CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
S | 258 | W258L | nonsyn | tGg | tTg | 13596 | 13588 | 0.999412 | 22334-22336 | |
S | 258 | W258L | nonsyn | TGg | CTg | 13596 | 4 | 0.000294204 | 22334-22336 | |
S | 258 | W258L | nonsyn | tGG | tTA | 13596 | 2 | 0.000147102 | 22334-22336 | |
S | 258 | W258L | nonsyn | TGG | CTT | 13596 | 1 | 0.000073551 | 22334-22336 | |
S | 258 | W258L | nonsyn | TGG | CTC | 13596 | 1 | 0.000073551 | 22334-22336 |
Details of the mutation W258L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
S | 258 | W258L | tGg | tTg | 13588 | 13596 | All | 0.002599 |
S | 258 | W258L | TGg | CTg | 4 | 13596 | All | 0.000001 |
S | 258 | W258L | tGG | tTA | 2 | 13596 | All | 0 |
S | 258 | W258L | TGG | CTC | 1 | 13596 | All | 0 |
S | 258 | W258L | TGG | CTT | 1 | 13596 | All | 0 |
S | 258 | W258L | tGg | tTg | 5137 | 5137 | B.1.427 | 0.259405 |
S | 258 | W258L | tGg | tTg | 2280 | 2280 | AY.1 | 0.902256 |
S | 258 | W258L | tGg | tTg | 750 | 752 | B.1.1.7 | 0.000671 |
S | 258 | W258L | tGG | tTA | 1 | 752 | B.1.1.7 | 0.000001 |
S | 258 | W258L | TGG | CTT | 1 | 752 | B.1.1.7 | 0.000001 |
S | 258 | W258L | tGg | tTg | 658 | 661 | AY.43 | 0.002915 |
S | 258 | W258L | TGg | CTg | 2 | 661 | AY.43 | 0.000009 |
S | 258 | W258L | TGG | CTC | 1 | 661 | AY.43 | 0.000004 |
S | 258 | W258L | tGg | tTg | 621 | 621 | AY.4 | 0.000967 |
S | 258 | W258L | tGg | tTg | 434 | 435 | B.1.617.2 | 0.001634 |
S | 258 | W258L | TGg | CTg | 1 | 435 | B.1.617.2 | 0.000004 |
S | 258 | W258L | tGg | tTg | 301 | 301 | AY.33 | 0.0201 |
S | 258 | W258L | tGg | tTg | 221 | 221 | AY.25 | 0.001329 |
S | 258 | W258L | tGg | tTg | 206 | 206 | AY.3 | 0.002049 |
S | 258 | W258L | tGg | tTg | 178 | 179 | B.1 | 0.00163 |
S | 258 | W258L | TGg | CTg | 1 | 179 | B.1 | 0.000009 |
S | 258 | W258L | tGg | tTg | 177 | 177 | AZ.5 | 0.621053 |
S | 258 | W258L | tGg | tTg | 135 | 135 | AY.44 | 0.000822 |
S | 258 | W258L | tGg | tTg | 114 | 114 | AY.103 | 0.000708 |
S | 258 | W258L | tGg | tTg | 111 | 111 | B.1.637 | 0.008111 |
S | 258 | W258L | tGg | tTg | 96 | 96 | AY.5 | 0.001982 |
S | 258 | W258L | tGg | tTg | 83 | 83 | AY.69 | 0.015494 |
S | 258 | W258L | tGg | tTg | 79 | 79 | AY.39 | 0.001952 |
S | 258 | W258L | tGg | tTg | 79 | 79 | B.1.429 | 0.001859 |
S | 258 | W258L | tGg | tTg | 64 | 64 | AY.121 | 0.00866 |
S | 258 | W258L | tGg | tTg | 59 | 59 | AY.99.2 | 0.005437 |
S | 258 | W258L | tGg | tTg | 56 | 56 | P.1.14 | 0.002677 |
S | 258 | W258L | tGg | tTg | 55 | 55 | AY.106 | 0.018419 |
S | 258 | W258L | tGg | tTg | 55 | 55 | B.1.526 | 0.001293 |
S | 258 | W258L | tGg | tTg | 52 | 52 | AY.117 | 0.004395 |
S | 258 | W258L | tGg | tTg | 48 | 48 | AY.20 | 0.001866 |
S | 258 | W258L | tGg | tTg | 48 | 48 | AY.6 | 0.001974 |
S | 258 | W258L | tGg | tTg | 47 | 47 | AY.75 | 0.002633 |
S | 258 | W258L | tGg | tTg | 46 | 46 | AY.102 | 0.00122 |
S | 258 | W258L | tGg | tTg | 44 | 44 | AY.26 | 0.001246 |
S | 258 | W258L | tGg | tTg | 44 | 44 | AY.39.1 | 0.001743 |
S | 258 | W258L | tGg | tTg | 43 | 43 | AY.120 | 0.001599 |
S | 258 | W258L | tGg | tTg | 40 | 40 | AY.92 | 0.011491 |
S | 258 | W258L | tGg | tTg | 38 | 38 | AY.9 | 0.002569 |
S | 258 | W258L | tGg | tTg | 34 | 34 | AY.4.2 | 0.000737 |
S | 258 | W258L | tGg | tTg | 32 | 32 | AY.59 | 0.016949 |
S | 258 | W258L | tGg | tTg | 31 | 31 | AY.97 | 0.052721 |
S | 258 | W258L | tGg | tTg | 30 | 30 | AY.7.1 | 0.003381 |
S | 258 | W258L | tGg | tTg | 30 | 30 | Q.2 | 0.018405 |
S | 258 | W258L | tGg | tTg | 29 | 29 | AY.29 | 0.000457 |
S | 258 | W258L | tGg | tTg | 29 | 29 | AY.9.2 | 0.001065 |
S | 258 | W258L | tGg | tTg | 29 | 29 | B.1.1 | 0.000526 |
S | 258 | W258L | tGg | tTg | 28 | 28 | B.1.617.1 | 0.003611 |
S | 258 | W258L | tGg | tTg | 27 | 27 | B.1.1.253 | 0.067669 |
S | 258 | W258L | tGg | tTg | 26 | 26 | AY.98.1 | 0.001259 |
S | 258 | W258L | tGg | tTg | 25 | 25 | B.1.1.480 | 0.625 |
S | 258 | W258L | tGg | tTg | 24 | 24 | B.1.2 | 0.000211 |
S | 258 | W258L | tGg | tTg | 23 | 23 | B.1.369 | 0.00656 |
S | 258 | W258L | tGg | tTg | 22 | 22 | AY.91 | 0.01607 |
S | 258 | W258L | tGg | tTg | 20 | 20 | B.1.177 | 0.000263 |
S | 258 | W258L | tGg | tTg | 19 | 19 | B.1.157 | 0.056716 |
S | 258 | W258L | tGg | tTg | 18 | 18 | AY.23 | 0.001255 |
S | 258 | W258L | tGg | tTg | 16 | 16 | AY.119 | 0.000565 |
S | 258 | W258L | tGg | tTg | 16 | 16 | AY.54 | 0.001526 |
S | 258 | W258L | tGg | tTg | 16 | 16 | AY.73 | 0.010645 |
S | 258 | W258L | tGg | tTg | 16 | 16 | B.1.1.519 | 0.000635 |
S | 258 | W258L | tGg | tTg | 15 | 15 | AY.113 | 0.002136 |
S | 258 | W258L | tGg | tTg | 15 | 15 | AY.42 | 0.000603 |
S | 258 | W258L | tGg | tTg | 14 | 14 | P.1 | 0.000221 |
S | 258 | W258L | tGg | tTg | 13 | 13 | B.1.160 | 0.000405 |
S | 258 | W258L | tGg | tTg | 12 | 12 | AY.85 | 0.005126 |
S | 258 | W258L | tGg | tTg | 12 | 12 | B.1.389 | 0.012024 |
S | 258 | W258L | tGg | tTg | 12 | 12 | P.2 | 0.00224 |
S | 258 | W258L | tGg | tTg | 11 | 11 | AY.100 | 0.000506 |
S | 258 | W258L | tGg | tTg | 11 | 11 | AY.46 | 0.001145 |
S | 258 | W258L | tGg | tTg | 11 | 11 | AY.96 | 0.022822 |
S | 258 | W258L | tGg | tTg | 11 | 11 | AY.98 | 0.000869 |
S | 258 | W258L | tGg | tTg | 10 | 10 | A.2.5 | 0.00499 |
S | 258 | W258L | tGg | tTg | 10 | 10 | AY.118 | 0.000626 |
S | 258 | W258L | tGg | tTg | 10 | 10 | AY.45 | 0.001217 |
S | 258 | W258L | tGg | tTg | 10 | 10 | AY.82 | 0.013569 |
S | 258 | W258L | tGg | tTg | 10 | 10 | B.1.336 | 0.02439 |
S | 258 | W258L | tGg | tTg | 10 | 10 | B.1.351 | 0.000297 |
S | 258 | W258L | tGg | tTg | 10 | 10 | B.1.575.1 | 0.02439 |
S | 258 | W258L | tGg | tTg | 9 | 9 | AY.34 | 0.000873 |
S | 258 | W258L | tGg | tTg | 9 | 9 | B.1.619 | 0.00784 |
S | 258 | W258L | tGg | tTg | 9 | 9 | D.2 | 0.000675 |
S | 258 | W258L | tGg | tTg | 8 | 8 | AY.46.6 | 0.000578 |
S | 258 | W258L | tGg | tTg | 8 | 8 | AY.74 | 0.000925 |
S | 258 | W258L | tGg | tTg | 8 | 8 | AY.9.1 | 0.00067 |
S | 258 | W258L | tGg | tTg | 8 | 8 | B.1.595 | 0.002088 |
S | 258 | W258L | tGg | tTg | 7 | 7 | AY.63 | 0.002708 |
S | 258 | W258L | tGg | tTg | 7 | 7 | B.1.1.136 | 0.148936 |
S | 258 | W258L | tGg | tTg | 6 | 6 | AY.46.4 | 0.000987 |
S | 258 | W258L | tGg | tTg | 6 | 6 | B.1.1.399 | 0.545455 |
S | 258 | W258L | tGg | tTg | 5 | 5 | AY.13 | 0.000805 |
S | 258 | W258L | tGg | tTg | 5 | 5 | AY.24 | 0.002155 |
S | 258 | W258L | tGg | tTg | 5 | 5 | AY.3.1 | 0.000426 |
S | 258 | W258L | tGg | tTg | 5 | 5 | AY.4.5 | 0.000537 |
S | 258 | W258L | tGg | tTg | 5 | 5 | AY.60 | 0.00469 |
S | 258 | W258L | tGg | tTg | 5 | 5 | AY.61 | 0.000524 |
S | 258 | W258L | tGg | tTg | 5 | 5 | AY.67 | 0.002321 |
S | 258 | W258L | tGg | tTg | 5 | 5 | AY.75.1 | 0.000902 |
S | 258 | W258L | tGg | tTg | 5 | 5 | B.1.1.25 | 0.002843 |
S | 258 | W258L | tGg | tTg | 5 | 5 | B.1.1.318 | 0.001509 |
S | 258 | W258L | tGg | tTg | 5 | 5 | B.1.1.33 | 0.002104 |
S | 258 | W258L | tGg | tTg | 5 | 5 | B.1.258 | 0.000333 |
S | 258 | W258L | tGg | tTg | 5 | 5 | B.1.258.17 | 0.00052 |
S | 258 | W258L | tGg | tTg | 5 | 5 | B.1.36 | 0.00073 |
S | 258 | W258L | tGg | tTg | 5 | 5 | B.1.466.2 | 0.001956 |
S | 258 | W258L | tGg | tTg | 5 | 5 | B.1.596 | 0.000436 |
S | 258 | W258L | tGg | tTg | 5 | 5 | B.1.621 | 0.000443 |
S | 258 | W258L | tGg | tTg | 4 | 4 | AY.116 | 0.001147 |
S | 258 | W258L | tGg | tTg | 4 | 4 | AY.27 | 0.000259 |
S | 258 | W258L | tGg | tTg | 4 | 4 | AY.4.4 | 0.001637 |
S | 258 | W258L | tGg | tTg | 4 | 4 | AY.51 | 0.003636 |
S | 258 | W258L | tGg | tTg | 4 | 4 | AY.55 | 0.00367 |
S | 258 | W258L | tGg | tTg | 4 | 4 | AY.56 | 0.006421 |
S | 258 | W258L | tGg | tTg | 4 | 4 | AY.62 | 0.001743 |
S | 258 | W258L | tGg | tTg | 4 | 4 | AY.70 | 0.000834 |
S | 258 | W258L | tGg | tTg | 4 | 4 | AY.80 | 0.004515 |
S | 258 | W258L | tGg | tTg | 4 | 4 | AY.93 | 0.001092 |
S | 258 | W258L | tGg | tTg | 4 | 4 | B.1.1.28 | 0.001245 |
S | 258 | W258L | tGg | tTg | 4 | 4 | B.1.177.45 | 0.001525 |
S | 258 | W258L | tGg | tTg | 4 | 4 | B.1.243 | 0.000278 |
S | 258 | W258L | tGg | tTg | 4 | 4 | C.37 | 0.000464 |
S | 258 | W258L | tGg | tTg | 4 | 4 | P.1.1 | 0.001271 |
S | 258 | W258L | tGg | tTg | 3 | 3 | A.30 | 0.428571 |
S | 258 | W258L | tGg | tTg | 3 | 3 | AY.110 | 0.000338 |
S | 258 | W258L | tGg | tTg | 3 | 3 | AY.111 | 0.000549 |
S | 258 | W258L | tGg | tTg | 3 | 3 | AY.29.1 | 0.000662 |
S | 258 | W258L | tGg | tTg | 3 | 3 | AY.47 | 0.000093 |
S | 258 | W258L | tGg | tTg | 3 | 3 | AY.5.3 | 0.001012 |
S | 258 | W258L | tGg | tTg | 3 | 3 | AY.68 | 0.000821 |
S | 258 | W258L | tGg | tTg | 3 | 3 | B.1.1.189 | 0.004539 |
S | 258 | W258L | tGg | tTg | 3 | 3 | B.1.1.216 | 0.002671 |
S | 258 | W258L | tGg | tTg | 3 | 3 | B.1.1.291 | 0.002227 |
S | 258 | W258L | tGg | tTg | 3 | 3 | B.1.240 | 0.000647 |
S | 258 | W258L | tGg | tTg | 3 | 3 | C.18 | 0.007772 |
S | 258 | W258L | tGg | tTg | 3 | 3 | P.1.4 | 0.00293 |
S | 258 | W258L | tGg | tTg | 2 | 2 | A.24 | 0.142857 |
S | 258 | W258L | tGg | tTg | 2 | 2 | AY.105 | 0.001286 |
S | 258 | W258L | tGg | tTg | 2 | 2 | AY.109 | 0.001479 |
S | 258 | W258L | tGg | tTg | 2 | 2 | AY.12 | 0.000632 |
S | 258 | W258L | tGg | tTg | 2 | 2 | AY.16.1 | 0.00094 |
S | 258 | W258L | tGg | tTg | 2 | 2 | AY.28 | 0.003781 |
S | 258 | W258L | tGg | tTg | 2 | 2 | AY.30 | 0.000791 |
S | 258 | W258L | tGg | tTg | 2 | 2 | AY.34.1 | 0.00102 |
S | 258 | W258L | tGg | tTg | 2 | 2 | AY.36 | 0.000296 |
S | 258 | W258L | tGg | tTg | 2 | 2 | AY.40 | 0.001929 |
S | 258 | W258L | tGg | tTg | 2 | 2 | AY.46.2 | 0.001271 |
S | 258 | W258L | tGg | tTg | 2 | 2 | AY.46.3 | 0.001867 |
S | 258 | W258L | tGg | tTg | 2 | 2 | AY.48 | 0.00093 |
S | 258 | W258L | tGg | tTg | 2 | 2 | AY.52 | 0.001629 |
S | 258 | W258L | tGg | tTg | 2 | 2 | AY.65 | 0.001066 |
S | 258 | W258L | tGg | tTg | 2 | 2 | AY.78 | 0.003082 |
S | 258 | W258L | tGg | tTg | 2 | 2 | AY.79 | 0.002421 |
S | 258 | W258L | tGg | tTg | 2 | 2 | AY.8 | 0.001212 |
S | 258 | W258L | tGg | tTg | 2 | 2 | AY.84 | 0.000875 |
S | 258 | W258L | tGg | tTg | 2 | 2 | AY.87 | 0.001665 |
S | 258 | W258L | tGg | tTg | 2 | 2 | B | 0.000256 |
S | 258 | W258L | tGg | tTg | 2 | 2 | B.1.1.214 | 0.000111 |
S | 258 | W258L | tGg | tTg | 2 | 2 | B.1.1.222 | 0.000408 |
S | 258 | W258L | tGg | tTg | 2 | 2 | B.1.1.277 | 0.001517 |
S | 258 | W258L | tGg | tTg | 2 | 2 | B.1.1.329 | 0.007692 |
S | 258 | W258L | tGg | tTg | 2 | 2 | B.1.1.335 | 0.025974 |
S | 258 | W258L | tGg | tTg | 2 | 2 | B.1.1.348 | 0.001592 |
S | 258 | W258L | tGg | tTg | 2 | 2 | B.1.1.464 | 0.002946 |
S | 258 | W258L | tGg | tTg | 2 | 2 | B.1.1.63 | 0.000772 |
S | 258 | W258L | tGg | tTg | 2 | 2 | B.1.12 | 0.016 |
S | 258 | W258L | tGg | tTg | 2 | 2 | B.1.177.21 | 0.000153 |
S | 258 | W258L | tGg | tTg | 2 | 2 | B.1.177.43 | 0.002954 |
S | 258 | W258L | tGg | tTg | 2 | 2 | B.1.177.57 | 0.000562 |
S | 258 | W258L | tGg | tTg | 2 | 2 | B.1.177.7 | 0.00033 |
S | 258 | W258L | tGg | tTg | 2 | 2 | B.1.177.73 | 0.001133 |
S | 258 | W258L | tGg | tTg | 2 | 2 | B.1.221 | 0.000142 |
S | 258 | W258L | tGg | tTg | 2 | 2 | B.1.367 | 0.001585 |
S | 258 | W258L | tGg | tTg | 2 | 2 | B.1.438.1 | 0.000215 |
S | 258 | W258L | tGg | tTg | 2 | 2 | B.1.497 | 0.00063 |
S | 258 | W258L | tGg | tTg | 2 | 2 | B.1.590 | 0.009091 |
S | 258 | W258L | tGg | tTg | 2 | 2 | B.1.617.3 | 0.00597 |
S | 258 | W258L | tGg | tTg | 2 | 2 | B.1.628 | 0.000705 |
S | 258 | W258L | tGg | tTg | 2 | 2 | B.40 | 0.000729 |
S | 258 | W258L | tGg | tTg | 2 | 2 | P.1.15 | 0.000465 |
S | 258 | W258L | tGg | tTg | 2 | 2 | Q.8 | 0.00033 |
S | 258 | W258L | tGg | tTg | 1 | 1 | A | 0.000387 |
S | 258 | W258L | tGg | tTg | 1 | 1 | A.2.2 | 0.001689 |
S | 258 | W258L | tGg | tTg | 1 | 1 | A.23.1 | 0.000704 |
S | 258 | W258L | tGg | tTg | 1 | 1 | AY.101 | 0.00049 |
S | 258 | W258L | tGg | tTg | 1 | 1 | AY.108 | 0.001103 |
S | 258 | W258L | tGg | tTg | 1 | 1 | AY.14 | 0.000088 |
S | 258 | W258L | tGg | tTg | 1 | 1 | AY.16 | 0.00038 |
S | 258 | W258L | tGg | tTg | 1 | 1 | AY.19 | 0.00114 |
S | 258 | W258L | tGg | tTg | 1 | 1 | AY.22 | 0.002092 |
S | 258 | W258L | tGg | tTg | 1 | 1 | AY.32 | 0.000532 |
S | 258 | W258L | tGg | tTg | 1 | 1 | AY.38 | 0.000499 |
S | 258 | W258L | tGg | tTg | 1 | 1 | AY.4.2.1 | 0.000149 |
S | 258 | W258L | tGg | tTg | 1 | 1 | AY.49 | 0.003195 |
S | 258 | W258L | tGg | tTg | 1 | 1 | AY.5.4 | 0.000277 |
S | 258 | W258L | tGg | tTg | 1 | 1 | AY.58 | 0.000907 |
S | 258 | W258L | tGg | tTg | 1 | 1 | AY.77 | 0.001127 |
S | 258 | W258L | tGg | tTg | 1 | 1 | AY.86 | 0.00083 |
S | 258 | W258L | tGg | tTg | 1 | 1 | AY.88 | 0.000884 |
S | 258 | W258L | tGg | tTg | 1 | 1 | AY.94 | 0.000443 |
S | 258 | W258L | tGg | tTg | 1 | 1 | AY.95 | 0.000761 |
S | 258 | W258L | tGg | tTg | 1 | 1 | AY.99 | 0.001049 |
S | 258 | W258L | tGg | tTg | 1 | 1 | AZ.2 | 0.000821 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.1.1 | 0.000327 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.1.153 | 0.001095 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.1.186 | 0.003436 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.1.198 | 0.001468 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.1.220 | 0.001859 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.1.269 | 0.001353 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.1.284 | 0.000107 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.1.317 | 0.000412 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.1.344 | 0.010753 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.1.359 | 0.027778 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.1.369 | 0.000446 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.1.388 | 0.045455 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.1.39 | 0.00051 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.1.416 | 0.000905 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.1.432 | 0.001266 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.1.46 | 0.004367 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.113 | 0.015625 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.177.32 | 0.00135 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.177.35 | 0.000691 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.177.5 | 0.001242 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.177.6 | 0.000977 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.177.60 | 0.000218 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.177.65 | 0.000665 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.177.8 | 0.000752 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.177.83 | 0.001481 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.177.86 | 0.000183 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.177.87 | 0.000728 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.177.9 | 0.001332 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.206 | 0.000816 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.227 | 0.047619 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.232 | 0.000537 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.258.12 | 0.007874 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.279 | 0.000514 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.289 | 0.00266 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.311 | 0.000275 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.36.22 | 0.001208 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.36.38 | 0.001642 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.36.8 | 0.001 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.361 | 0.001289 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.395 | 0.007042 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.398 | 0.002976 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.400 | 0.000429 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.416.1 | 0.001563 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.499 | 0.00105 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.538 | 0.008065 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.561 | 0.000397 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.565 | 0.00081 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.575 | 0.000303 |
S | 258 | W258L | tGG | tTA | 1 | 1 | B.1.577 | 0.000687 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.578 | 0.017857 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.587 | 0.001898 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.620 | 0.000946 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.1.94 | 0.027027 |
S | 258 | W258L | tGg | tTg | 1 | 1 | B.6 | 0.00091 |
S | 258 | W258L | tGg | tTg | 1 | 1 | C.36.3 | 0.000567 |
S | 258 | W258L | tGg | tTg | 1 | 1 | P.1.12 | 0.000484 |
S | 258 | W258L | tGg | tTg | 1 | 1 | P.1.16 | 0.000374 |
S | 258 | W258L | tGg | tTg | 1 | 1 | P.1.17 | 0.000162 |
S | 258 | W258L | tGg | tTg | 1 | 1 | P.1.2 | 0.001156 |
S | 258 | W258L | tGg | tTg | 1 | 1 | P.1.8 | 0.004785 |
S | 258 | W258L | tGg | tTg | 1 | 1 | Q.1 | 0.000126 |
S | 258 | W258L | tGg | tTg | 1 | 1 | Q.7 | 0.001111 |
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CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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