CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
S | 707 | Y707Y | syn | taC | taT | 23456 | 23456 | 1 | 23681-23683 |
Details of the mutation Y707Y within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
S | 707 | Y707Y | taC | taT | 23456 | 23456 | All | 0.004486 |
S | 707 | Y707Y | taC | taT | 7675 | 7675 | B.1.617.2 | 0.0289 |
S | 707 | Y707Y | taC | taT | 5517 | 5517 | AY.43 | 0.024443 |
S | 707 | Y707Y | taC | taT | 1745 | 1745 | B.1.1.7 | 0.001562 |
S | 707 | Y707Y | taC | taT | 1240 | 1240 | AY.4 | 0.00193 |
S | 707 | Y707Y | taC | taT | 629 | 629 | AY.39 | 0.015544 |
S | 707 | Y707Y | taC | taT | 504 | 504 | AY.44 | 0.003068 |
S | 707 | Y707Y | taC | taT | 469 | 469 | AY.25 | 0.002821 |
S | 707 | Y707Y | taC | taT | 465 | 465 | B.1.160.16 | 0.432156 |
S | 707 | Y707Y | taC | taT | 416 | 416 | AY.103 | 0.002583 |
S | 707 | Y707Y | taC | taT | 352 | 352 | B.1.609 | 0.168744 |
S | 707 | Y707Y | taC | taT | 299 | 299 | AY.38 | 0.149276 |
S | 707 | Y707Y | taC | taT | 288 | 288 | B.1.2 | 0.002536 |
S | 707 | Y707Y | taC | taT | 221 | 221 | AY.75 | 0.012381 |
S | 707 | Y707Y | taC | taT | 219 | 219 | AY.102 | 0.005807 |
S | 707 | Y707Y | taC | taT | 157 | 157 | B.1.526 | 0.00369 |
S | 707 | Y707Y | taC | taT | 120 | 120 | B.1 | 0.001099 |
S | 707 | Y707Y | taC | taT | 114 | 114 | AB.1 | 0.934426 |
S | 707 | Y707Y | taC | taT | 113 | 113 | B.1.429 | 0.002659 |
S | 707 | Y707Y | taC | taT | 107 | 107 | AY.46 | 0.011137 |
S | 707 | Y707Y | taC | taT | 104 | 104 | B.1.1.214 | 0.005768 |
S | 707 | Y707Y | taC | taT | 100 | 100 | AY.23 | 0.006975 |
S | 707 | Y707Y | taC | taT | 99 | 99 | B.1.160 | 0.003088 |
S | 707 | Y707Y | taC | taT | 99 | 99 | B.1.234 | 0.013062 |
S | 707 | Y707Y | taC | taT | 97 | 97 | AY.3 | 0.000965 |
S | 707 | Y707Y | taC | taT | 79 | 79 | P.1 | 0.001245 |
S | 707 | Y707Y | taC | taT | 76 | 76 | AY.119 | 0.002683 |
S | 707 | Y707Y | taC | taT | 74 | 74 | B.1.596 | 0.006448 |
S | 707 | Y707Y | taC | taT | 69 | 69 | AY.99.2 | 0.006359 |
S | 707 | Y707Y | taC | taT | 68 | 68 | AY.117 | 0.005747 |
S | 707 | Y707Y | taC | taT | 66 | 66 | B.1.1 | 0.001197 |
S | 707 | Y707Y | taC | taT | 63 | 63 | AY.5.3 | 0.021255 |
S | 707 | Y707Y | taC | taT | 59 | 59 | AY.111 | 0.010806 |
S | 707 | Y707Y | taC | taT | 58 | 58 | AY.33 | 0.003873 |
S | 707 | Y707Y | taC | taT | 57 | 57 | B.1.351 | 0.001694 |
S | 707 | Y707Y | taC | taT | 54 | 54 | B.1.177 | 0.000711 |
S | 707 | Y707Y | taC | taT | 48 | 48 | AY.32 | 0.025559 |
S | 707 | Y707Y | taC | taT | 48 | 48 | B.1.243 | 0.00334 |
S | 707 | Y707Y | taC | taT | 41 | 41 | AY.29 | 0.000647 |
S | 707 | Y707Y | taC | taT | 41 | 41 | AY.5.4 | 0.011345 |
S | 707 | Y707Y | taC | taT | 39 | 39 | B.1.637 | 0.00285 |
S | 707 | Y707Y | taC | taT | 38 | 38 | AY.4.2 | 0.000824 |
S | 707 | Y707Y | taC | taT | 36 | 36 | AY.46.6 | 0.002599 |
S | 707 | Y707Y | taC | taT | 36 | 36 | B.1.36.29 | 0.018624 |
S | 707 | Y707Y | taC | taT | 36 | 36 | C.16 | 0.038176 |
S | 707 | Y707Y | taC | taT | 33 | 33 | AY.26 | 0.000934 |
S | 707 | Y707Y | taC | taT | 33 | 33 | B.1.1.403 | 0.846154 |
S | 707 | Y707Y | taC | taT | 28 | 28 | B.1.427 | 0.001414 |
S | 707 | Y707Y | taC | taT | 25 | 25 | AY.5 | 0.000516 |
S | 707 | Y707Y | taC | taT | 23 | 23 | AY.92 | 0.006607 |
S | 707 | Y707Y | taC | taT | 21 | 21 | AY.45 | 0.002555 |
S | 707 | Y707Y | taC | taT | 21 | 21 | B.1.177.44 | 0.010898 |
S | 707 | Y707Y | taC | taT | 20 | 20 | AY.121 | 0.002706 |
S | 707 | Y707Y | taC | taT | 20 | 20 | AY.42 | 0.000805 |
S | 707 | Y707Y | taC | taT | 20 | 20 | AY.98.1 | 0.000969 |
S | 707 | Y707Y | taC | taT | 20 | 20 | B.1.258.17 | 0.002079 |
S | 707 | Y707Y | taC | taT | 19 | 19 | B.1.1.369 | 0.008478 |
S | 707 | Y707Y | taC | taT | 19 | 19 | B.1.1.50 | 0.012899 |
S | 707 | Y707Y | taC | taT | 18 | 18 | AY.118 | 0.001128 |
S | 707 | Y707Y | taC | taT | 18 | 18 | B.1.1.519 | 0.000715 |
S | 707 | Y707Y | taC | taT | 18 | 18 | B.1.351.5 | 0.010791 |
S | 707 | Y707Y | taC | taT | 17 | 17 | AY.20 | 0.000661 |
S | 707 | Y707Y | taC | taT | 17 | 17 | AY.36 | 0.00252 |
S | 707 | Y707Y | taC | taT | 17 | 17 | AY.41 | 0.004997 |
S | 707 | Y707Y | taC | taT | 17 | 17 | AY.47 | 0.000529 |
S | 707 | Y707Y | taC | taT | 17 | 17 | AY.98 | 0.001343 |
S | 707 | Y707Y | taC | taT | 16 | 16 | AY.77 | 0.018038 |
S | 707 | Y707Y | taC | taT | 16 | 16 | B.1.561 | 0.006352 |
S | 707 | Y707Y | taC | taT | 15 | 15 | B.1.36 | 0.002189 |
S | 707 | Y707Y | taC | taT | 15 | 15 | P.1.14 | 0.000717 |
S | 707 | Y707Y | taC | taT | 14 | 14 | AY.100 | 0.000644 |
S | 707 | Y707Y | taC | taT | 14 | 14 | AY.106 | 0.004689 |
S | 707 | Y707Y | taC | taT | 14 | 14 | AY.84 | 0.006124 |
S | 707 | Y707Y | taC | taT | 13 | 13 | B.1.1.33 | 0.005471 |
S | 707 | Y707Y | taC | taT | 12 | 12 | AY.1 | 0.004749 |
S | 707 | Y707Y | taC | taT | 12 | 12 | AY.79 | 0.014528 |
S | 707 | Y707Y | taC | taT | 12 | 12 | AY.99 | 0.012592 |
S | 707 | Y707Y | taC | taT | 11 | 11 | AY.59 | 0.005826 |
S | 707 | Y707Y | taC | taT | 11 | 11 | AY.9.2 | 0.000404 |
S | 707 | Y707Y | taC | taT | 11 | 11 | B.1.177.21 | 0.000841 |
S | 707 | Y707Y | taC | taT | 11 | 11 | B.1.258 | 0.000732 |
S | 707 | Y707Y | taC | taT | 10 | 10 | AY.116 | 0.002868 |
S | 707 | Y707Y | taC | taT | 9 | 9 | A.28 | 0.02381 |
S | 707 | Y707Y | taC | taT | 9 | 9 | AY.14 | 0.000792 |
S | 707 | Y707Y | taC | taT | 9 | 9 | AY.46.1 | 0.00924 |
S | 707 | Y707Y | taC | taT | 9 | 9 | AY.46.4 | 0.001481 |
S | 707 | Y707Y | taC | taT | 9 | 9 | B.1.617.1 | 0.001161 |
S | 707 | Y707Y | taC | taT | 8 | 8 | AY.4.5 | 0.00086 |
S | 707 | Y707Y | taC | taT | 8 | 8 | B.1.1.263 | 0.012461 |
S | 707 | Y707Y | taC | taT | 8 | 8 | B.1.177.60 | 0.001747 |
S | 707 | Y707Y | taC | taT | 8 | 8 | B.1.340 | 0.034335 |
S | 707 | Y707Y | taC | taT | 8 | 8 | B.1.396 | 0.005646 |
S | 707 | Y707Y | taC | taT | 7 | 7 | AY.114 | 0.001618 |
S | 707 | Y707Y | taC | taT | 7 | 7 | AY.30 | 0.00277 |
S | 707 | Y707Y | taC | taT | 7 | 7 | AY.61 | 0.000733 |
S | 707 | Y707Y | taC | taT | 7 | 7 | AY.67 | 0.00325 |
S | 707 | Y707Y | taC | taT | 7 | 7 | AY.95 | 0.005327 |
S | 707 | Y707Y | taC | taT | 7 | 7 | B.1.1.222 | 0.001428 |
S | 707 | Y707Y | taC | taT | 7 | 7 | B.1.1.282 | 0.081395 |
S | 707 | Y707Y | taC | taT | 7 | 7 | B.1.621 | 0.00062 |
S | 707 | Y707Y | taC | taT | 6 | 6 | AY.120 | 0.000223 |
S | 707 | Y707Y | taC | taT | 6 | 6 | B.1.1.404 | 0.095238 |
S | 707 | Y707Y | taC | taT | 6 | 6 | B.1.1.462 | 0.051724 |
S | 707 | Y707Y | taC | taT | 5 | 5 | A.30 | 0.714286 |
S | 707 | Y707Y | taC | taT | 5 | 5 | AY.110 | 0.000563 |
S | 707 | Y707Y | taC | taT | 5 | 5 | AY.113 | 0.000712 |
S | 707 | Y707Y | taC | taT | 5 | 5 | AY.27 | 0.000324 |
S | 707 | Y707Y | taC | taT | 5 | 5 | AY.3.1 | 0.000426 |
S | 707 | Y707Y | taC | taT | 5 | 5 | AY.34.1 | 0.00255 |
S | 707 | Y707Y | taC | taT | 5 | 5 | AY.40 | 0.004822 |
S | 707 | Y707Y | taC | taT | 5 | 5 | AY.53 | 0.001438 |
S | 707 | Y707Y | taC | taT | 5 | 5 | AY.68 | 0.001369 |
S | 707 | Y707Y | taC | taT | 5 | 5 | AY.89 | 0.02451 |
S | 707 | Y707Y | taC | taT | 5 | 5 | AY.9.1 | 0.000419 |
S | 707 | Y707Y | taC | taT | 5 | 5 | B.1.1.486 | 0.007886 |
S | 707 | Y707Y | taC | taT | 5 | 5 | B.1.110.3 | 0.003592 |
S | 707 | Y707Y | taC | taT | 5 | 5 | B.1.565 | 0.004052 |
S | 707 | Y707Y | taC | taT | 5 | 5 | B.1.597 | 0.023148 |
S | 707 | Y707Y | taC | taT | 5 | 5 | B.1.628 | 0.001762 |
S | 707 | Y707Y | taC | taT | 5 | 5 | P.1.10 | 0.001347 |
S | 707 | Y707Y | taC | taT | 5 | 5 | P.1.15 | 0.001162 |
S | 707 | Y707Y | taC | taT | 4 | 4 | A.2.5 | 0.001996 |
S | 707 | Y707Y | taC | taT | 4 | 4 | AY.10 | 0.00212 |
S | 707 | Y707Y | taC | taT | 4 | 4 | AY.116.1 | 0.001246 |
S | 707 | Y707Y | taC | taT | 4 | 4 | AY.34 | 0.000388 |
S | 707 | Y707Y | taC | taT | 4 | 4 | AY.4.2.1 | 0.000596 |
S | 707 | Y707Y | taC | taT | 4 | 4 | AY.46.2 | 0.002541 |
S | 707 | Y707Y | taC | taT | 4 | 4 | AY.52 | 0.003257 |
S | 707 | Y707Y | taC | taT | 4 | 4 | AY.58 | 0.00363 |
S | 707 | Y707Y | taC | taT | 4 | 4 | AY.64 | 0.002381 |
S | 707 | Y707Y | taC | taT | 4 | 4 | AY.86 | 0.00332 |
S | 707 | Y707Y | taC | taT | 4 | 4 | AY.90 | 0.002738 |
S | 707 | Y707Y | taC | taT | 4 | 4 | B.1.1.317 | 0.001647 |
S | 707 | Y707Y | taC | taT | 4 | 4 | B.1.1.434 | 0.001394 |
S | 707 | Y707Y | taC | taT | 4 | 4 | B.1.36.18 | 0.001681 |
S | 707 | Y707Y | taC | taT | 4 | 4 | B.1.409 | 0.003125 |
S | 707 | Y707Y | taC | taT | 4 | 4 | B.1.575 | 0.001214 |
S | 707 | Y707Y | taC | taT | 4 | 4 | N.5 | 0.007067 |
S | 707 | Y707Y | taC | taT | 4 | 4 | Q.1 | 0.000505 |
S | 707 | Y707Y | taC | taT | 3 | 3 | AD.2 | 0.000657 |
S | 707 | Y707Y | taC | taT | 3 | 3 | AY.105 | 0.001929 |
S | 707 | Y707Y | taC | taT | 3 | 3 | AY.19 | 0.003421 |
S | 707 | Y707Y | taC | taT | 3 | 3 | AY.29.1 | 0.000662 |
S | 707 | Y707Y | taC | taT | 3 | 3 | AY.4.3 | 0.002525 |
S | 707 | Y707Y | taC | taT | 3 | 3 | AY.72 | 0.004082 |
S | 707 | Y707Y | taC | taT | 3 | 3 | AY.74 | 0.000347 |
S | 707 | Y707Y | taC | taT | 3 | 3 | AY.75.1 | 0.000541 |
S | 707 | Y707Y | taC | taT | 3 | 3 | AY.96 | 0.006224 |
S | 707 | Y707Y | taC | taT | 3 | 3 | B.1.1.255 | 0.009091 |
S | 707 | Y707Y | taC | taT | 3 | 3 | B.1.1.294 | 0.003797 |
S | 707 | Y707Y | taC | taT | 3 | 3 | B.1.1.47 | 0.016043 |
S | 707 | Y707Y | taC | taT | 3 | 3 | B.1.147 | 0.002268 |
S | 707 | Y707Y | taC | taT | 3 | 3 | B.1.177.12 | 0.000455 |
S | 707 | Y707Y | taC | taT | 3 | 3 | B.1.177.81 | 0.000568 |
S | 707 | Y707Y | taC | taT | 3 | 3 | B.1.351.2 | 0.000908 |
S | 707 | Y707Y | taC | taT | 3 | 3 | B.1.362 | 0.004622 |
S | 707 | Y707Y | taC | taT | 3 | 3 | P.1.2 | 0.003468 |
S | 707 | Y707Y | taC | taT | 3 | 3 | P.1.9 | 0.014423 |
S | 707 | Y707Y | taC | taT | 3 | 3 | R.1 | 0.00027 |
S | 707 | Y707Y | taC | taT | 2 | 2 | A | 0.000774 |
S | 707 | Y707Y | taC | taT | 2 | 2 | A.27 | 0.003311 |
S | 707 | Y707Y | taC | taT | 2 | 2 | AY.108 | 0.002205 |
S | 707 | Y707Y | taC | taT | 2 | 2 | AY.12 | 0.000632 |
S | 707 | Y707Y | taC | taT | 2 | 2 | AY.120.1 | 0.000642 |
S | 707 | Y707Y | taC | taT | 2 | 2 | AY.120.2 | 0.002571 |
S | 707 | Y707Y | taC | taT | 2 | 2 | AY.13 | 0.000322 |
S | 707 | Y707Y | taC | taT | 2 | 2 | AY.24 | 0.000862 |
S | 707 | Y707Y | taC | taT | 2 | 2 | AY.39.1 | 0.000079 |
S | 707 | Y707Y | taC | taT | 2 | 2 | AY.56 | 0.00321 |
S | 707 | Y707Y | taC | taT | 2 | 2 | AY.6 | 0.000082 |
S | 707 | Y707Y | taC | taT | 2 | 2 | AY.60 | 0.001876 |
S | 707 | Y707Y | taC | taT | 2 | 2 | AY.62 | 0.000871 |
S | 707 | Y707Y | taC | taT | 2 | 2 | AY.70 | 0.000417 |
S | 707 | Y707Y | taC | taT | 2 | 2 | AY.8 | 0.001212 |
S | 707 | Y707Y | taC | taT | 2 | 2 | AY.87 | 0.001665 |
S | 707 | Y707Y | taC | taT | 2 | 2 | AY.9 | 0.000135 |
S | 707 | Y707Y | taC | taT | 2 | 2 | AY.91 | 0.001461 |
S | 707 | Y707Y | taC | taT | 2 | 2 | AY.93 | 0.000546 |
S | 707 | Y707Y | taC | taT | 2 | 2 | B.1.1.28 | 0.000622 |
S | 707 | Y707Y | taC | taT | 2 | 2 | B.1.1.318 | 0.000604 |
S | 707 | Y707Y | taC | taT | 2 | 2 | B.1.1.372 | 0.001377 |
S | 707 | Y707Y | taC | taT | 2 | 2 | B.1.1.39 | 0.001019 |
S | 707 | Y707Y | taC | taT | 2 | 2 | B.1.1.416 | 0.00181 |
S | 707 | Y707Y | taC | taT | 2 | 2 | B.1.1.46 | 0.008734 |
S | 707 | Y707Y | taC | taT | 2 | 2 | B.1.1.63 | 0.000772 |
S | 707 | Y707Y | taC | taT | 2 | 2 | B.1.1.95 | 0.039216 |
S | 707 | Y707Y | taC | taT | 2 | 2 | B.1.177.15 | 0.001262 |
S | 707 | Y707Y | taC | taT | 2 | 2 | B.1.177.57 | 0.000562 |
S | 707 | Y707Y | taC | taT | 2 | 2 | B.1.177.83 | 0.002963 |
S | 707 | Y707Y | taC | taT | 2 | 2 | B.1.177.86 | 0.000367 |
S | 707 | Y707Y | taC | taT | 2 | 2 | B.1.214.2 | 0.001199 |
S | 707 | Y707Y | taC | taT | 2 | 2 | B.1.221 | 0.000142 |
S | 707 | Y707Y | taC | taT | 2 | 2 | B.1.336 | 0.004878 |
S | 707 | Y707Y | taC | taT | 2 | 2 | B.1.36.17 | 0.000988 |
S | 707 | Y707Y | taC | taT | 2 | 2 | B.1.36.19 | 0.018519 |
S | 707 | Y707Y | taC | taT | 2 | 2 | B.1.36.35 | 0.005208 |
S | 707 | Y707Y | taC | taT | 2 | 2 | B.1.36.8 | 0.002 |
S | 707 | Y707Y | taC | taT | 2 | 2 | B.1.391 | 0.002255 |
S | 707 | Y707Y | taC | taT | 2 | 2 | B.1.525 | 0.000226 |
S | 707 | Y707Y | taC | taT | 2 | 2 | B.1.537 | 0.04 |
S | 707 | Y707Y | taC | taT | 2 | 2 | B.1.576 | 0.001813 |
S | 707 | Y707Y | taC | taT | 2 | 2 | B.1.595 | 0.000522 |
S | 707 | Y707Y | taC | taT | 2 | 2 | B.1.618 | 0.008065 |
S | 707 | Y707Y | taC | taT | 2 | 2 | B.1.619.1 | 0.001283 |
S | 707 | Y707Y | taC | taT | 2 | 2 | C.37 | 0.000232 |
S | 707 | Y707Y | taC | taT | 2 | 2 | D.2 | 0.00015 |
S | 707 | Y707Y | taC | taT | 2 | 2 | N.1 | 0.033898 |
S | 707 | Y707Y | taC | taT | 2 | 2 | P.1.1 | 0.000635 |
S | 707 | Y707Y | taC | taT | 2 | 2 | P.2 | 0.000373 |
S | 707 | Y707Y | taC | taT | 1 | 1 | A.23.1 | 0.000704 |
S | 707 | Y707Y | taC | taT | 1 | 1 | AY.104 | 0.001984 |
S | 707 | Y707Y | taC | taT | 1 | 1 | AY.109 | 0.00074 |
S | 707 | Y707Y | taC | taT | 1 | 1 | AY.11 | 0.001339 |
S | 707 | Y707Y | taC | taT | 1 | 1 | AY.2 | 0.000356 |
S | 707 | Y707Y | taC | taT | 1 | 1 | AY.21 | 0.001898 |
S | 707 | Y707Y | taC | taT | 1 | 1 | AY.22 | 0.002092 |
S | 707 | Y707Y | taC | taT | 1 | 1 | AY.23.1 | 0.000417 |
S | 707 | Y707Y | taC | taT | 1 | 1 | AY.28 | 0.00189 |
S | 707 | Y707Y | taC | taT | 1 | 1 | AY.35 | 0.000233 |
S | 707 | Y707Y | taC | taT | 1 | 1 | AY.37 | 0.000316 |
S | 707 | Y707Y | taC | taT | 1 | 1 | AY.46.3 | 0.000934 |
S | 707 | Y707Y | taC | taT | 1 | 1 | AY.46.5 | 0.000198 |
S | 707 | Y707Y | taC | taT | 1 | 1 | AY.54 | 0.000095 |
S | 707 | Y707Y | taC | taT | 1 | 1 | AY.55 | 0.000917 |
S | 707 | Y707Y | taC | taT | 1 | 1 | AY.57 | 0.000656 |
S | 707 | Y707Y | taC | taT | 1 | 1 | AY.65 | 0.000533 |
S | 707 | Y707Y | taC | taT | 1 | 1 | AY.7 | 0.000196 |
S | 707 | Y707Y | taC | taT | 1 | 1 | AY.7.1 | 0.000113 |
S | 707 | Y707Y | taC | taT | 1 | 1 | AY.81 | 0.001992 |
S | 707 | Y707Y | taC | taT | 1 | 1 | AY.97 | 0.001701 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.1.1 | 0.000327 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.1.10 | 0.001115 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.1.12 | 0.007463 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.1.153 | 0.001095 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.1.157 | 0.000913 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.1.174 | 0.003378 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.1.189 | 0.001513 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.1.205 | 0.003717 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.1.220 | 0.001859 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.1.269 | 0.001353 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.1.275 | 0.011236 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.1.277 | 0.000759 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.1.284 | 0.000107 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.1.291 | 0.000742 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.1.298 | 0.000862 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.1.306 | 0.000438 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.1.311 | 0.000358 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.1.316 | 0.000925 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.1.326 | 0.001761 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.1.448 | 0.002033 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.111 | 0.001175 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.139 | 0.000733 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.160.14 | 0.002119 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.160.26 | 0.002421 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.160.28 | 0.002924 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.177.10 | 0.000878 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.177.20 | 0.001517 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.177.31 | 0.011494 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.177.32 | 0.00135 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.177.4 | 0.000211 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.177.43 | 0.001477 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.177.45 | 0.000381 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.177.58 | 0.001332 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.177.62 | 0.001192 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.177.7 | 0.000165 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.177.73 | 0.000566 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.179 | 0.003759 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.206 | 0.000816 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.218 | 0.005155 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.241 | 0.000812 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.311 | 0.000275 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.328 | 0.03125 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.338 | 0.008621 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.351.3 | 0.000876 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.36.16 | 0.001425 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.36.28 | 0.005747 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.36.31 | 0.001751 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.375 | 0.00082 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.381 | 0.007812 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.398 | 0.002976 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.428 | 0.00102 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.470 | 0.001404 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.497 | 0.000315 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.509 | 0.000866 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.517 | 0.000427 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.540 | 0.009709 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.577 | 0.000687 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.578 | 0.017857 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.595.1 | 0.005848 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.623 | 0.000536 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.1.70 | 0.02439 |
S | 707 | Y707Y | taC | taT | 1 | 1 | B.4.1 | 0.018868 |
S | 707 | Y707Y | taC | taT | 1 | 1 | C.30 | 0.001727 |
S | 707 | Y707Y | taC | taT | 1 | 1 | C.35 | 0.000774 |
S | 707 | Y707Y | taC | taT | 1 | 1 | C.39 | 0.018868 |
S | 707 | Y707Y | taC | taT | 1 | 1 | P.1.17 | 0.000162 |
S | 707 | Y707Y | taC | taT | 1 | 1 | P.1.6 | 0.001946 |
S | 707 | Y707Y | taC | taT | 1 | 1 | P.3 | 0.001595 |
S | 707 | Y707Y | taC | taT | 1 | 1 | P.6 | 0.003145 |
S | 707 | Y707Y | taC | taT | 1 | 1 | Q.2 | 0.000613 |
S | 707 | Y707Y | taC | taT | 1 | 1 | Q.3 | 0.000145 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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