CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = Y145del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S145Y145del1delTac-ac43220.51162821995-21997
S145Y145del1deltaCta-4370.16279121995-21997
S145Y145del1delTAc-Nc4360.13953521995-21997
S145Y145del1delTACCG-4330.069767421995-21997
S145Y145del1deltAct-c4330.069767421995-21997
S145Y145del1delTAC-NN4310.023255821995-21997
S145Y145del1deltACt-N4310.023255821995-21997

Details of the mutation Y145del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S145Y145del1Tac-ac2243All0.000004
S145Y145del1taCta-743All0.000001
S145Y145del1TAc-Nc643All0.000001
S145Y145del1tAct-c343All0.000001
S145Y145del1TACCG-343All0.000001
S145Y145del1TAC-NN143All0
S145Y145del1tACt-N143All0
S145Y145del1Tac-ac1212B.1.6210.001062
S145Y145del1TACCG-38B.1.1.70.000003
S145Y145del1Tac-ac28B.1.1.70.000002
S145Y145del1TAc-Nc28B.1.1.70.000002
S145Y145del1taCta-18B.1.1.70.000001
S145Y145del1Tac-ac23AY.40.000003
S145Y145del1tAct-c13AY.40.000002
S145Y145del1Tac-ac12AY.430.000004
S145Y145del1taCta-12AY.430.000004
S145Y145del1TAc-Nc22AY.450.000243
S145Y145del1tAct-c12B.1.20.000009
S145Y145del1taCta-12B.1.20.000009
S145Y145del1taCta-22B.1.6270.00404
S145Y145del1TAC-NN11AD.20.000219
S145Y145del1taCta-11AY.1010.00049
S145Y145del1taCta-11AY.250.000006
S145Y145del1Tac-ac11AY.360.000148
S145Y145del1TAc-Nc11AY.380.000499
S145Y145del1TAc-Nc11AY.910.00073
S145Y145del1Tac-ac11B.10.000009
S145Y145del1tAct-c11B.1.10.000018
S145Y145del1Tac-ac11B.1.1.10.000327
S145Y145del1Tac-ac11B.1.1.3180.000302
S145Y145del1Tac-ac11B.1.2210.000071
S145Y145del1tACt-N11B.1.5070.011236