CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = noncoding : CodonNum = 187

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
noncoding187A187GnoncodingAG159115911187-187
noncoding187A187TnoncodingAT2852851187-187
noncoding187A187-noncodingA-1941941187-187
noncoding187A187CnoncodingAC15151187-187

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
noncoding187A187GAG15911591All0.000304
noncoding187A187GAG13131313B.10.012026
noncoding187A187TAT285285All0.000055
noncoding187A187-A-194194All0.000037
noncoding187A187TAT178178B.1.1.70.000159
noncoding187A187GAG4343B.1.20.000379
noncoding187A187-A-4242B.1.1.70.000038
noncoding187A187GAG2626B.1.1420.075362
noncoding187A187GAG1919B.1.1.70.000017
noncoding187A187GAG1919B.1.940.513514
noncoding187A187-A-1717AY.40.000026
noncoding187A187GAG1616AY.250.000096
noncoding187A187CAC1515All0.000003
noncoding187A187GAG1414B.1.1981
noncoding187A187TAT1212B.1.617.20.000045
noncoding187A187GAG1111AY.1030.000068
noncoding187A187GAG1111AY.40.000017
noncoding187A187TAT1111B.1.20.000097
noncoding187A187TAT1010AY.40.000016
noncoding187A187-A-1010AY.430.000044
noncoding187A187-A-99AY.230.000628
noncoding187A187TAT99B.1.617.10.001161
noncoding187A187-A-88B.1.1770.000105
noncoding187A187GAG88B.1.5960.000697
noncoding187A187GAG77AY.390.000173
noncoding187A187GAG77AY.4.20.000152
noncoding187A187GAG77B.1.10.000127
noncoding187A187GAG77B.1.1600.000218
noncoding187A187-A-66AY.30.00006
noncoding187A187TAT66AY.390.000148
noncoding187A187TAT66AY.460.000624
noncoding187A187TAT66B.1.1.4850.1
noncoding187A187GAG55AY.440.00003
noncoding187A187GAG55AY.50.000103
noncoding187A187GAG55B.1.617.20.000019
noncoding187A187-A-55B.1.617.20.000019
noncoding187A187-A-44AY.250.000024
noncoding187A187GAG44AY.430.000018
noncoding187A187-A-44AY.9.10.000335
noncoding187A187TAT44AY.98.10.000194
noncoding187A187-A-44B.1.1.330.001684
noncoding187A187-A-44B.1.1.3480.003185
noncoding187A187-A-44B.1.20.000035
noncoding187A187GAG44B.1.2430.000278
noncoding187A187GAG44B.1.5950.001044
noncoding187A187TAT44B.1.6270.008081
noncoding187A187-A-33AY.200.000117
noncoding187A187-A-33AY.240.001293
noncoding187A187-A-33AY.330.0002
noncoding187A187TAT33AY.440.000018
noncoding187A187GAG33B0.000383
noncoding187A187CAC33B.1.1.70.000003
noncoding187A187GAG33B.1.4330.009585
noncoding187A187GAG33B.1.5820.001472
noncoding187A187TAT22AY.1030.000012
noncoding187A187-A-22AY.120.000632
noncoding187A187CAC22AY.160.000759
noncoding187A187TAT22AY.200.000078
noncoding187A187TAT22AY.260.000057
noncoding187A187-A-22AY.34.10.00102
noncoding187A187-A-22AY.4.20.000043
noncoding187A187-A-22AY.4.40.000818
noncoding187A187-A-22AY.450.000243
noncoding187A187GAG22AY.460.000208
noncoding187A187TAT22AY.750.000112
noncoding187A187CAC22AY.98.10.000097
noncoding187A187-A-22B.10.000018
noncoding187A187TAT22B.1.1.2970.004474
noncoding187A187GAG22B.1.1.330.000842
noncoding187A187TAT22B.1.1.4320.002532
noncoding187A187TAT22B.1.2340.000264
noncoding187A187GAG22B.1.3910.002255
noncoding187A187TAT22B.1.5950.000522
noncoding187A187-A-22B.1.5960.000174
noncoding187A187CAC22B.1.617.20.000008
noncoding187A187GAG22B.6.60.001778
noncoding187A187-A-22N.60.014184
noncoding187A187-A-22P.10.000032
noncoding187A187-A-22P.1.140.000096
noncoding187A187-A-22P.20.000373
noncoding187A187-A-11A.10.000282
noncoding187A187-A-11AE.80.000489
noncoding187A187GAG11AY.10.000396
noncoding187A187GAG11AY.1010.00049
noncoding187A187-A-11AY.1020.000027
noncoding187A187-A-11AY.1030.000006
noncoding187A187-A-11AY.1160.000287
noncoding187A187GAG11AY.1180.000063
noncoding187A187GAG11AY.1210.000135
noncoding187A187TAT11AY.130.000161
noncoding187A187TAT11AY.230.00007
noncoding187A187CAC11AY.230.00007
noncoding187A187TAT11AY.250.000006
noncoding187A187GAG11AY.260.000028
noncoding187A187TAT11AY.290.000016
noncoding187A187TAT11AY.30.00001
noncoding187A187GAG11AY.330.000067
noncoding187A187TAT11AY.330.000067
noncoding187A187TAT11AY.360.000148
noncoding187A187-A-11AY.380.000499
noncoding187A187-A-11AY.390.000025
noncoding187A187GAG11AY.39.10.00004
noncoding187A187TAT11AY.4.20.000022
noncoding187A187-A-11AY.4.50.000107
noncoding187A187-A-11AY.410.000294
noncoding187A187GAG11AY.420.00004
noncoding187A187TAT11AY.430.000004
noncoding187A187-A-11AY.440.000006
noncoding187A187GAG11AY.450.000122
noncoding187A187-A-11AY.460.000104
noncoding187A187-A-11AY.46.40.000165
noncoding187A187GAG11AY.46.40.000165
noncoding187A187GAG11AY.530.000288
noncoding187A187TAT11AY.540.000095
noncoding187A187GAG11AY.540.000095
noncoding187A187-A-11AY.590.00053
noncoding187A187TAT11AY.590.00053
noncoding187A187-A-11AY.60.000041
noncoding187A187-A-11AY.600.000938
noncoding187A187GAG11AY.610.000105
noncoding187A187-A-11AY.680.000274
noncoding187A187TAT11AY.690.000187
noncoding187A187-A-11AY.75.10.00018
noncoding187A187-A-11AY.90.000068
noncoding187A187CAC11AY.9.20.000037
noncoding187A187-A-11AY.940.000443
noncoding187A187-A-11AY.950.000761
noncoding187A187-A-11AY.98.10.000048
noncoding187A187TAT11B.10.000009
noncoding187A187CAC11B.1.10.000018
noncoding187A187TAT11B.1.10.000018
noncoding187A187-A-11B.1.1.1390.022727
noncoding187A187-A-11B.1.1.1700.001247
noncoding187A187TAT11B.1.1.1940.00495
noncoding187A187-A-11B.1.1.2320.001815
noncoding187A187-A-11B.1.1.2690.001353
noncoding187A187-A-11B.1.1.3220.008772
noncoding187A187-A-11B.1.1.4090.002833
noncoding187A187GAG11B.1.1.4170.002703
noncoding187A187-A-11B.1.1.440.00241
noncoding187A187GAG11B.1.110.30.000718
noncoding187A187GAG11B.1.1180.006711
noncoding187A187GAG11B.1.1430.021277
noncoding187A187CAC11B.1.1600.000031
noncoding187A187-A-11B.1.1600.000031
noncoding187A187GAG11B.1.160.220.006757
noncoding187A187-A-11B.1.160.230.004831
noncoding187A187TAT11B.1.177.170.000821
noncoding187A187-A-11B.1.177.180.00116
noncoding187A187-A-11B.1.177.210.000076
noncoding187A187-A-11B.1.177.40.000211
noncoding187A187-A-11B.1.177.620.001192
noncoding187A187GAG11B.1.177.80.000752
noncoding187A187GAG11B.1.1900.01
noncoding187A187GAG11B.1.1990.004132
noncoding187A187GAG11B.1.2230.002778
noncoding187A187-A-11B.1.2430.00007
noncoding187A187GAG11B.1.2520.006623
noncoding187A187-A-11B.1.2580.000067
noncoding187A187TAT11B.1.258.170.000104
noncoding187A187GAG11B.1.2640.012346
noncoding187A187GAG11B.1.3010.005917
noncoding187A187GAG11B.1.3260.007576
noncoding187A187GAG11B.1.3330.010526
noncoding187A187GAG11B.1.3400.004292
noncoding187A187TAT11B.1.3510.00003
noncoding187A187-A-11B.1.360.000146
noncoding187A187GAG11B.1.3630.012987
noncoding187A187-A-11B.1.4160.001269
noncoding187A187-A-11B.1.4290.000024
noncoding187A187GAG11B.1.4290.000024
noncoding187A187GAG11B.1.5210.004975
noncoding187A187TAT11B.1.5250.000113
noncoding187A187CAC11B.1.5260.000024
noncoding187A187GAG11B.1.5260.000024
noncoding187A187-A-11B.1.5730.006098
noncoding187A187GAG11B.1.5760.000907
noncoding187A187GAG11B.1.617.30.002985
noncoding187A187GAG11B.1.780.008547
noncoding187A187-A-11B.100.008264
noncoding187A187GAG11B.40.002208
noncoding187A187GAG11C.110.010638
noncoding187A187-A-11C.350.000774
noncoding187A187CAC11C.370.000116
noncoding187A187TAT11C.40.01
noncoding187A187-A-11D.20.000075
noncoding187A187-A-11N.40.004255
noncoding187A187GAG11P.10.000016
noncoding187A187GAG11P.1.140.000048
noncoding187A187-A-11Q.70.001111
noncoding187A187-A-11Q.80.000165