CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
S | 789 | Y789Y | syn | taC | taT | 10022 | 10022 | 1 | 23927-23929 |
Details of the mutation Y789Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
S | 789 | Y789Y | taC | taT | 10022 | 10022 | All | 0.001917 |
S | 789 | Y789Y | taC | taT | 1192 | 1192 | B.1.351 | 0.035434 |
S | 789 | Y789Y | taC | taT | 1145 | 1145 | B.1.1.7 | 0.001025 |
S | 789 | Y789Y | taC | taT | 1092 | 1092 | B.6.6 | 0.970667 |
S | 789 | Y789Y | taC | taT | 1011 | 1011 | B.6 | 0.919927 |
S | 789 | Y789Y | taC | taT | 731 | 731 | AY.4 | 0.001138 |
S | 789 | Y789Y | taC | taT | 539 | 539 | AY.43 | 0.002388 |
S | 789 | Y789Y | taC | taT | 438 | 438 | B.1.637 | 0.032006 |
S | 789 | Y789Y | taC | taT | 261 | 261 | B.1.617.2 | 0.000983 |
S | 789 | Y789Y | taC | taT | 223 | 223 | AY.103 | 0.001385 |
S | 789 | Y789Y | taC | taT | 201 | 201 | AY.4.2 | 0.004359 |
S | 789 | Y789Y | taC | taT | 175 | 175 | B.1.2 | 0.001541 |
S | 789 | Y789Y | taC | taT | 143 | 143 | AY.75 | 0.008011 |
S | 789 | Y789Y | taC | taT | 135 | 135 | B.1.177 | 0.001778 |
S | 789 | Y789Y | taC | taT | 130 | 130 | AY.29 | 0.002051 |
S | 789 | Y789Y | taC | taT | 126 | 126 | AY.25 | 0.000758 |
S | 789 | Y789Y | taC | taT | 125 | 125 | AY.44 | 0.000761 |
S | 789 | Y789Y | taC | taT | 121 | 121 | B.6.8 | 1 |
S | 789 | Y789Y | taC | taT | 118 | 118 | B.1.1 | 0.002141 |
S | 789 | Y789Y | taC | taT | 93 | 93 | AY.3 | 0.000925 |
S | 789 | Y789Y | taC | taT | 82 | 82 | B.1 | 0.000751 |
S | 789 | Y789Y | taC | taT | 79 | 79 | AY.20 | 0.00307 |
S | 789 | Y789Y | taC | taT | 58 | 58 | P.1 | 0.000914 |
S | 789 | Y789Y | taC | taT | 55 | 55 | B.1.177.20 | 0.08346 |
S | 789 | Y789Y | taC | taT | 49 | 49 | B.1.429 | 0.001153 |
S | 789 | Y789Y | taC | taT | 45 | 45 | AY.5 | 0.000929 |
S | 789 | Y789Y | taC | taT | 44 | 44 | B.1.1.519 | 0.001747 |
S | 789 | Y789Y | taC | taT | 43 | 43 | B.1.1.214 | 0.002385 |
S | 789 | Y789Y | taC | taT | 43 | 43 | B.1.160.16 | 0.039963 |
S | 789 | Y789Y | taC | taT | 42 | 42 | B.1.160.18 | 0.306569 |
S | 789 | Y789Y | taC | taT | 41 | 41 | B.1.160 | 0.001279 |
S | 789 | Y789Y | taC | taT | 38 | 38 | B.6.1 | 1 |
S | 789 | Y789Y | taC | taT | 38 | 38 | B.6.3 | 1 |
S | 789 | Y789Y | taC | taT | 36 | 36 | AY.102 | 0.000955 |
S | 789 | Y789Y | taC | taT | 33 | 33 | C.36.3 | 0.018718 |
S | 789 | Y789Y | taC | taT | 32 | 32 | B.1.617.1 | 0.004127 |
S | 789 | Y789Y | taC | taT | 29 | 29 | AY.9.2 | 0.001065 |
S | 789 | Y789Y | taC | taT | 26 | 26 | B.1.258 | 0.00173 |
S | 789 | Y789Y | taC | taT | 25 | 25 | AY.106 | 0.008372 |
S | 789 | Y789Y | taC | taT | 25 | 25 | AY.34 | 0.002424 |
S | 789 | Y789Y | taC | taT | 25 | 25 | B.1.177.58 | 0.033289 |
S | 789 | Y789Y | taC | taT | 25 | 25 | C.1.2 | 0.106383 |
S | 789 | Y789Y | taC | taT | 24 | 24 | AY.13 | 0.003863 |
S | 789 | Y789Y | taC | taT | 24 | 24 | AY.39 | 0.000593 |
S | 789 | Y789Y | taC | taT | 23 | 23 | B.1.243 | 0.0016 |
S | 789 | Y789Y | taC | taT | 22 | 22 | B.6.4 | 1 |
S | 789 | Y789Y | taC | taT | 21 | 21 | B.1.1.135 | 0.098592 |
S | 789 | Y789Y | taC | taT | 21 | 21 | C.37 | 0.002437 |
S | 789 | Y789Y | taC | taT | 20 | 20 | B.1.36 | 0.002918 |
S | 789 | Y789Y | taC | taT | 18 | 18 | B.1.234 | 0.002375 |
S | 789 | Y789Y | taC | taT | 17 | 17 | B.1.1.400 | 0.85 |
S | 789 | Y789Y | taC | taT | 17 | 17 | B.1.427 | 0.000858 |
S | 789 | Y789Y | taC | taT | 16 | 16 | AY.120 | 0.000595 |
S | 789 | Y789Y | taC | taT | 16 | 16 | AY.6 | 0.000658 |
S | 789 | Y789Y | taC | taT | 16 | 16 | B.1.526 | 0.000376 |
S | 789 | Y789Y | taC | taT | 16 | 16 | B.6.2 | 1 |
S | 789 | Y789Y | taC | taT | 16 | 16 | C.16 | 0.016967 |
S | 789 | Y789Y | taC | taT | 15 | 15 | AY.26 | 0.000425 |
S | 789 | Y789Y | taC | taT | 15 | 15 | AY.33 | 0.001002 |
S | 789 | Y789Y | taC | taT | 15 | 15 | AY.73 | 0.00998 |
S | 789 | Y789Y | taC | taT | 14 | 14 | AY.110 | 0.001578 |
S | 789 | Y789Y | taC | taT | 14 | 14 | AY.23 | 0.000976 |
S | 789 | Y789Y | taC | taT | 14 | 14 | B.1.1.222 | 0.002856 |
S | 789 | Y789Y | taC | taT | 14 | 14 | B.1.525 | 0.001584 |
S | 789 | Y789Y | taC | taT | 13 | 13 | AY.119 | 0.000459 |
S | 789 | Y789Y | taC | taT | 13 | 13 | AY.9 | 0.000879 |
S | 789 | Y789Y | taC | taT | 12 | 12 | AY.47 | 0.000373 |
S | 789 | Y789Y | taC | taT | 12 | 12 | B.1.111 | 0.014101 |
S | 789 | Y789Y | taC | taT | 12 | 12 | B.1.146 | 0.050847 |
S | 789 | Y789Y | taC | taT | 12 | 12 | B.1.575 | 0.003641 |
S | 789 | Y789Y | taC | taT | 12 | 12 | B.6.5 | 0.923077 |
S | 789 | Y789Y | taC | taT | 11 | 11 | AY.27 | 0.000712 |
S | 789 | Y789Y | taC | taT | 11 | 11 | B.1.1.284 | 0.001181 |
S | 789 | Y789Y | taC | taT | 11 | 11 | B.1.621 | 0.000974 |
S | 789 | Y789Y | taC | taT | 11 | 11 | C.13 | 0.282051 |
S | 789 | Y789Y | taC | taT | 10 | 10 | AY.118 | 0.000626 |
S | 789 | Y789Y | taC | taT | 10 | 10 | B | 0.001278 |
S | 789 | Y789Y | taC | taT | 10 | 10 | B.1.157 | 0.029851 |
S | 789 | Y789Y | taC | taT | 9 | 9 | AY.100 | 0.000414 |
S | 789 | Y789Y | taC | taT | 9 | 9 | AY.3.1 | 0.000767 |
S | 789 | Y789Y | taC | taT | 9 | 9 | AY.46.6 | 0.00065 |
S | 789 | Y789Y | taC | taT | 9 | 9 | AY.59 | 0.004767 |
S | 789 | Y789Y | taC | taT | 9 | 9 | AY.99 | 0.009444 |
S | 789 | Y789Y | taC | taT | 9 | 9 | B.1.177.32 | 0.012146 |
S | 789 | Y789Y | taC | taT | 8 | 8 | AY.46.2 | 0.005083 |
S | 789 | Y789Y | taC | taT | 8 | 8 | AY.61 | 0.000838 |
S | 789 | Y789Y | taC | taT | 8 | 8 | AY.75.1 | 0.001442 |
S | 789 | Y789Y | taC | taT | 8 | 8 | B.1.1.306 | 0.003507 |
S | 789 | Y789Y | taC | taT | 8 | 8 | B.1.177.60 | 0.001747 |
S | 789 | Y789Y | taC | taT | 8 | 8 | B.1.214.2 | 0.004796 |
S | 789 | Y789Y | taC | taT | 7 | 7 | AY.120.1 | 0.002247 |
S | 789 | Y789Y | taC | taT | 7 | 7 | AY.45 | 0.000852 |
S | 789 | Y789Y | taC | taT | 7 | 7 | AY.65 | 0.003731 |
S | 789 | Y789Y | taC | taT | 7 | 7 | B.1.1.28 | 0.002179 |
S | 789 | Y789Y | taC | taT | 7 | 7 | B.1.160.30 | 0.020833 |
S | 789 | Y789Y | taC | taT | 7 | 7 | B.1.177.15 | 0.004416 |
S | 789 | Y789Y | taC | taT | 7 | 7 | B.1.177.81 | 0.001325 |
S | 789 | Y789Y | taC | taT | 7 | 7 | B.1.561 | 0.002779 |
S | 789 | Y789Y | taC | taT | 7 | 7 | P.1.14 | 0.000335 |
S | 789 | Y789Y | taC | taT | 6 | 6 | AD.2 | 0.001314 |
S | 789 | Y789Y | taC | taT | 6 | 6 | AY.42 | 0.000241 |
S | 789 | Y789Y | taC | taT | 6 | 6 | AY.46.5 | 0.00119 |
S | 789 | Y789Y | taC | taT | 6 | 6 | B.1.1.70 | 0.002046 |
S | 789 | Y789Y | taC | taT | 6 | 6 | B.1.536 | 0.142857 |
S | 789 | Y789Y | taC | taT | 6 | 6 | B.1.565 | 0.004862 |
S | 789 | Y789Y | taC | taT | 6 | 6 | D.2 | 0.00045 |
S | 789 | Y789Y | taC | taT | 5 | 5 | AY.1 | 0.001979 |
S | 789 | Y789Y | taC | taT | 5 | 5 | AY.116 | 0.001434 |
S | 789 | Y789Y | taC | taT | 5 | 5 | AY.46 | 0.00052 |
S | 789 | Y789Y | taC | taT | 5 | 5 | AY.93 | 0.001365 |
S | 789 | Y789Y | taC | taT | 5 | 5 | B.1.1.33 | 0.002104 |
S | 789 | Y789Y | taC | taT | 5 | 5 | B.1.1.416 | 0.004525 |
S | 789 | Y789Y | taC | taT | 5 | 5 | B.1.1.425 | 0.227273 |
S | 789 | Y789Y | taC | taT | 5 | 5 | B.1.177.12 | 0.000758 |
S | 789 | Y789Y | taC | taT | 5 | 5 | B.1.221 | 0.000355 |
S | 789 | Y789Y | taC | taT | 5 | 5 | B.1.258.17 | 0.00052 |
S | 789 | Y789Y | taC | taT | 5 | 5 | B.1.349 | 0.003574 |
S | 789 | Y789Y | taC | taT | 5 | 5 | B.1.468 | 0.028571 |
S | 789 | Y789Y | taC | taT | 5 | 5 | P.2 | 0.000933 |
S | 789 | Y789Y | taC | taT | 4 | 4 | A | 0.001548 |
S | 789 | Y789Y | taC | taT | 4 | 4 | AY.117 | 0.000338 |
S | 789 | Y789Y | taC | taT | 4 | 4 | AY.38 | 0.001997 |
S | 789 | Y789Y | taC | taT | 4 | 4 | AY.55 | 0.00367 |
S | 789 | Y789Y | taC | taT | 4 | 4 | AY.60 | 0.003752 |
S | 789 | Y789Y | taC | taT | 4 | 4 | B.1.159 | 0.04878 |
S | 789 | Y789Y | taC | taT | 4 | 4 | B.1.258.4 | 0.013793 |
S | 789 | Y789Y | taC | taT | 4 | 4 | B.1.428 | 0.004082 |
S | 789 | Y789Y | taC | taT | 4 | 4 | B.1.621.1 | 0.002023 |
S | 789 | Y789Y | taC | taT | 4 | 4 | B.3 | 0.003322 |
S | 789 | Y789Y | taC | taT | 4 | 4 | P.1.12 | 0.001936 |
S | 789 | Y789Y | taC | taT | 4 | 4 | P.1.16 | 0.001496 |
S | 789 | Y789Y | taC | taT | 3 | 3 | AY.108 | 0.003308 |
S | 789 | Y789Y | taC | taT | 3 | 3 | AY.12 | 0.000948 |
S | 789 | Y789Y | taC | taT | 3 | 3 | AY.29.1 | 0.000662 |
S | 789 | Y789Y | taC | taT | 3 | 3 | AY.32 | 0.001597 |
S | 789 | Y789Y | taC | taT | 3 | 3 | AY.35 | 0.000699 |
S | 789 | Y789Y | taC | taT | 3 | 3 | AY.36 | 0.000445 |
S | 789 | Y789Y | taC | taT | 3 | 3 | AY.70 | 0.000626 |
S | 789 | Y789Y | taC | taT | 3 | 3 | AY.79 | 0.003632 |
S | 789 | Y789Y | taC | taT | 3 | 3 | AY.98.1 | 0.000145 |
S | 789 | Y789Y | taC | taT | 3 | 3 | B.1.1.280 | 0.009259 |
S | 789 | Y789Y | taC | taT | 3 | 3 | B.1.1.348 | 0.002389 |
S | 789 | Y789Y | taC | taT | 3 | 3 | B.1.1.351 | 0.00838 |
S | 789 | Y789Y | taC | taT | 3 | 3 | B.1.1.50 | 0.002037 |
S | 789 | Y789Y | taC | taT | 3 | 3 | B.1.177.44 | 0.001557 |
S | 789 | Y789Y | taC | taT | 3 | 3 | B.1.177.7 | 0.000495 |
S | 789 | Y789Y | taC | taT | 3 | 3 | B.1.258.14 | 0.002941 |
S | 789 | Y789Y | taC | taT | 3 | 3 | B.1.305 | 0.006452 |
S | 789 | Y789Y | taC | taT | 3 | 3 | B.1.351.5 | 0.001799 |
S | 789 | Y789Y | taC | taT | 3 | 3 | B.1.369 | 0.000856 |
S | 789 | Y789Y | taC | taT | 3 | 3 | B.1.416.1 | 0.004687 |
S | 789 | Y789Y | taC | taT | 3 | 3 | B.1.517 | 0.001281 |
S | 789 | Y789Y | taC | taT | 3 | 3 | B.1.596 | 0.000261 |
S | 789 | Y789Y | taC | taT | 3 | 3 | C.36.3.1 | 0.008152 |
S | 789 | Y789Y | taC | taT | 3 | 3 | P.1.10 | 0.000808 |
S | 789 | Y789Y | taC | taT | 3 | 3 | P.1.17 | 0.000485 |
S | 789 | Y789Y | taC | taT | 3 | 3 | R.1 | 0.00027 |
S | 789 | Y789Y | taC | taT | 2 | 2 | 0.111111 | |
S | 789 | Y789Y | taC | taT | 2 | 2 | AY.109 | 0.001479 |
S | 789 | Y789Y | taC | taT | 2 | 2 | AY.114 | 0.000462 |
S | 789 | Y789Y | taC | taT | 2 | 2 | AY.121 | 0.000271 |
S | 789 | Y789Y | taC | taT | 2 | 2 | AY.16 | 0.000759 |
S | 789 | Y789Y | taC | taT | 2 | 2 | AY.16.1 | 0.00094 |
S | 789 | Y789Y | taC | taT | 2 | 2 | AY.24 | 0.000862 |
S | 789 | Y789Y | taC | taT | 2 | 2 | AY.37 | 0.000632 |
S | 789 | Y789Y | taC | taT | 2 | 2 | AY.4.2.1 | 0.000298 |
S | 789 | Y789Y | taC | taT | 2 | 2 | AY.40 | 0.001929 |
S | 789 | Y789Y | taC | taT | 2 | 2 | AY.5.3 | 0.000675 |
S | 789 | Y789Y | taC | taT | 2 | 2 | AY.69 | 0.000373 |
S | 789 | Y789Y | taC | taT | 2 | 2 | AY.71 | 0.00095 |
S | 789 | Y789Y | taC | taT | 2 | 2 | AY.74 | 0.000231 |
S | 789 | Y789Y | taC | taT | 2 | 2 | AY.82 | 0.002714 |
S | 789 | Y789Y | taC | taT | 2 | 2 | AY.91 | 0.001461 |
S | 789 | Y789Y | taC | taT | 2 | 2 | AY.99.2 | 0.000184 |
S | 789 | Y789Y | taC | taT | 2 | 2 | B.1.1.127 | 0.125 |
S | 789 | Y789Y | taC | taT | 2 | 2 | B.1.1.170 | 0.002494 |
S | 789 | Y789Y | taC | taT | 2 | 2 | B.1.1.189 | 0.003026 |
S | 789 | Y789Y | taC | taT | 2 | 2 | B.1.1.298 | 0.001724 |
S | 789 | Y789Y | taC | taT | 2 | 2 | B.1.1.305 | 0.007722 |
S | 789 | Y789Y | taC | taT | 2 | 2 | B.1.1.317 | 0.000823 |
S | 789 | Y789Y | taC | taT | 2 | 2 | B.1.1.318 | 0.000604 |
S | 789 | Y789Y | taC | taT | 2 | 2 | B.1.1.347 | 0.036364 |
S | 789 | Y789Y | taC | taT | 2 | 2 | B.1.1.389 | 0.012121 |
S | 789 | Y789Y | taC | taT | 2 | 2 | B.1.177.17 | 0.001642 |
S | 789 | Y789Y | taC | taT | 2 | 2 | B.1.210 | 0.004264 |
S | 789 | Y789Y | taC | taT | 2 | 2 | B.1.22 | 0.002635 |
S | 789 | Y789Y | taC | taT | 2 | 2 | B.1.260 | 0.006689 |
S | 789 | Y789Y | taC | taT | 2 | 2 | B.1.267 | 0.037037 |
S | 789 | Y789Y | taC | taT | 2 | 2 | B.1.306 | 0.011429 |
S | 789 | Y789Y | taC | taT | 2 | 2 | B.1.36.8 | 0.002 |
S | 789 | Y789Y | taC | taT | 2 | 2 | B.1.361 | 0.002577 |
S | 789 | Y789Y | taC | taT | 2 | 2 | B.1.389 | 0.002004 |
S | 789 | Y789Y | taC | taT | 2 | 2 | B.1.438.1 | 0.000215 |
S | 789 | Y789Y | taC | taT | 2 | 2 | B.1.564 | 0.000852 |
S | 789 | Y789Y | taC | taT | 2 | 2 | B.1.577 | 0.001375 |
S | 789 | Y789Y | taC | taT | 2 | 2 | B.1.582 | 0.000981 |
S | 789 | Y789Y | taC | taT | 2 | 2 | B.1.609 | 0.000959 |
S | 789 | Y789Y | taC | taT | 2 | 2 | P.1.7 | 0.000639 |
S | 789 | Y789Y | taC | taT | 2 | 2 | Q.1 | 0.000253 |
S | 789 | Y789Y | taC | taT | 1 | 1 | A.2.5 | 0.000499 |
S | 789 | Y789Y | taC | taT | 1 | 1 | AH.3 | 0.003802 |
S | 789 | Y789Y | taC | taT | 1 | 1 | AU.1 | 0.001266 |
S | 789 | Y789Y | taC | taT | 1 | 1 | AY.101 | 0.00049 |
S | 789 | Y789Y | taC | taT | 1 | 1 | AY.105 | 0.000643 |
S | 789 | Y789Y | taC | taT | 1 | 1 | AY.113 | 0.000142 |
S | 789 | Y789Y | taC | taT | 1 | 1 | AY.14 | 0.000088 |
S | 789 | Y789Y | taC | taT | 1 | 1 | AY.19 | 0.00114 |
S | 789 | Y789Y | taC | taT | 1 | 1 | AY.39.1 | 0.00004 |
S | 789 | Y789Y | taC | taT | 1 | 1 | AY.48 | 0.000465 |
S | 789 | Y789Y | taC | taT | 1 | 1 | AY.5.4 | 0.000277 |
S | 789 | Y789Y | taC | taT | 1 | 1 | AY.54 | 0.000095 |
S | 789 | Y789Y | taC | taT | 1 | 1 | AY.57 | 0.000656 |
S | 789 | Y789Y | taC | taT | 1 | 1 | AY.67 | 0.000464 |
S | 789 | Y789Y | taC | taT | 1 | 1 | AY.7 | 0.000196 |
S | 789 | Y789Y | taC | taT | 1 | 1 | AY.77 | 0.001127 |
S | 789 | Y789Y | taC | taT | 1 | 1 | AY.8 | 0.000606 |
S | 789 | Y789Y | taC | taT | 1 | 1 | AY.84 | 0.000437 |
S | 789 | Y789Y | taC | taT | 1 | 1 | AY.85 | 0.000427 |
S | 789 | Y789Y | taC | taT | 1 | 1 | AY.9.1 | 0.000084 |
S | 789 | Y789Y | taC | taT | 1 | 1 | AY.97 | 0.001701 |
S | 789 | Y789Y | taC | taT | 1 | 1 | AY.98 | 0.000079 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.1.1 | 0.000327 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.1.10 | 0.001115 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.1.121 | 0.002427 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.1.129 | 0.009174 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.1.161 | 0.003534 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.1.203 | 0.016949 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.1.205 | 0.003717 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.1.227 | 0.004348 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.1.302 | 0.002075 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.1.316 | 0.000925 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.1.335 | 0.012987 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.1.37 | 0.000193 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.1.388 | 0.045455 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.1.39 | 0.00051 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.1.398 | 0.003226 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.1.448 | 0.002033 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.1.47 | 0.005348 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.1.500 | 0.02 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.1.521 | 0.005348 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.103 | 0.019231 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.128 | 0.000635 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.139 | 0.000733 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.160.26 | 0.002421 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.177.18 | 0.00116 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.177.30 | 0.002513 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.177.31 | 0.011494 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.177.4 | 0.000211 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.177.46 | 0.000918 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.177.56 | 0.000668 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.177.57 | 0.000281 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.177.72 | 0.00339 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.177.73 | 0.000566 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.177.77 | 0.000726 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.177.87 | 0.000728 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.206 | 0.000816 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.219 | 0.009434 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.239 | 0.001221 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.258.7 | 0.001912 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.265 | 0.001271 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.311 | 0.000275 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.356 | 0.001727 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.36.31 | 0.001751 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.396 | 0.000706 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.402 | 0.009804 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.426 | 0.001009 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.456 | 0.003268 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.466.2 | 0.000391 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.509 | 0.000866 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.527 | 0.003704 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.564.1 | 0.001577 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.576 | 0.000907 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.613 | 0.027027 |
S | 789 | Y789Y | taC | taT | 1 | 1 | B.1.620 | 0.000946 |
S | 789 | Y789Y | taC | taT | 1 | 1 | L.3 | 0.003546 |
S | 789 | Y789Y | taC | taT | 1 | 1 | P.1.15 | 0.000232 |
S | 789 | Y789Y | taC | taT | 1 | 1 | P.3 | 0.001595 |
S | 789 | Y789Y | taC | taT | 1 | 1 | Q.3 | 0.000145 |
S | 789 | Y789Y | taC | taT | 1 | 1 | Q.4 | 0.000455 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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