CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
noncoding | 222 | C222T | noncoding | C | T | 60054 | 60054 | 1 | 222-222 | |
noncoding | 222 | C222- | noncoding | C | - | 822 | 822 | 1 | 222-222 | |
noncoding | 222 | C222G | noncoding | C | G | 99 | 99 | 1 | 222-222 | |
noncoding | 222 | C222A | noncoding | C | A | 74 | 74 | 1 | 222-222 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
noncoding | 222 | C222T | C | T | 60054 | 60054 | All | 0.011486 |
noncoding | 222 | C222T | C | T | 24013 | 24013 | B.1.1.519 | 0.953578 |
noncoding | 222 | C222T | C | T | 6513 | 6513 | B.1.177.12 | 0.988016 |
noncoding | 222 | C222T | C | T | 5372 | 5372 | B.1.177 | 0.070736 |
noncoding | 222 | C222T | C | T | 3486 | 3486 | B.1.160 | 0.10872 |
noncoding | 222 | C222T | C | T | 2913 | 2913 | B.1.1.7 | 0.002608 |
noncoding | 222 | C222T | C | T | 1753 | 1753 | B.1.177.44 | 0.909704 |
noncoding | 222 | C222T | C | T | 1352 | 1352 | B.1.177.35 | 0.934347 |
noncoding | 222 | C222T | C | T | 1097 | 1097 | B.1.177.42 | 0.981216 |
noncoding | 222 | C222T | C | T | 986 | 986 | AY.4 | 0.001535 |
noncoding | 222 | C222T | C | T | 825 | 825 | AY.73 | 0.548902 |
noncoding | 222 | C222- | C | - | 822 | 822 | All | 0.000157 |
noncoding | 222 | C222T | C | T | 739 | 739 | P.1 | 0.011642 |
noncoding | 222 | C222T | C | T | 734 | 734 | B.1.221 | 0.052138 |
noncoding | 222 | C222T | C | T | 679 | 679 | B.1 | 0.006219 |
noncoding | 222 | C222T | C | T | 633 | 633 | B.1.177.43 | 0.935007 |
noncoding | 222 | C222T | C | T | 593 | 593 | AY.44 | 0.003609 |
noncoding | 222 | C222T | C | T | 565 | 565 | AY.25 | 0.003398 |
noncoding | 222 | C222T | C | T | 554 | 554 | AY.6 | 0.022785 |
noncoding | 222 | C222T | C | T | 524 | 524 | B.1.427 | 0.026461 |
noncoding | 222 | C222T | C | T | 487 | 487 | B.1.1 | 0.008835 |
noncoding | 222 | C222T | C | T | 445 | 445 | B.1.617.2 | 0.001676 |
noncoding | 222 | C222T | C | T | 393 | 393 | B.1.177.41 | 0.9825 |
noncoding | 222 | C222T | C | T | 385 | 385 | AY.43 | 0.001706 |
noncoding | 222 | C222T | C | T | 359 | 359 | B.1.2 | 0.003161 |
noncoding | 222 | C222T | C | T | 339 | 339 | B.1.36.29 | 0.175375 |
noncoding | 222 | C222T | C | T | 201 | 201 | C.16 | 0.21315 |
noncoding | 222 | C222T | C | T | 199 | 199 | AY.26 | 0.005634 |
noncoding | 222 | C222T | C | T | 187 | 187 | B.1.177.40 | 0.963918 |
noncoding | 222 | C222- | C | - | 163 | 163 | B.1.1.7 | 0.000146 |
noncoding | 222 | C222T | C | T | 136 | 136 | AY.103 | 0.000844 |
noncoding | 222 | C222T | C | T | 125 | 125 | B.1.243 | 0.008698 |
noncoding | 222 | C222T | C | T | 109 | 109 | B.1.526 | 0.002562 |
noncoding | 222 | C222G | C | G | 99 | 99 | All | 0.000019 |
noncoding | 222 | C222T | C | T | 94 | 94 | B.1.1.39 | 0.04791 |
noncoding | 222 | C222T | C | T | 92 | 92 | AY.4.2 | 0.001995 |
noncoding | 222 | C222T | C | T | 91 | 91 | AY.3 | 0.000905 |
noncoding | 222 | C222T | C | T | 91 | 91 | B.1.177.38 | 0.947917 |
noncoding | 222 | C222G | C | G | 82 | 82 | B.1.1.7 | 0.000073 |
noncoding | 222 | C222T | C | T | 81 | 81 | AY.9 | 0.005475 |
noncoding | 222 | C222A | C | A | 74 | 74 | All | 0.000014 |
noncoding | 222 | C222T | C | T | 73 | 73 | AY.20 | 0.002837 |
noncoding | 222 | C222T | C | T | 66 | 66 | B.1.160.27 | 1 |
noncoding | 222 | C222T | C | T | 65 | 65 | AY.5 | 0.001342 |
noncoding | 222 | C222- | C | - | 64 | 64 | B.1.177.81 | 0.012117 |
noncoding | 222 | C222T | C | T | 62 | 62 | AY.47 | 0.001929 |
noncoding | 222 | C222T | C | T | 62 | 62 | B.1.177.36 | 1 |
noncoding | 222 | C222- | C | - | 61 | 61 | AY.4 | 0.000095 |
noncoding | 222 | C222T | C | T | 60 | 60 | B.1.177.39 | 0.923077 |
noncoding | 222 | C222T | C | T | 60 | 60 | B.1.258 | 0.003993 |
noncoding | 222 | C222T | C | T | 58 | 58 | AY.29 | 0.000915 |
noncoding | 222 | C222T | C | T | 57 | 57 | B.1.160.30 | 0.169643 |
noncoding | 222 | C222T | C | T | 56 | 56 | B.1.160.16 | 0.052045 |
noncoding | 222 | C222T | C | T | 53 | 53 | AY.39 | 0.00131 |
noncoding | 222 | C222T | C | T | 52 | 52 | B.1.429 | 0.001224 |
noncoding | 222 | C222T | C | T | 50 | 50 | AY.102 | 0.001326 |
noncoding | 222 | C222T | C | T | 50 | 50 | B.1.36 | 0.007295 |
noncoding | 222 | C222T | C | T | 46 | 46 | B.1.1.284 | 0.00494 |
noncoding | 222 | C222T | C | T | 45 | 45 | B.1.1.161 | 0.159011 |
noncoding | 222 | C222T | C | T | 45 | 45 | B.1.258.17 | 0.004679 |
noncoding | 222 | C222- | C | - | 41 | 41 | B.1.1.519 | 0.001628 |
noncoding | 222 | C222T | C | T | 39 | 39 | AY.100 | 0.001794 |
noncoding | 222 | C222T | C | T | 39 | 39 | B.1.234 | 0.005146 |
noncoding | 222 | C222T | C | T | 36 | 36 | B.1.1.214 | 0.001996 |
noncoding | 222 | C222- | C | - | 34 | 34 | B.1.1.346 | 1 |
noncoding | 222 | C222T | C | T | 34 | 34 | P.1.12 | 0.016457 |
noncoding | 222 | C222T | C | T | 33 | 33 | AY.33 | 0.002204 |
noncoding | 222 | C222T | C | T | 33 | 33 | B.1.177.37 | 0.891892 |
noncoding | 222 | C222T | C | T | 32 | 32 | B.1.1.222 | 0.006528 |
noncoding | 222 | C222T | C | T | 31 | 31 | AY.36 | 0.004595 |
noncoding | 222 | C222T | C | T | 31 | 31 | B.1.517 | 0.013237 |
noncoding | 222 | C222T | C | T | 30 | 30 | AY.119 | 0.001059 |
noncoding | 222 | C222T | C | T | 27 | 27 | A.19 | 0.254717 |
noncoding | 222 | C222- | C | - | 27 | 27 | B.1.2 | 0.000238 |
noncoding | 222 | C222T | C | T | 26 | 26 | B.1.1.306 | 0.011399 |
noncoding | 222 | C222- | C | - | 26 | 26 | B.1.617.2 | 0.000098 |
noncoding | 222 | C222- | C | - | 25 | 25 | AY.4.5 | 0.002687 |
noncoding | 222 | C222T | C | T | 25 | 25 | B.1.177.19 | 0.035765 |
noncoding | 222 | C222T | C | T | 25 | 25 | B.1.351 | 0.000743 |
noncoding | 222 | C222T | C | T | 23 | 23 | B.1.1.28 | 0.007158 |
noncoding | 222 | C222A | C | A | 23 | 23 | B.1.1.7 | 0.000021 |
noncoding | 222 | C222T | C | T | 22 | 22 | B.1.1.432 | 0.027848 |
noncoding | 222 | C222T | C | T | 22 | 22 | C.36 | 0.020036 |
noncoding | 222 | C222- | C | - | 22 | 22 | P.1 | 0.000347 |
noncoding | 222 | C222- | C | - | 21 | 21 | B.1.1 | 0.000381 |
noncoding | 222 | C222T | C | T | 21 | 21 | B.1.131 | 0.184211 |
noncoding | 222 | C222T | C | T | 21 | 21 | B.1.621 | 0.001859 |
noncoding | 222 | C222T | C | T | 20 | 20 | AY.120 | 0.000744 |
noncoding | 222 | C222- | C | - | 20 | 20 | AY.43 | 0.000089 |
noncoding | 222 | C222- | C | - | 20 | 20 | AY.44 | 0.000122 |
noncoding | 222 | C222T | C | T | 20 | 20 | C.37 | 0.002321 |
noncoding | 222 | C222T | C | T | 19 | 19 | AY.93 | 0.005188 |
noncoding | 222 | C222T | C | T | 18 | 18 | B.1.1.70 | 0.006139 |
noncoding | 222 | C222T | C | T | 18 | 18 | P.1.7 | 0.005747 |
noncoding | 222 | C222T | C | T | 17 | 17 | B.1.1.317 | 0.006999 |
noncoding | 222 | C222T | C | T | 17 | 17 | B.1.596 | 0.001481 |
noncoding | 222 | C222T | C | T | 17 | 17 | Q.8 | 0.002803 |
noncoding | 222 | C222T | C | T | 16 | 16 | AY.113 | 0.002278 |
noncoding | 222 | C222- | C | - | 16 | 16 | B.1.160 | 0.000499 |
noncoding | 222 | C222T | C | T | 16 | 16 | B.1.177.21 | 0.001224 |
noncoding | 222 | C222T | C | T | 16 | 16 | B.1.561 | 0.006352 |
noncoding | 222 | C222T | C | T | 15 | 15 | AY.45 | 0.001825 |
noncoding | 222 | C222T | C | T | 15 | 15 | AY.53 | 0.004313 |
noncoding | 222 | C222T | C | T | 15 | 15 | B.1.160.17 | 0.02551 |
noncoding | 222 | C222T | C | T | 14 | 14 | A.1 | 0.003946 |
noncoding | 222 | C222T | C | T | 14 | 14 | AY.21 | 0.026565 |
noncoding | 222 | C222- | C | - | 14 | 14 | AY.25 | 0.000084 |
noncoding | 222 | C222- | C | - | 14 | 14 | B.1.433 | 0.044728 |
noncoding | 222 | C222T | C | T | 14 | 14 | C.26 | 0.102941 |
noncoding | 222 | C222T | C | T | 13 | 13 | AY.42 | 0.000523 |
noncoding | 222 | C222T | C | T | 13 | 13 | AY.46 | 0.001353 |
noncoding | 222 | C222T | C | T | 13 | 13 | AY.75 | 0.000728 |
noncoding | 222 | C222T | C | T | 13 | 13 | B.1.1.216 | 0.011576 |
noncoding | 222 | C222T | C | T | 13 | 13 | P.2 | 0.002426 |
noncoding | 222 | C222T | C | T | 13 | 13 | R.1 | 0.00117 |
noncoding | 222 | C222T | C | T | 12 | 12 | AY.69 | 0.00224 |
noncoding | 222 | C222T | C | T | 12 | 12 | AY.88 | 0.01061 |
noncoding | 222 | C222T | C | T | 12 | 12 | AY.94 | 0.005312 |
noncoding | 222 | C222T | C | T | 12 | 12 | B.1.1.348 | 0.009554 |
noncoding | 222 | C222T | C | T | 12 | 12 | B.1.177.6 | 0.011719 |
noncoding | 222 | C222T | C | T | 12 | 12 | B.1.36.36 | 0.007225 |
noncoding | 222 | C222T | C | T | 12 | 12 | B.1.36.8 | 0.012 |
noncoding | 222 | C222T | C | T | 11 | 11 | A.2.5 | 0.005489 |
noncoding | 222 | C222- | C | - | 11 | 11 | AY.103 | 0.000068 |
noncoding | 222 | C222A | C | A | 11 | 11 | AY.118 | 0.000689 |
noncoding | 222 | C222- | C | - | 11 | 11 | AY.119 | 0.000388 |
noncoding | 222 | C222T | C | T | 11 | 11 | AY.2 | 0.003917 |
noncoding | 222 | C222T | C | T | 11 | 11 | AY.80 | 0.012415 |
noncoding | 222 | C222T | C | T | 11 | 11 | B.1.1.16 | 0.611111 |
noncoding | 222 | C222T | C | T | 11 | 11 | B.1.1.63 | 0.004244 |
noncoding | 222 | C222T | C | T | 11 | 11 | B.1.177.55 | 0.025641 |
noncoding | 222 | C222T | C | T | 11 | 11 | B.1.336 | 0.026829 |
noncoding | 222 | C222T | C | T | 11 | 11 | B.1.420 | 0.114583 |
noncoding | 222 | C222- | C | - | 11 | 11 | B.1.429 | 0.000259 |
noncoding | 222 | C222T | C | T | 11 | 11 | B.1.438.1 | 0.00118 |
noncoding | 222 | C222T | C | T | 11 | 11 | P.1.15 | 0.002556 |
noncoding | 222 | C222T | C | T | 10 | 10 | AY.117 | 0.000845 |
noncoding | 222 | C222T | C | T | 10 | 10 | AY.9.2 | 0.000367 |
noncoding | 222 | C222T | C | T | 10 | 10 | AY.98 | 0.00079 |
noncoding | 222 | C222T | C | T | 10 | 10 | B | 0.001278 |
noncoding | 222 | C222T | C | T | 10 | 10 | B.1.160.20 | 0.089286 |
noncoding | 222 | C222- | C | - | 10 | 10 | B.1.177 | 0.000132 |
noncoding | 222 | C222- | C | - | 9 | 9 | AY.23 | 0.000628 |
noncoding | 222 | C222- | C | - | 9 | 9 | AY.3 | 0.00009 |
noncoding | 222 | C222- | C | - | 9 | 9 | B.1 | 0.000082 |
noncoding | 222 | C222T | C | T | 9 | 9 | B.1.177.31 | 0.103448 |
noncoding | 222 | C222T | C | T | 9 | 9 | B.1.499 | 0.009454 |
noncoding | 222 | C222T | C | T | 9 | 9 | B.1.525 | 0.001018 |
noncoding | 222 | C222T | C | T | 9 | 9 | B.1.617.1 | 0.001161 |
noncoding | 222 | C222T | C | T | 9 | 9 | P.1.14 | 0.00043 |
noncoding | 222 | C222T | C | T | 8 | 8 | AY.27 | 0.000518 |
noncoding | 222 | C222G | C | G | 8 | 8 | AY.4 | 0.000012 |
noncoding | 222 | C222T | C | T | 8 | 8 | B.1.1.318 | 0.002414 |
noncoding | 222 | C222T | C | T | 8 | 8 | B.1.160.32 | 0.034335 |
noncoding | 222 | C222T | C | T | 8 | 8 | B.1.177.60 | 0.001747 |
noncoding | 222 | C222T | C | T | 8 | 8 | B.1.214.2 | 0.004796 |
noncoding | 222 | C222- | C | - | 8 | 8 | B.1.258 | 0.000532 |
noncoding | 222 | C222T | C | T | 8 | 8 | B.1.428 | 0.008163 |
noncoding | 222 | C222T | C | T | 7 | 7 | AY.39.1 | 0.000277 |
noncoding | 222 | C222T | C | T | 7 | 7 | AY.4.2.1 | 0.001043 |
noncoding | 222 | C222T | C | T | 7 | 7 | AY.46.6 | 0.000505 |
noncoding | 222 | C222T | C | T | 7 | 7 | AY.61 | 0.000733 |
noncoding | 222 | C222T | C | T | 7 | 7 | B.1.1.275 | 0.078652 |
noncoding | 222 | C222T | C | T | 7 | 7 | B.1.1.33 | 0.002946 |
noncoding | 222 | C222T | C | T | 7 | 7 | B.1.1.434 | 0.00244 |
noncoding | 222 | C222T | C | T | 7 | 7 | B.1.1.526 | 0.024823 |
noncoding | 222 | C222T | C | T | 7 | 7 | B.1.177.54 | 0.004245 |
noncoding | 222 | C222T | C | T | 7 | 7 | B.1.177.73 | 0.003964 |
noncoding | 222 | C222T | C | T | 7 | 7 | B.1.177.81 | 0.001325 |
noncoding | 222 | C222T | C | T | 7 | 7 | B.1.177.9 | 0.009321 |
noncoding | 222 | C222T | C | T | 7 | 7 | B.1.311 | 0.001922 |
noncoding | 222 | C222T | C | T | 7 | 7 | B.1.416.1 | 0.010937 |
noncoding | 222 | C222T | C | T | 7 | 7 | C.36.3 | 0.003971 |
noncoding | 222 | C222T | C | T | 6 | 6 | AY.106 | 0.002009 |
noncoding | 222 | C222- | C | - | 6 | 6 | AY.113 | 0.000854 |
noncoding | 222 | C222T | C | T | 6 | 6 | AY.114 | 0.001387 |
noncoding | 222 | C222T | C | T | 6 | 6 | AY.118 | 0.000376 |
noncoding | 222 | C222T | C | T | 6 | 6 | AY.23 | 0.000418 |
noncoding | 222 | C222T | C | T | 6 | 6 | AY.29.1 | 0.001323 |
noncoding | 222 | C222- | C | - | 6 | 6 | AY.33 | 0.000401 |
noncoding | 222 | C222T | C | T | 6 | 6 | AY.77 | 0.006764 |
noncoding | 222 | C222T | C | T | 6 | 6 | AY.98.1 | 0.000291 |
noncoding | 222 | C222T | C | T | 6 | 6 | B.1.1.1 | 0.00196 |
noncoding | 222 | C222T | C | T | 6 | 6 | B.1.1.294 | 0.007595 |
noncoding | 222 | C222T | C | T | 6 | 6 | B.1.1.372 | 0.004132 |
noncoding | 222 | C222T | C | T | 6 | 6 | B.1.1.485 | 0.1 |
noncoding | 222 | C222T | C | T | 6 | 6 | B.1.177.8 | 0.004515 |
noncoding | 222 | C222T | C | T | 6 | 6 | B.1.36.18 | 0.002521 |
noncoding | 222 | C222T | C | T | 6 | 6 | B.1.369 | 0.001711 |
noncoding | 222 | C222- | C | - | 6 | 6 | B.1.526 | 0.000141 |
noncoding | 222 | C222T | C | T | 6 | 6 | B.1.628 | 0.002114 |
noncoding | 222 | C222T | C | T | 6 | 6 | C.35 | 0.004644 |
noncoding | 222 | C222T | C | T | 5 | 5 | AD.2 | 0.001095 |
noncoding | 222 | C222- | C | - | 5 | 5 | AY.26 | 0.000142 |
noncoding | 222 | C222- | C | - | 5 | 5 | AY.47 | 0.000156 |
noncoding | 222 | C222T | C | T | 5 | 5 | AY.62 | 0.002179 |
noncoding | 222 | C222T | C | T | 5 | 5 | AY.71 | 0.002375 |
noncoding | 222 | C222T | C | T | 5 | 5 | B.1.1.153 | 0.005476 |
noncoding | 222 | C222T | C | T | 5 | 5 | B.1.1.220 | 0.009294 |
noncoding | 222 | C222T | C | T | 5 | 5 | B.1.1.288 | 0.009579 |
noncoding | 222 | C222T | C | T | 5 | 5 | B.1.1.397 | 0.011261 |
noncoding | 222 | C222T | C | T | 5 | 5 | B.1.160.14 | 0.010593 |
noncoding | 222 | C222T | C | T | 5 | 5 | B.1.177.86 | 0.000917 |
noncoding | 222 | C222- | C | - | 5 | 5 | B.1.206 | 0.004078 |
noncoding | 222 | C222T | C | T | 5 | 5 | B.1.221.1 | 0.014535 |
noncoding | 222 | C222T | C | T | 5 | 5 | B.1.404 | 0.00651 |
noncoding | 222 | C222T | C | T | 5 | 5 | B.1.470 | 0.007022 |
noncoding | 222 | C222T | C | T | 5 | 5 | B.6 | 0.00455 |
noncoding | 222 | C222T | C | T | 5 | 5 | P.1.17 | 0.000809 |
noncoding | 222 | C222- | C | - | 4 | 4 | AY.100 | 0.000184 |
noncoding | 222 | C222T | C | T | 4 | 4 | AY.110 | 0.000451 |
noncoding | 222 | C222- | C | - | 4 | 4 | AY.14 | 0.000352 |
noncoding | 222 | C222A | C | A | 4 | 4 | AY.25 | 0.000024 |
noncoding | 222 | C222T | C | T | 4 | 4 | AY.37 | 0.001264 |
noncoding | 222 | C222A | C | A | 4 | 4 | AY.4 | 0.000006 |
noncoding | 222 | C222- | C | - | 4 | 4 | AY.46.4 | 0.000658 |
noncoding | 222 | C222T | C | T | 4 | 4 | AY.54 | 0.000381 |
noncoding | 222 | C222T | C | T | 4 | 4 | AY.84 | 0.00175 |
noncoding | 222 | C222T | C | T | 4 | 4 | AY.90 | 0.002738 |
noncoding | 222 | C222T | C | T | 4 | 4 | AY.99.2 | 0.000369 |
noncoding | 222 | C222A | C | A | 4 | 4 | B.1 | 0.000037 |
noncoding | 222 | C222T | C | T | 4 | 4 | B.1.1.171 | 0.014706 |
noncoding | 222 | C222T | C | T | 4 | 4 | B.1.1.174 | 0.013514 |
noncoding | 222 | C222T | C | T | 4 | 4 | B.1.1.198 | 0.005874 |
noncoding | 222 | C222T | C | T | 4 | 4 | B.1.1.280 | 0.012346 |
noncoding | 222 | C222T | C | T | 4 | 4 | B.1.1.311 | 0.001433 |
noncoding | 222 | C222- | C | - | 4 | 4 | B.1.1.33 | 0.001684 |
noncoding | 222 | C222- | C | - | 4 | 4 | B.1.1.348 | 0.003185 |
noncoding | 222 | C222T | C | T | 4 | 4 | B.1.1.375 | 0.047619 |
noncoding | 222 | C222T | C | T | 4 | 4 | B.1.110.3 | 0.002874 |
noncoding | 222 | C222T | C | T | 4 | 4 | B.1.111 | 0.0047 |
noncoding | 222 | C222T | C | T | 4 | 4 | B.1.177.28 | 0.02963 |
noncoding | 222 | C222T | C | T | 4 | 4 | B.1.428.3 | 0.051282 |
noncoding | 222 | C222T | C | T | 4 | 4 | B.1.478 | 0.047059 |
noncoding | 222 | C222T | C | T | 4 | 4 | B.1.524 | 0.005626 |
noncoding | 222 | C222T | C | T | 4 | 4 | B.1.576 | 0.003626 |
noncoding | 222 | C222T | C | T | 4 | 4 | D.2 | 0.0003 |
noncoding | 222 | C222- | C | - | 4 | 4 | N.5 | 0.007067 |
noncoding | 222 | C222T | C | T | 4 | 4 | P.1.2 | 0.004624 |
noncoding | 222 | C222T | C | T | 3 | 3 | A | 0.001161 |
noncoding | 222 | C222T | C | T | 3 | 3 | A.21 | 0.00831 |
noncoding | 222 | C222T | C | T | 3 | 3 | AY.12 | 0.000948 |
noncoding | 222 | C222T | C | T | 3 | 3 | AY.3.1 | 0.000256 |
noncoding | 222 | C222- | C | - | 3 | 3 | AY.34.1 | 0.00153 |
noncoding | 222 | C222- | C | - | 3 | 3 | AY.39 | 0.000074 |
noncoding | 222 | C222T | C | T | 3 | 3 | AY.4.4 | 0.001227 |
noncoding | 222 | C222T | C | T | 3 | 3 | AY.59 | 0.001589 |
noncoding | 222 | C222T | C | T | 3 | 3 | AY.67 | 0.001393 |
noncoding | 222 | C222T | C | T | 3 | 3 | AY.89 | 0.014706 |
noncoding | 222 | C222T | C | T | 3 | 3 | B.1.1.160 | 0.071429 |
noncoding | 222 | C222T | C | T | 3 | 3 | B.1.1.304 | 0.008427 |
noncoding | 222 | C222T | C | T | 3 | 3 | B.1.1.316 | 0.002775 |
noncoding | 222 | C222T | C | T | 3 | 3 | B.1.1.37 | 0.000579 |
noncoding | 222 | C222T | C | T | 3 | 3 | B.1.160.15 | 0.014851 |
noncoding | 222 | C222T | C | T | 3 | 3 | B.1.177.4 | 0.000633 |
noncoding | 222 | C222T | C | T | 3 | 3 | B.1.36.19 | 0.027778 |
noncoding | 222 | C222T | C | T | 3 | 3 | B.1.362 | 0.004622 |
noncoding | 222 | C222T | C | T | 3 | 3 | B.1.375 | 0.002459 |
noncoding | 222 | C222- | C | - | 3 | 3 | B.1.422 | 0.002437 |
noncoding | 222 | C222T | C | T | 3 | 3 | B.1.433 | 0.009585 |
noncoding | 222 | C222T | C | T | 3 | 3 | B.1.465 | 0.011407 |
noncoding | 222 | C222T | C | T | 3 | 3 | B.1.466.2 | 0.001174 |
noncoding | 222 | C222T | C | T | 3 | 3 | B.1.509 | 0.002597 |
noncoding | 222 | C222T | C | T | 3 | 3 | B.1.533 | 0.028846 |
noncoding | 222 | C222T | C | T | 3 | 3 | B.1.595 | 0.000783 |
noncoding | 222 | C222- | C | - | 3 | 3 | B.1.595 | 0.000783 |
noncoding | 222 | C222A | C | A | 3 | 3 | B.1.617.2 | 0.000011 |
noncoding | 222 | C222T | C | T | 3 | 3 | B.29 | 0.010526 |
noncoding | 222 | C222T | C | T | 2 | 2 | AU.1 | 0.002532 |
noncoding | 222 | C222T | C | T | 2 | 2 | AY.1 | 0.000791 |
noncoding | 222 | C222T | C | T | 2 | 2 | AY.101 | 0.000981 |
noncoding | 222 | C222T | C | T | 2 | 2 | AY.105 | 0.001286 |
noncoding | 222 | C222T | C | T | 2 | 2 | AY.111 | 0.000366 |
noncoding | 222 | C222T | C | T | 2 | 2 | AY.116 | 0.000574 |
noncoding | 222 | C222T | C | T | 2 | 2 | AY.116.1 | 0.000623 |
noncoding | 222 | C222- | C | - | 2 | 2 | AY.118 | 0.000125 |
noncoding | 222 | C222- | C | - | 2 | 2 | AY.12 | 0.000632 |
noncoding | 222 | C222- | C | - | 2 | 2 | AY.20 | 0.000078 |
noncoding | 222 | C222T | C | T | 2 | 2 | AY.23.1 | 0.000835 |
noncoding | 222 | C222T | C | T | 2 | 2 | AY.30 | 0.000791 |
noncoding | 222 | C222T | C | T | 2 | 2 | AY.32 | 0.001065 |
noncoding | 222 | C222- | C | - | 2 | 2 | AY.4.2 | 0.000043 |
noncoding | 222 | C222T | C | T | 2 | 2 | AY.4.3 | 0.001684 |
noncoding | 222 | C222- | C | - | 2 | 2 | AY.4.4 | 0.000818 |
noncoding | 222 | C222T | C | T | 2 | 2 | AY.4.5 | 0.000215 |
noncoding | 222 | C222- | C | - | 2 | 2 | AY.45 | 0.000243 |
noncoding | 222 | C222T | C | T | 2 | 2 | AY.46.3 | 0.001867 |
noncoding | 222 | C222T | C | T | 2 | 2 | AY.46.4 | 0.000329 |
noncoding | 222 | C222T | C | T | 2 | 2 | AY.5.3 | 0.000675 |
noncoding | 222 | C222- | C | - | 2 | 2 | AY.54 | 0.000191 |
noncoding | 222 | C222T | C | T | 2 | 2 | AY.65 | 0.001066 |
noncoding | 222 | C222T | C | T | 2 | 2 | AY.68 | 0.000547 |
noncoding | 222 | C222- | C | - | 2 | 2 | AY.68 | 0.000547 |
noncoding | 222 | C222- | C | - | 2 | 2 | AY.73 | 0.001331 |
noncoding | 222 | C222T | C | T | 2 | 2 | AY.74 | 0.000231 |
noncoding | 222 | C222- | C | - | 2 | 2 | AY.9.1 | 0.000167 |
noncoding | 222 | C222- | C | - | 2 | 2 | AY.98.1 | 0.000097 |
noncoding | 222 | C222G | C | G | 2 | 2 | B.1 | 0.000018 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.1.125 | 0.020408 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.1.158 | 0.02439 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.1.186 | 0.006873 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.1.236 | 0.013793 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.1.261 | 0.017241 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.1.277 | 0.001517 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.1.322 | 0.017544 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.1.329 | 0.007692 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.1.351 | 0.005587 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.1.369 | 0.000892 |
noncoding | 222 | C222- | C | - | 2 | 2 | B.1.1.37 | 0.000386 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.1.374 | 0.004751 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.1.409 | 0.005666 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.1.46 | 0.008734 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.1.462 | 0.017241 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.1.50 | 0.001358 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.1.54 | 0.006042 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.126 | 0.002551 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.147 | 0.001512 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.160.10 | 0.016129 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.160.33 | 0.00885 |
noncoding | 222 | C222- | C | - | 2 | 2 | B.1.177.18 | 0.00232 |
noncoding | 222 | C222- | C | - | 2 | 2 | B.1.177.21 | 0.000153 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.177.23 | 0.006472 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.177.52 | 0.003515 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.177.62 | 0.002384 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.177.65 | 0.001331 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.177.7 | 0.00033 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.177.77 | 0.001452 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.177.82 | 0.000955 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.206 | 0.001631 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.210 | 0.004264 |
noncoding | 222 | C222- | C | - | 2 | 2 | B.1.221 | 0.000142 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.239 | 0.002442 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.240 | 0.000431 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.260 | 0.006689 |
noncoding | 222 | C222- | C | - | 2 | 2 | B.1.3 | 0.005236 |
noncoding | 222 | C222- | C | - | 2 | 2 | B.1.311 | 0.000549 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.320 | 0.002491 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.349 | 0.00143 |
noncoding | 222 | C222- | C | - | 2 | 2 | B.1.36 | 0.000292 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.36.17 | 0.000988 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.36.22 | 0.002415 |
noncoding | 222 | C222- | C | - | 2 | 2 | B.1.36.29 | 0.001035 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.396 | 0.001411 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.399 | 0.003868 |
noncoding | 222 | C222- | C | - | 2 | 2 | B.1.404 | 0.002604 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.407 | 0.071429 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.456 | 0.006536 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.460 | 0.035714 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.466.1 | 0.014388 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.497 | 0.00063 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.530 | 0.014286 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.564 | 0.000852 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.580 | 0.00813 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.582 | 0.000981 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.1.637 | 0.000146 |
noncoding | 222 | C222- | C | - | 2 | 2 | B.1.637 | 0.000146 |
noncoding | 222 | C222T | C | T | 2 | 2 | B.10 | 0.016529 |
noncoding | 222 | C222T | C | T | 2 | 2 | N.5 | 0.003534 |
noncoding | 222 | C222- | C | - | 2 | 2 | N.6 | 0.014184 |
noncoding | 222 | C222- | C | - | 2 | 2 | P.1.14 | 0.000096 |
noncoding | 222 | C222- | C | - | 2 | 2 | P.2 | 0.000373 |
noncoding | 222 | C222T | C | T | 2 | 2 | Q.1 | 0.000253 |
noncoding | 222 | C222- | C | - | 2 | 2 | Z.1 | 0.00578 |
noncoding | 222 | C222A | C | A | 1 | 1 | A | 0.000387 |
noncoding | 222 | C222- | C | - | 1 | 1 | A.1 | 0.000282 |
noncoding | 222 | C222T | C | T | 1 | 1 | A.2 | 0.000662 |
noncoding | 222 | C222- | C | - | 1 | 1 | A.2.2 | 0.001689 |
noncoding | 222 | C222T | C | T | 1 | 1 | A.2.2 | 0.001689 |
noncoding | 222 | C222T | C | T | 1 | 1 | A.23.1 | 0.000704 |
noncoding | 222 | C222T | C | T | 1 | 1 | AB.1 | 0.008197 |
noncoding | 222 | C222- | C | - | 1 | 1 | AE.8 | 0.000489 |
noncoding | 222 | C222T | C | T | 1 | 1 | AL.1 | 0.012987 |
noncoding | 222 | C222T | C | T | 1 | 1 | AN.1 | 0.02 |
noncoding | 222 | C222T | C | T | 1 | 1 | AY.10 | 0.00053 |
noncoding | 222 | C222T | C | T | 1 | 1 | AY.108 | 0.001103 |
noncoding | 222 | C222T | C | T | 1 | 1 | AY.11 | 0.001339 |
noncoding | 222 | C222- | C | - | 1 | 1 | AY.116 | 0.000287 |
noncoding | 222 | C222- | C | - | 1 | 1 | AY.116.1 | 0.000311 |
noncoding | 222 | C222- | C | - | 1 | 1 | AY.117 | 0.000085 |
noncoding | 222 | C222A | C | A | 1 | 1 | AY.120 | 0.000037 |
noncoding | 222 | C222- | C | - | 1 | 1 | AY.120 | 0.000037 |
noncoding | 222 | C222T | C | T | 1 | 1 | AY.120.2 | 0.001285 |
noncoding | 222 | C222T | C | T | 1 | 1 | AY.121 | 0.000135 |
noncoding | 222 | C222G | C | G | 1 | 1 | AY.121 | 0.000135 |
noncoding | 222 | C222T | C | T | 1 | 1 | AY.14 | 0.000088 |
noncoding | 222 | C222T | C | T | 1 | 1 | AY.16.1 | 0.00047 |
noncoding | 222 | C222A | C | A | 1 | 1 | AY.26 | 0.000028 |
noncoding | 222 | C222T | C | T | 1 | 1 | AY.28 | 0.00189 |
noncoding | 222 | C222G | C | G | 1 | 1 | AY.29 | 0.000016 |
noncoding | 222 | C222- | C | - | 1 | 1 | AY.3.1 | 0.000085 |
noncoding | 222 | C222A | C | A | 1 | 1 | AY.33 | 0.000067 |
noncoding | 222 | C222T | C | T | 1 | 1 | AY.34 | 0.000097 |
noncoding | 222 | C222T | C | T | 1 | 1 | AY.35 | 0.000233 |
noncoding | 222 | C222- | C | - | 1 | 1 | AY.38 | 0.000499 |
noncoding | 222 | C222- | C | - | 1 | 1 | AY.39.1 | 0.00004 |
noncoding | 222 | C222T | C | T | 1 | 1 | AY.39.2 | 0.001541 |
noncoding | 222 | C222- | C | - | 1 | 1 | AY.4.2.1 | 0.000149 |
noncoding | 222 | C222T | C | T | 1 | 1 | AY.40 | 0.000964 |
noncoding | 222 | C222- | C | - | 1 | 1 | AY.41 | 0.000294 |
noncoding | 222 | C222A | C | A | 1 | 1 | AY.42 | 0.00004 |
noncoding | 222 | C222A | C | A | 1 | 1 | AY.43 | 0.000004 |
noncoding | 222 | C222A | C | A | 1 | 1 | AY.44 | 0.000006 |
noncoding | 222 | C222G | C | G | 1 | 1 | AY.44 | 0.000006 |
noncoding | 222 | C222- | C | - | 1 | 1 | AY.46 | 0.000104 |
noncoding | 222 | C222- | C | - | 1 | 1 | AY.46.3 | 0.000934 |
noncoding | 222 | C222- | C | - | 1 | 1 | AY.46.5 | 0.000198 |
noncoding | 222 | C222T | C | T | 1 | 1 | AY.49 | 0.003195 |
noncoding | 222 | C222- | C | - | 1 | 1 | AY.5 | 0.000021 |
noncoding | 222 | C222T | C | T | 1 | 1 | AY.5.4 | 0.000277 |
noncoding | 222 | C222A | C | A | 1 | 1 | AY.52 | 0.000814 |
noncoding | 222 | C222T | C | T | 1 | 1 | AY.57 | 0.000656 |
noncoding | 222 | C222- | C | - | 1 | 1 | AY.59 | 0.00053 |
noncoding | 222 | C222- | C | - | 1 | 1 | AY.6 | 0.000041 |
noncoding | 222 | C222- | C | - | 1 | 1 | AY.60 | 0.000938 |
noncoding | 222 | C222T | C | T | 1 | 1 | AY.63 | 0.000387 |
noncoding | 222 | C222A | C | A | 1 | 1 | AY.68 | 0.000274 |
noncoding | 222 | C222A | C | A | 1 | 1 | AY.7.2 | 0.000559 |
noncoding | 222 | C222T | C | T | 1 | 1 | AY.70 | 0.000209 |
noncoding | 222 | C222- | C | - | 1 | 1 | AY.75.1 | 0.00018 |
noncoding | 222 | C222T | C | T | 1 | 1 | AY.78 | 0.001541 |
noncoding | 222 | C222T | C | T | 1 | 1 | AY.79 | 0.001211 |
noncoding | 222 | C222T | C | T | 1 | 1 | AY.8 | 0.000606 |
noncoding | 222 | C222A | C | A | 1 | 1 | AY.88 | 0.000884 |
noncoding | 222 | C222A | C | A | 1 | 1 | AY.9 | 0.000068 |
noncoding | 222 | C222- | C | - | 1 | 1 | AY.9 | 0.000068 |
noncoding | 222 | C222T | C | T | 1 | 1 | AY.91 | 0.00073 |
noncoding | 222 | C222- | C | - | 1 | 1 | AY.94 | 0.000443 |
noncoding | 222 | C222T | C | T | 1 | 1 | AY.95 | 0.000761 |
noncoding | 222 | C222- | C | - | 1 | 1 | AY.95 | 0.000761 |
noncoding | 222 | C222A | C | A | 1 | 1 | AY.99 | 0.001049 |
noncoding | 222 | C222A | C | A | 1 | 1 | AY.99.2 | 0.000092 |
noncoding | 222 | C222- | C | - | 1 | 1 | AY.99.2 | 0.000092 |
noncoding | 222 | C222A | C | A | 1 | 1 | B | 0.000128 |
noncoding | 222 | C222- | C | - | 1 | 1 | B.1.1.1 | 0.000327 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.1.10 | 0.001115 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.1.121 | 0.002427 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.1.157 | 0.000913 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.1.170 | 0.001247 |
noncoding | 222 | C222- | C | - | 1 | 1 | B.1.1.170 | 0.001247 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.1.175 | 0.076923 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.1.176 | 0.000439 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.1.189 | 0.001513 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.1.221 | 0.010101 |
noncoding | 222 | C222- | C | - | 1 | 1 | B.1.1.222 | 0.000204 |
noncoding | 222 | C222- | C | - | 1 | 1 | B.1.1.232 | 0.001815 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.1.237 | 0.005405 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.1.241 | 0.00207 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.1.255 | 0.00303 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.1.267 | 0.010101 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.1.269 | 0.001353 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.1.3 | 0.008696 |
noncoding | 222 | C222G | C | G | 1 | 1 | B.1.1.301 | 0.001179 |
noncoding | 222 | C222- | C | - | 1 | 1 | B.1.1.306 | 0.000438 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.1.307 | 0.002532 |
noncoding | 222 | C222- | C | - | 1 | 1 | B.1.1.311 | 0.000358 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.1.312 | 0.001912 |
noncoding | 222 | C222- | C | - | 1 | 1 | B.1.1.322 | 0.008772 |
noncoding | 222 | C222- | C | - | 1 | 1 | B.1.1.353 | 0.020833 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.1.356 | 0.008547 |
noncoding | 222 | C222A | C | A | 1 | 1 | B.1.1.376 | 0.005952 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.1.386 | 0.066667 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.1.387 | 0.058824 |
noncoding | 222 | C222- | C | - | 1 | 1 | B.1.1.409 | 0.002833 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.1.416 | 0.000905 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.1.420 | 0.001006 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.1.424 | 0.045455 |
noncoding | 222 | C222- | C | - | 1 | 1 | B.1.1.44 | 0.00241 |
noncoding | 222 | C222- | C | - | 1 | 1 | B.1.1.448 | 0.002033 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.1.461 | 0.012048 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.1.464 | 0.001473 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.1.47 | 0.005348 |
noncoding | 222 | C222- | C | - | 1 | 1 | B.1.1.50 | 0.000679 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.1.507 | 0.008696 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.1.514 | 0.038462 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.1.515 | 0.02 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.1.521 | 0.005348 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.1.523 | 0.001563 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.1.55 | 0.012987 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.1.99 | 0.02381 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.124 | 0.007812 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.149 | 0.003425 |
noncoding | 222 | C222A | C | A | 1 | 1 | B.1.160 | 0.000031 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.160.21 | 0.020408 |
noncoding | 222 | C222- | C | - | 1 | 1 | B.1.160.23 | 0.004831 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.160.9 | 0.007194 |
noncoding | 222 | C222- | C | - | 1 | 1 | B.1.164 | 0.014925 |
noncoding | 222 | C222- | C | - | 1 | 1 | B.1.170 | 0.00431 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.177.16 | 0.000664 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.177.17 | 0.000821 |
noncoding | 222 | C222- | C | - | 1 | 1 | B.1.177.44 | 0.000519 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.177.45 | 0.000381 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.177.50 | 0.004695 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.177.53 | 0.002392 |
noncoding | 222 | C222- | C | - | 1 | 1 | B.1.177.57 | 0.000281 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.177.57 | 0.000281 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.177.58 | 0.001332 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.177.79 | 0.002342 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.189 | 0.004292 |
noncoding | 222 | C222A | C | A | 1 | 1 | B.1.2 | 0.000009 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.232 | 0.000537 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.233 | 0.014085 |
noncoding | 222 | C222- | C | - | 1 | 1 | B.1.234 | 0.000132 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.241 | 0.000812 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.258.14 | 0.00098 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.279 | 0.000514 |
noncoding | 222 | C222G | C | G | 1 | 1 | B.1.279 | 0.000514 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.3 | 0.002618 |
noncoding | 222 | C222A | C | A | 1 | 1 | B.1.301 | 0.005917 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.314 | 0.007519 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.333 | 0.010526 |
noncoding | 222 | C222- | C | - | 1 | 1 | B.1.351 | 0.00003 |
noncoding | 222 | C222- | C | - | 1 | 1 | B.1.351.2 | 0.000303 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.354 | 0.043478 |
noncoding | 222 | C222G | C | G | 1 | 1 | B.1.36 | 0.000146 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.36.10 | 0.004785 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.36.16 | 0.001425 |
noncoding | 222 | C222- | C | - | 1 | 1 | B.1.36.18 | 0.00042 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.36.25 | 0.002208 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.361 | 0.001289 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.371 | 0.001122 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.391 | 0.001127 |
noncoding | 222 | C222- | C | - | 1 | 1 | B.1.396 | 0.000706 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.400 | 0.000429 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.405 | 0.012346 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.408 | 0.00369 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.411 | 0.003704 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.415 | 0.014286 |
noncoding | 222 | C222- | C | - | 1 | 1 | B.1.416 | 0.001269 |
noncoding | 222 | C222- | C | - | 1 | 1 | B.1.420 | 0.010417 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.422 | 0.000812 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.435 | 0.011364 |
noncoding | 222 | C222- | C | - | 1 | 1 | B.1.438.1 | 0.000107 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.462 | 0.007246 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.468 | 0.005714 |
noncoding | 222 | C222- | C | - | 1 | 1 | B.1.470 | 0.001404 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.473 | 0.019231 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.480 | 0.002488 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.498 | 0.020408 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.501 | 0.007353 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.520 | 0.021739 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.523 | 0.002451 |
noncoding | 222 | C222A | C | A | 1 | 1 | B.1.526 | 0.000024 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.537 | 0.02 |
noncoding | 222 | C222G | C | G | 1 | 1 | B.1.538 | 0.008065 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.540 | 0.009709 |
noncoding | 222 | C222- | C | - | 1 | 1 | B.1.541 | 0.004425 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.549 | 0.007194 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.551 | 0.00129 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.558 | 0.004566 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.563 | 0.016949 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.572 | 0.025 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.581 | 0.009434 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.588 | 0.00091 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.597 | 0.00463 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.599 | 0.00365 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.610 | 0.003546 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.612 | 0.002653 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.616 | 0.02439 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.620 | 0.000946 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.621.1 | 0.000506 |
noncoding | 222 | C222A | C | A | 1 | 1 | B.1.623 | 0.000536 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.625 | 0.002353 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.627 | 0.00202 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.9 | 0.006173 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.1.93 | 0.000934 |
noncoding | 222 | C222- | C | - | 1 | 1 | B.3 | 0.000831 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.4.1 | 0.018868 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.40 | 0.000364 |
noncoding | 222 | C222A | C | A | 1 | 1 | B.6 | 0.00091 |
noncoding | 222 | C222T | C | T | 1 | 1 | B.6.6 | 0.000889 |
noncoding | 222 | C222T | C | T | 1 | 1 | C.1 | 0.002392 |
noncoding | 222 | C222- | C | - | 1 | 1 | C.1 | 0.002392 |
noncoding | 222 | C222T | C | T | 1 | 1 | C.23 | 0.005814 |
noncoding | 222 | C222- | C | - | 1 | 1 | C.35 | 0.000774 |
noncoding | 222 | C222T | C | T | 1 | 1 | C.36.3.1 | 0.002717 |
noncoding | 222 | C222A | C | A | 1 | 1 | C.37 | 0.000116 |
noncoding | 222 | C222T | C | T | 1 | 1 | C.40 | 0.027778 |
noncoding | 222 | C222A | C | A | 1 | 1 | D.2 | 0.000075 |
noncoding | 222 | C222T | C | T | 1 | 1 | N.4 | 0.004255 |
noncoding | 222 | C222- | C | - | 1 | 1 | N.4 | 0.004255 |
noncoding | 222 | C222T | C | T | 1 | 1 | P.1.10 | 0.000269 |
noncoding | 222 | C222T | C | T | 1 | 1 | P.1.10.1 | 0.00813 |
noncoding | 222 | C222- | C | - | 1 | 1 | P.1.12 | 0.000484 |
noncoding | 222 | C222T | C | T | 1 | 1 | P.1.13 | 0.000898 |
noncoding | 222 | C222A | C | A | 1 | 1 | P.1.14 | 0.000048 |
noncoding | 222 | C222- | C | - | 1 | 1 | P.1.16 | 0.000374 |
noncoding | 222 | C222T | C | T | 1 | 1 | P.1.16 | 0.000374 |
noncoding | 222 | C222T | C | T | 1 | 1 | Q.7 | 0.001111 |
noncoding | 222 | C222T | C | T | 1 | 1 | W.4 | 0.001351 |
noncoding | 222 | C222T | C | T | 1 | 1 | Z.1 | 0.00289 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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