AY.5.30.000337
noncoding245C245TCT11AY.520.000814
noncoding245C245TCT11AY.540.000095
noncoding245C245-C-11AY.590.00053
noncoding245C245-C-11AY.60.000041
noncoding245C245-C-11AY.600.000938
noncoding245C245-C-11AY.680.000274
noncoding245C245TCT11AY.740.000116
noncoding245C245TCT11AY.750.000056
noncoding245C245-C-11AY.75.10.00018
noncoding245C245TCT11AY.75.10.00018
noncoding245C245TCT11AY.870.000833
noncoding245C245-C-11AY.9.10.000084
noncoding245C245TCT11AY.910.00073
noncoding245C245-C-11AY.940.000443
noncoding245C245-C-11AY.950.000761
noncoding245C245GCG11AY.950.000761
noncoding245C245TCT11AY.950.000761
noncoding245C245ACA11AY.960.002075
noncoding245C245TCT11AY.960.002075
noncoding245C245-C-11AY.98.10.000048
noncoding245C245TCT11AY.98.10.000048
noncoding245C245-C-11B.10.000009
noncoding245C245GCG11B.10.000009
noncoding245C245-C-11B.1.10.000018
noncoding245C245-C-11B.1.1.1390.022727
noncoding245C245-C-11B.1.1.1700.001247
noncoding245C245TCT11B.1.1.1980.001468
noncoding245C245TCT11B.1.1.2140.000055
noncoding245C245TCT11B.1.1.2160.00089
noncoding245C245TCT11B.1.1.2220.000204
noncoding245C245-C-11B.1.1.2320.001815
noncoding245C245TCT11B.1.1.2370.005405
noncoding245C245TCT11B.1.1.2690.001353
noncoding245C245ACA11B.1.1.280.000311
noncoding245C245-C-11B.1.1.3110.000358
noncoding245C245-C-11B.1.1.3220.008772
noncoding245C245ACA11B.1.1.390.00051
noncoding245C245-C-11B.1.1.4090.002833
noncoding245C245TCT11B.1.1.4860.001577
noncoding245C245ACA11B.1.1570.002985
noncoding245C245ACA11B.1.1600.000031
noncoding245C245-C-11B.1.1600.000031
noncoding245C245-C-11B.1.177.180.00116
noncoding245C245-C-11B.1.177.210.000076
noncoding245C245TCT11B.1.177.350.000691
noncoding245C245TCT11B.1.177.520.001757
noncoding245C245TCT11B.1.2100.002132
noncoding245C245TCT11B.1.2230.002778
noncoding245C245TCT11B.1.2520.006623
noncoding245C245GCG11B.1.2580.000067
noncoding245C245-C-11B.1.2580.000067
noncoding245C245TCT11B.1.30.002618
noncoding245C245ACA11B.1.3010.005917
noncoding245C245TCT11B.1.3020.013333
noncoding245C245TCT11B.1.351.20.000303
noncoding245C245-C-11B.1.36.180.00042
noncoding245C245TCT11B.1.36.360.000602
noncoding245C245TCT11B.1.3670.000792
noncoding245C245TCT11B.1.3690.000285
noncoding245C245TCT11B.1.3710.001122
noncoding245C245-C-11B.1.4160.001269
noncoding245C245TCT11B.1.416.10.001563
noncoding245C245-C-11B.1.4290.000024
noncoding245C245TCT11B.1.5260.000024
noncoding245C245TCT11B.1.5320.006211
noncoding245C245TCT11B.1.5750.000303
noncoding245C245GCG11B.1.5950.000261
noncoding245C245ACA11B.1.617.20.000004
noncoding245C245ACA11B.1.6230.000536
noncoding245C245TCT11B.1.780.008547
noncoding245C245TCT11B.400.000364
noncoding245C245ACA11B.6.60.000889
noncoding245C245-C-11C.350.000774
noncoding245C245TCT11C.350.000774
noncoding245C245TCT11C.36.30.000567
noncoding245C245GCG11D.20.000075
noncoding245C245-C-11N.40.004255
noncoding245C245-C-11P.10.000016
noncoding245C245TCT11Q.10.000126
noncoding245C245-C-11Q.80.000165