CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = noncoding : CodonNum = 19

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
noncoding19C19TnoncodingCT49444944119-19
noncoding19C19GnoncodingCG17181718119-19
noncoding19C19AnoncodingCA847847119-19
noncoding19C19-noncodingC-363363119-19
noncoding19C19VnoncodingCV1818119-19
noncoding19C19RnoncodingCR66119-19
noncoding19C19BnoncodingCB33119-19
noncoding19C19KnoncodingCK11119-19

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
noncoding19C19TCT49444944All0.000946
noncoding19C19TCT29162916B.1.1.70.00261
noncoding19C19GCG17181718All0.000329
noncoding19C19GCG10731073B.1.1.70.000961
noncoding19C19TCT10611061B.1.619.10.680564
noncoding19C19ACA847847All0.000162
noncoding19C19-C-363363All0.000069
noncoding19C19ACA285285B.1.1.70.000255
noncoding19C19ACA220220AY.430.000975
noncoding19C19-C-160160B.1.1.70.000143
noncoding19C19TCT129129Q.10.016296
noncoding19C19TCT112112B.1.3510.003329
noncoding19C19ACA9191B.10.000834
noncoding19C19TCT5959B.1.258.170.006134
noncoding19C19GCG5858AY.430.000257
noncoding19C19TCT5353B.1.177.600.011577
noncoding19C19TCT4949B.1.10.000889
noncoding19C19ACA4747AY.9.20.001726
noncoding19C19GCG4646B.1.3510.001367
noncoding19C19TCT4343B.1.20.000379
noncoding19C19GCG4343Q.10.005432
noncoding19C19GCG4141B.10.000376
noncoding19C19ACA4141B.1.617.20.000154
noncoding19C19GCG3838B.1.20.000335
noncoding19C19TCT3232P.10.000504
noncoding19C19TCT2727B.1.2580.001797
noncoding19C19TCT2323B.10.000211
noncoding19C19ACA2323Q.10.002906
noncoding19C19TCT2222B.1.1770.00029
noncoding19C19GCG2222B.1.177.600.004806
noncoding19C19GCG2121B.1.10.000381
noncoding19C19TCT2121B.1.1.4530.177966
noncoding19C19TCT2121B.1.1.5190.000834
noncoding19C19GCG2121B.1.258.170.002183
noncoding19C19TCT2020AY.430.000089
noncoding19C19VCV1818All0.000003
noncoding19C19GCG1818B.1.1.2910.013363
noncoding19C19TCT1818B.1.2210.001279
noncoding19C19GCG1717B.1.1690.253731
noncoding19C19GCG1717B.1.2580.001131
noncoding19C19TCT1717B.1.617.20.000064
noncoding19C19-C-1616B.1.617.20.00006
noncoding19C19GCG1515B.1.617.20.000056
noncoding19C19GCG1414B.1.1600.000437
noncoding19C19TCT1414B.1.1600.000437
noncoding19C19TCT1313B.1.1.3740.030879
noncoding19C19ACA1313B.1.258.170.001352
noncoding19C19-C-1212AY.300.004749
noncoding19C19ACA1212B.1.20.000106
noncoding19C19TCT1212U.30.046332
noncoding19C19-C-1111B.10.000101
noncoding19C19GCG1111B.1.1770.000145
noncoding19C19TCT1111B.1.177.810.002083
noncoding19C19GCG1111B.1.2210.000781
noncoding19C19GCG1010B.1.2400.002156
noncoding19C19GCG1010B.1.3330.105263
noncoding19C19TCT1010B.1.4290.000235
noncoding19C19GCG1010B.1.4460.2
noncoding19C19GCG99A.10.002537
noncoding19C19ACA99AY.980.000711
noncoding19C19-C-88B.1.1.3060.003507
noncoding19C19-C-88B.1.2100.017058
noncoding19C19TCT88B.1.6190.006969
noncoding19C19-C-77AY.430.000031
noncoding19C19TCT77B.1.177.790.016393
noncoding19C19GCG77B.1.177.810.001325
noncoding19C19GCG77B.1.3240.011236
noncoding19C19TCT77B.1.5250.000792
noncoding19C19RCR66All0.000001
noncoding19C19-C-66B.1.10.000109
noncoding19C19ACA66B.1.10.000109
noncoding19C19GCG66B.1.1.1920.013857
noncoding19C19-C-66B.1.1.460.026201
noncoding19C19TCT66B.1.1.700.002046
noncoding19C19ACA66B.1.1770.000079
noncoding19C19TCT66B.1.177.460.00551
noncoding19C19ACA66B.1.177.600.001311
noncoding19C19-C-66B.1.20.000053
noncoding19C19GCG66B.1.2430.000418
noncoding19C19ACA66B.1.3510.000178
noncoding19C19GCG66B.1.3710.006734
noncoding19C19-C-55AY.1030.000031
noncoding19C19TCT55AY.250.00003
noncoding19C19GCG55AY.30.00005
noncoding19C19TCT55AY.40.000008
noncoding19C19GCG55AY.440.00003
noncoding19C19TCT55AY.680.001369
noncoding19C19TCT55AY.690.000933
noncoding19C19-C-55AY.850.002136
noncoding19C19VCV55B.10.000046
noncoding19C19TCT55B.1.177.860.000917
noncoding19C19-C-55B.1.258.170.00052
noncoding19C19TCT55B.1.4270.000252
noncoding19C19GCG55B.1.4270.000252
noncoding19C19TCT55B.1.6200.00473
noncoding19C19GCG55P.10.000079
noncoding19C19TCT55P.1.140.000239
noncoding19C19TCT440.222222
noncoding19C19TCT44AY.1020.000106
noncoding19C19ACA44AY.300.001583
noncoding19C19TCT44AY.300.001583
noncoding19C19TCT44B.1.1.1890.006051
noncoding19C19GCG44B.1.1.2510.031746
noncoding19C19-C-44B.1.1.270.022599
noncoding19C19TCT44B.1.1.280.001245
noncoding19C19-C-44B.1.1.330.001684
noncoding19C19GCG44B.1.1.5190.000159
noncoding19C19GCG44B.1.1390.002933
noncoding19C19-C-44B.1.1770.000053
noncoding19C19VCV44B.1.20.000035
noncoding19C19ACA44B.1.2580.000266
noncoding19C19TCT44B.1.36.180.001681
noncoding19C19GCG44B.1.6210.000354
noncoding19C19TCT44C.36.30.002269
noncoding19C19TCT44P.1.10.001271
noncoding19C19TCT44P.20.000747
noncoding19C19-C-44Q.10.000505
noncoding19C19BCB33All0.000001
noncoding19C19TCT33AY.1030.000019
noncoding19C19GCG33AY.250.000018
noncoding19C19GCG33AY.300.001187
noncoding19C19-C-33AY.40.000005
noncoding19C19TCT33AY.440.000018
noncoding19C19TCT33AY.50.000062
noncoding19C19GCG33AY.850.001282
noncoding19C19GCG33B0.000383
noncoding19C19GCG33B.1.1.10.00098
noncoding19C19TCT33B.1.1.1410.006036
noncoding19C19GCG33B.1.1.280.000934
noncoding19C19-C-33B.1.1.280.000934
noncoding19C19TCT33B.1.1.2940.003797
noncoding19C19GCG33B.1.1.3170.001235
noncoding19C19TCT33B.1.1.330.001263
noncoding19C19GCG33B.1.1.520.036585
noncoding19C19ACA33B.1.1.700.001023
noncoding19C19TCT33B.1.177.570.000843
noncoding19C19TCT33B.1.177.820.001432
noncoding19C19TCT33B.1.177.830.004444
noncoding19C19GCG33B.1.177.860.00055
noncoding19C19GCG33B.1.3410.068182
noncoding19C19-C-33B.1.3510.000089
noncoding19C19TCT33B.1.36.160.004274
noncoding19C19TCT33B.1.5260.000071
noncoding19C19GCG33B.1.5750.00091
noncoding19C19GCG33B.1.5950.000783
noncoding19C19-C-33B.1.619.10.001924
noncoding19C19-C-33C.370.000348
noncoding19C19-C-33P.10.000047
noncoding19C19TCT33Q.40.001364
noncoding19C19TCT22A0.000774
noncoding19C19VCV22A.10.000564
noncoding19C19-C-22AU.20.004843
noncoding19C19GCG22AY.1030.000012
noncoding19C19-C-22AY.120.10.000642
noncoding19C19-C-22AY.30.00002
noncoding19C19ACA22AY.30.00002
noncoding19C19-C-22AY.390.000049
noncoding19C19ACA22AY.390.000049
noncoding19C19-C-22AY.420.00008
noncoding19C19-C-22AY.470.000062
noncoding19C19ACA22AY.710.00095
noncoding19C19TCT22AY.790.002421
noncoding19C19ACA22AY.850.000854
noncoding19C19TCT22AY.9.20.000073
noncoding19C19-C-22AY.9.20.000073
noncoding19C19TCT22AY.98.10.000097
noncoding19C19GCG22B.1.1.1410.004024
noncoding19C19TCT22B.1.1.2430.008163
noncoding19C19ACA22B.1.1.270.011299
noncoding19C19TCT22B.1.1.2840.000215
noncoding19C19GCG22B.1.1.300.153846
noncoding19C19TCT22B.1.1.3060.000877
noncoding19C19GCG22B.1.1.3060.000877
noncoding19C19TCT22B.1.1.3170.000823
noncoding19C19ACA22B.1.1.3170.000823
noncoding19C19TCT22B.1.1.3180.000604
noncoding19C19ACA22B.1.1.3190.035088
noncoding19C19-C-22B.1.1.3540.008772
noncoding19C19TCT22B.1.1.370.000386
noncoding19C19GCG22B.1.1.370.000386
noncoding19C19ACA22B.1.1.3740.004751
noncoding19C19TCT22B.1.1.390.001019
noncoding19C19TCT22B.1.1.3970.004505
noncoding19C19GCG22B.1.1.4290.009217
noncoding19C19TCT22B.1.1.460.008734
noncoding19C19-C-22B.1.1.700.000682
noncoding19C19-C-22B.1.1100.00905
noncoding19C19TCT22B.1.110.30.001437
noncoding19C19GCG22B.1.1260.002551
noncoding19C19ACA22B.1.1600.000062
noncoding19C19-C-22B.1.1600.000062
noncoding19C19TCT22B.1.177.160.001329
noncoding19C19TCT22B.1.177.410.005
noncoding19C19-C-22B.1.177.600.000437
noncoding19C19GCG22B.1.177.620.002384
noncoding19C19TCT22B.1.177.620.002384
noncoding19C19ACA22B.1.177.730.001133
noncoding19C19GCG22B.1.177.790.004684
noncoding19C19-C-22B.1.177.860.000367
noncoding19C19ACA22B.1.2210.000142
noncoding19C19GCG22B.1.2340.000264
noncoding19C19TCT22B.1.2430.000139
noncoding19C19-C-22B.1.2580.000133
noncoding19C19TCT22B.1.36.80.002
noncoding19C19GCG22B.1.3990.003868
noncoding19C19ACA22B.1.4270.000101
noncoding19C19GCG22B.1.4290.000047
noncoding19C19GCG22B.1.5250.000226
noncoding19C19TCT22B.1.5400.019417
noncoding19C19GCG22B.1.5650.001621
noncoding19C19GCG22B.1.5940.0625
noncoding19C19TCT22B.1.5960.000174
noncoding19C19-C-22B.1.6200.001892
noncoding19C19ACA22B.1.6210.000177
noncoding19C19TCT22B.40.004415
noncoding19C19-C-22C.260.014706
noncoding19C19TCT22C.350.001548
noncoding19C19GCG22C.350.001548
noncoding19C19TCT22C.360.001821
noncoding19C19GCG22P.20.000373
noncoding19C19GCG22Q.40.00091
noncoding19C19ACA22Q.40.00091
noncoding19C19TCT22R.10.00018
noncoding19C19GCG22R.10.00018
noncoding19C19TCT22S.10.009901
noncoding19C19GCG22U.30.007722
noncoding19C19ACA22U.30.007722
noncoding19C19GCG11A0.000387
noncoding19C19TCT11A.270.001656
noncoding19C19TCT11AD.20.000219
noncoding19C19-C-11AE.20.058824
noncoding19C19-C-11AE.40.043478
noncoding19C19KCK11All0
noncoding19C19TCT11AY.10.000396
noncoding19C19GCG11AY.100.00053
noncoding19C19-C-11AY.1020.000027
noncoding19C19GCG11AY.1020.000027
noncoding19C19ACA11AY.1030.000006
noncoding19C19ACA11AY.1060.000335
noncoding19C19-C-11AY.1060.000335
noncoding19C19-C-11AY.1080.001103
noncoding19C19GCG11AY.1110.000183
noncoding19C19-C-11AY.1130.000142
noncoding19C19ACA11AY.1130.000142
noncoding19C19TCT11AY.1170.000085
noncoding19C19-C-11AY.1170.000085
noncoding19C19ACA11AY.1170.000085
noncoding19C19GCG11AY.1170.000085
noncoding19C19ACA11AY.1180.000063
noncoding19C19-C-11AY.200.000039
noncoding19C19RCR11AY.200.000039
noncoding19C19GCG11AY.200.000039
noncoding19C19TCT11AY.230.00007
noncoding19C19TCT11AY.260.000028
noncoding19C19TCT11AY.30.00001
noncoding19C19-C-11AY.3.10.000085
noncoding19C19ACA11AY.3.10.000085
noncoding19C19TCT11AY.3.10.000085
noncoding19C19KCK11AY.300.000396
noncoding19C19RCR11AY.300.000396
noncoding19C19-C-11AY.330.000067
noncoding19C19TCT11AY.340.000097
noncoding19C19-C-11AY.340.000097
noncoding19C19GCG11AY.340.000097
noncoding19C19TCT11AY.390.000025
noncoding19C19TCT11AY.4.2.10.000149
noncoding19C19TCT11AY.4.40.000409
noncoding19C19GCG11AY.4.50.000107
noncoding19C19-C-11AY.4.50.000107
noncoding19C19TCT11AY.420.00004
noncoding19C19-C-11AY.440.000006
noncoding19C19GCG11AY.460.000104
noncoding19C19ACA11AY.540.000095
noncoding19C19TCT11AY.590.00053
noncoding19C19GCG11AY.590.00053
noncoding19C19-C-11AY.60.000041
noncoding19C19TCT11AY.7.20.000559
noncoding19C19-C-11AY.700.000209
noncoding19C19TCT11AY.710.000475
noncoding19C19TCT11AY.750.000056
noncoding19C19GCG11AY.75.10.00018
noncoding19C19ACA11AY.940.000443
noncoding19C19-C-11AY.98.10.000048
noncoding19C19TCT11AY.990.001049
noncoding19C19TCT11AY.99.20.000092
noncoding19C19GCG11AZ.20.000821
noncoding19C19TCT11AZ.20.000821
noncoding19C19-C-11AZ.50.003509
noncoding19C19TCT11AZ.50.003509
noncoding19C19TCT11B0.000128
noncoding19C19ACA11B0.000128
noncoding19C19BCB11B.10.000009
noncoding19C19GCG11B.1.1.1390.022727
noncoding19C19ACA11B.1.1.1410.002012
noncoding19C19TCT11B.1.1.1530.001095
noncoding19C19ACA11B.1.1.1590.004673
noncoding19C19GCG11B.1.1.1620.029412
noncoding19C19ACA11B.1.1.1700.001247
noncoding19C19GCG11B.1.1.1870.00885
noncoding19C19ACA11B.1.1.1890.001513
noncoding19C19TCT11B.1.1.1920.002309
noncoding19C19ACA11B.1.1.1920.002309
noncoding19C19TCT11B.1.1.2020.076923
noncoding19C19GCG11B.1.1.2040.00304
noncoding19C19-C-11B.1.1.2160.00089
noncoding19C19GCG11B.1.1.2180.007692
noncoding19C19GCG11B.1.1.2190.005
noncoding19C19TCT11B.1.1.2190.005
noncoding19C19GCG11B.1.1.2220.000204
noncoding19C19GCG11B.1.1.2280.003049
noncoding19C19GCG11B.1.1.2310.003096
noncoding19C19TCT11B.1.1.2320.001815
noncoding19C19TCT11B.1.1.2340.012048
noncoding19C19GCG11B.1.1.2430.004082
noncoding19C19GCG11B.1.1.260.005236
noncoding19C19ACA11B.1.1.280.000311
noncoding19C19TCT11B.1.1.2820.011628
noncoding19C19VCV11B.1.1.2910.000742
noncoding19C19-C-11B.1.1.2910.000742
noncoding19C19ACA11B.1.1.2910.000742
noncoding19C19GCG11B.1.1.3010.001179
noncoding19C19ACA11B.1.1.3180.000302
noncoding19C19TCT11B.1.1.3190.017544
noncoding19C19TCT11B.1.1.3260.001761
noncoding19C19GCG11B.1.1.330.000421
noncoding19C19GCG11B.1.1.390.00051
noncoding19C19ACA11B.1.1.3970.002252
noncoding19C19GCG11B.1.1.4320.001266
noncoding19C19GCG11B.1.1.460.004367
noncoding19C19GCG11B.1.1.4640.001473
noncoding19C19TCT11B.1.1.4860.001577
noncoding19C19TCT11B.1.1.500.000679
noncoding19C19GCG11B.1.1.5230.001563
noncoding19C19GCG11B.1.1.5280.004808
noncoding19C19TCT11B.1.1.580.005376
noncoding19C19RCR11B.1.1.70.000001
noncoding19C19VCV11B.1.1.80.003584
noncoding19C19GCG11B.1.1.980.018519
noncoding19C19ACA11B.1.1110.001175
noncoding19C19RCR11B.1.1280.000635
noncoding19C19-C-11B.1.1490.003425
noncoding19C19GCG11B.1.160.160.000929
noncoding19C19GCG11B.1.1700.00431
noncoding19C19ACA11B.1.177.150.000631
noncoding19C19TCT11B.1.177.210.000076
noncoding19C19GCG11B.1.177.350.000691
noncoding19C19TCT11B.1.177.350.000691
noncoding19C19GCG11B.1.177.410.0025
noncoding19C19-C-11B.1.177.510.004566
noncoding19C19ACA11B.1.177.530.002392
noncoding19C19GCG11B.1.177.750.001041
noncoding19C19-C-11B.1.177.770.000726
noncoding19C19-C-11B.1.177.810.000189
noncoding19C19GCG11B.1.177.820.000477
noncoding19C19GCG11B.1.2060.000816
noncoding19C19TCT11B.1.214.20.0006
noncoding19C19GCG11B.1.214.20.0006
noncoding19C19TCT11B.1.221.40.004167
noncoding19C19TCT11B.1.2340.000132
noncoding19C19ACA11B.1.2340.000132
noncoding19C19VCV11B.1.2400.000216
noncoding19C19TCT11B.1.2400.000216
noncoding19C19ACA11B.1.2400.000216
noncoding19C19BCB11B.1.2430.00007
noncoding19C19VCV11B.1.2430.00007
noncoding19C19-C-11B.1.2430.00007
noncoding19C19TCT11B.1.258.140.00098
noncoding19C19TCT11B.1.258.30.001675
noncoding19C19ACA11B.1.2980.002114
noncoding19C19GCG11B.1.3010.005917
noncoding19C19ACA11B.1.3060.005714
noncoding19C19RCR11B.1.3110.000275
noncoding19C19GCG11B.1.3110.000275
noncoding19C19-C-11B.1.3200.001245
noncoding19C19RCR11B.1.3240.001605
noncoding19C19ACA11B.1.3240.001605
noncoding19C19GCG11B.1.3490.000715
noncoding19C19TCT11B.1.351.20.000303
noncoding19C19GCG11B.1.360.000146
noncoding19C19TCT11B.1.360.000146
noncoding19C19GCG11B.1.36.10.00114
noncoding19C19ACA11B.1.36.160.001425
noncoding19C19-C-11B.1.36.190.009259
noncoding19C19TCT11B.1.36.310.001751
noncoding19C19-C-11B.1.36.310.001751
noncoding19C19TCT11B.1.36.350.002604
noncoding19C19GCG11B.1.36.80.001
noncoding19C19GCG11B.1.3670.000792
noncoding19C19TCT11B.1.3690.000285
noncoding19C19VCV11B.1.3690.000285
noncoding19C19ACA11B.1.3710.001122
noncoding19C19VCV11B.1.3710.001122
noncoding19C19GCG11B.1.3960.000706
noncoding19C19ACA11B.1.4000.000429
noncoding19C19VCV11B.1.4020.009804
noncoding19C19GCG11B.1.4090.000781
noncoding19C19ACA11B.1.4160.001269
noncoding19C19GCG11B.1.4160.001269
noncoding19C19GCG11B.1.4260.001009
noncoding19C19-C-11B.1.4270.00005
noncoding19C19BCB11B.1.4270.00005
noncoding19C19-C-11B.1.4290.000024
noncoding19C19ACA11B.1.4290.000024
noncoding19C19-C-11B.1.4460.02
noncoding19C19TCT11B.1.466.20.000391
noncoding19C19GCG11B.1.4930.025641
noncoding19C19TCT11B.1.4970.000315
noncoding19C19GCG11B.1.5000.052632
noncoding19C19TCT11B.1.5090.000866
noncoding19C19GCG11B.1.5170.000427
noncoding19C19GCG11B.1.5240.001406
noncoding19C19ACA11B.1.5240.001406
noncoding19C19-C-11B.1.5250.000113
noncoding19C19ACA11B.1.5250.000113
noncoding19C19GCG11B.1.5260.000024
noncoding19C19ACA11B.1.5270.003704
noncoding19C19GCG11B.1.5440.006024
noncoding19C19GCG11B.1.5610.000397
noncoding19C19TCT11B.1.5650.00081
noncoding19C19TCT11B.1.5680.001111
noncoding19C19TCT11B.1.5760.000907
noncoding19C19TCT11B.1.5770.000687
noncoding19C19GCG11B.1.5770.000687
noncoding19C19-C-11B.1.5950.000261
noncoding19C19-C-11B.1.5960.000087
noncoding19C19GCG11B.1.617.10.000129
noncoding19C19TCT11B.1.6180.004032
noncoding19C19GCG11B.1.6190.000871
noncoding19C19-C-11B.1.6210.000089
noncoding19C19-C-11B.1.6230.000536
noncoding19C19TCT11B.1.6360.006711
noncoding19C19ACA11B.1.6370.000073
noncoding19C19GCG11B.1.9.40.006135
noncoding19C19GCG11B.40.002208
noncoding19C19-C-11B.4.40.018868
noncoding19C19GCG11B.4.40.018868
noncoding19C19TCT11B.4.80.071429
noncoding19C19-C-11B.60.00091
noncoding19C19TCT11B.6.60.000889
noncoding19C19ACA11C.260.007353
noncoding19C19GCG11C.360.000911
noncoding19C19GCG11C.36.30.000567
noncoding19C19TCT11C.370.000116
noncoding19C19ACA11D.20.000075
noncoding19C19GCG11N.10.016949
noncoding19C19TCT11N.90.005952
noncoding19C19ACA11P.10.000016
noncoding19C19-C-11P.1.10.000318
noncoding19C19ACA11P.1.10.000318
noncoding19C19TCT11P.1.120.000484
noncoding19C19-C-11P.1.120.000484
noncoding19C19GCG11P.1.140.000048
noncoding19C19TCT11P.1.170.000162
noncoding19C19GCG11P.1.170.000162
noncoding19C19-C-11P.20.000187
noncoding19C19ACA11P.20.000187
noncoding19C19-C-11Q.40.000455
noncoding19C19-C-11U.30.003861
noncoding19C19TCT11Z.10.00289
noncoding19C19ACA11Z.10.00289