CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = W152R

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S152W152RnonsynTggAgg21934197280.89942622016-22018
S152W152RnonsynTggCgg2193421970.10016422016-22018
S152W152RnonsynTgGAgA2193440.00018236522016-22018
S152W152RnonsynTgGCgT2193440.00018236522016-22018
S152W152RnonsynTgGCgA2193410.000045591322016-22018

Details of the mutation W152R within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S152W152RTggAgg1972821934All0.003773
S152W152RTggCgg219721934All0.00042
S152W152RTgGAgA421934All0.000001
S152W152RTgGCgT421934All0.000001
S152W152RTgGCgA121934All0
S152W152RTggAgg1686617746B.1.1.70.015099
S152W152RTggCgg87917746B.1.1.70.000787
S152W152RTgGAgA117746B.1.1.70.000001
S152W152RTggAgg17141714C.36.30.972206
S152W152RTggCgg327328AY.1030.00203
S152W152RTggAgg1328AY.1030.000006
S152W152RTggAgg323326C.36.3.10.877717
S152W152RTggCgg3326C.36.3.10.008152
S152W152RTggCgg226316AY.40.000352
S152W152RTggAgg90316AY.40.00014
S152W152RTggCgg198198B.1.1110.232667
S152W152RTggAgg122122B.1.466.20.047731
S152W152RTggAgg107107B.1.5750.032464
S152W152RTggCgg5799B.10.000522
S152W152RTggAgg4099B.10.000366
S152W152RTgGCgT299B.10.000018
S152W152RTggAgg8890A.2.50.043912
S152W152RTggCgg190A.2.50.000499
S152W152RTgGAgA190A.2.50.000499
S152W152RTggCgg8484B.1.2340.011083
S152W152RTggAgg7676B.1.177.840.506667
S152W152RTggCgg5658B.1.1.3180.016898
S152W152RTggAgg258B.1.1.3180.000604
S152W152RTggCgg2542B.1.10.000454
S152W152RTggAgg1742B.1.10.000308
S152W152RTggAgg3838B.1.1470.028723
S152W152RTggCgg2935B.1.20.000255
S152W152RTggAgg635B.1.20.000053
S152W152RTggAgg3335C.360.030055
S152W152RTggCgg235C.360.001821
S152W152RTggCgg3033B.1.1.2940.037975
S152W152RTggAgg333B.1.1.2940.003797
S152W152RTggAgg2332B.1.6210.002036
S152W152RTggCgg932B.1.6210.000797
S152W152RTggAgg2829B.1.6370.002046
S152W152RTggCgg129B.1.6370.000073
S152W152RTggAgg2127AY.430.000093
S152W152RTggCgg527AY.430.000022
S152W152RTgGAgA127AY.430.000004
S152W152RTggCgg2727B.1.1.2140.001497
S152W152RTggCgg2424C.1.20.102128
S152W152RTggCgg1621B.1.617.20.00006
S152W152RTggAgg521B.1.617.20.000019
S152W152RTggCgg1320AY.440.000079
S152W152RTggAgg720AY.440.000043
S152W152RTggCgg1415B.1.1600.000437
S152W152RTggAgg115B.1.1600.000031
S152W152RTggAgg1013B.1.1770.000132
S152W152RTggCgg313B.1.1770.00004
S152W152RTggCgg711P.10.00011
S152W152RTggAgg411P.10.000063
S152W152RTggCgg1111Q.40.005002
S152W152RTggAgg1010B.1.1.630.003858
S152W152RTggCgg99B.1.5600.041667
S152W152RTggCgg99B.1.6380.473684
S152W152RTggAgg88B.1.1.2970.017897
S152W152RTggCgg88B.1.177.600.001747
S152W152RTggCgg88B.1.5960.000697
S152W152RTggCgg67AY.200.000233
S152W152RTggAgg17AY.200.000039
S152W152RTggAgg66B.1.1.1350.028169
S152W152RTggCgg66B.1.6250.014118
S152W152RTggCgg66C.320.139535
S152W152RTggAgg56C.350.00387
S152W152RTggCgg16C.350.000774
S152W152RTggCgg55AY.250.00003
S152W152RTggAgg55B.1.230.030303
S152W152RTggAgg45B.1.2430.000278
S152W152RTggCgg15B.1.2430.00007
S152W152RTggCgg45B.1.4090.003125
S152W152RTggAgg15B.1.4090.000781
S152W152RTggCgg35B.1.5250.000339
S152W152RTggAgg25B.1.5250.000226
S152W152RTggAgg55Q.10.000632
S152W152RTggCgg34AY.260.000085
S152W152RTggAgg14AY.260.000028
S152W152RTggCgg34AY.4.20.000065
S152W152RTggAgg14AY.4.20.000022
S152W152RTggCgg44B.1.1.2160.003562
S152W152RTggAgg44B.1.1.5260.014184
S152W152RTggCgg44B.1.177.850.021739
S152W152RTggAgg34B.1.5260.000071
S152W152RTggCgg14B.1.5260.000024
S152W152RTggCgg33AY.290.000047
S152W152RTggAgg23AY.30.00002
S152W152RTggCgg13AY.30.00001
S152W152RTggCgg33AY.360.000445
S152W152RTggCgg33AY.390.000074
S152W152RTggCgg13AY.46.60.000072
S152W152RTggAgg13AY.46.60.000072
S152W152RTgGAgA13AY.46.60.000072
S152W152RTggAgg23B.1.1.10.000653
S152W152RTggCgg13B.1.1.10.000327
S152W152RTggAgg23B.1.5950.000522
S152W152RTggCgg13B.1.5950.000261
S152W152RTggCgg33B.1.621.10.001517
S152W152RTggCgg22A0.000774
S152W152RTggAgg22AU.10.002532
S152W152RTggAgg22AY.1090.001479
S152W152RTggCgg12AY.1170.000085
S152W152RTggAgg12AY.1170.000085
S152W152RTggCgg22AY.240.000862
S152W152RTggCgg22AY.29.10.000441
S152W152RTggCgg22AY.930.000546
S152W152RTggAgg12AY.99.20.000092
S152W152RTggCgg12AY.99.20.000092
S152W152RTggCgg22B0.000256
S152W152RTggCgg22B.1.1.1740.006757
S152W152RTggAgg22B.1.1.5190.000079
S152W152RTggCgg12B.1.3110.000275
S152W152RTggAgg12B.1.3110.000275
S152W152RTggAgg22B.1.3510.000059
S152W152RTggAgg22B.1.415.10.015152
S152W152RTggAgg12B.1.4290.000024
S152W152RTgGCgT12B.1.4290.000024
S152W152RTggCgg22B.1.5680.002222
S152W152RTggAgg12B.1.6090.000479
S152W152RTggCgg12B.1.6090.000479
S152W152RTggAgg22B.1.810.042553
S152W152RTggCgg12P.1.140.000048
S152W152RTggAgg12P.1.140.000048
S152W152RTggCgg12Q.80.000165
S152W152RTggAgg12Q.80.000165
S152W152RTggCgg11A.10.000282
S152W152RTgGCgT11AY.1020.000027
S152W152RTggAgg11AY.1100.000113
S152W152RTggCgg11AY.120.000316
S152W152RTggCgg11AY.1210.000135
S152W152RTgGCgA11AY.160.00038
S152W152RTggCgg11AY.23.10.000417
S152W152RTggCgg11AY.270.000065
S152W152RTggCgg11AY.330.000067
S152W152RTggAgg11AY.420.00004
S152W152RTggCgg11AY.460.000104
S152W152RTggCgg11AY.480.000465
S152W152RTggCgg11AY.50.000021
S152W152RTggCgg11AY.550.000917
S152W152RTggCgg11AY.560.001605
S152W152RTggCgg11AY.610.000105
S152W152RTggCgg11AY.690.000187
S152W152RTggAgg11AY.7.10.000113
S152W152RTggAgg11AY.700.000209
S152W152RTggAgg11AY.750.000056
S152W152RTggAgg11AY.75.10.00018
S152W152RTggCgg11AZ.20.000821
S152W152RTggCgg11B.1.1.250.000569
S152W152RTggAgg11B.1.1.2540.011236
S152W152RTggAgg11B.1.1.2690.001353
S152W152RTggCgg11B.1.1.3060.000438
S152W152RTggCgg11B.1.1.330.000421
S152W152RTggAgg11B.1.1.3720.000689
S152W152RTggCgg11B.1.1.3980.003226
S152W152RTggAgg11B.1.1.4090.002833
S152W152RTggAgg11B.1.1.4640.001473
S152W152RTggCgg11B.1.1.540.003021
S152W152RTggCgg11B.1.1.700.000341
S152W152RTggCgg11B.1.1280.000635
S152W152RTggAgg11B.1.1570.002985
S152W152RTggCgg11B.1.160.90.007194
S152W152RTggCgg11B.1.177.120.000152
S152W152RTggCgg11B.1.177.750.001041
S152W152RTggCgg11B.1.177.760.002494
S152W152RTggAgg11B.1.2210.000071
S152W152RTggCgg11B.1.2400.000216
S152W152RTggAgg11B.1.258.110.000396
S152W152RTggCgg11B.1.360.000146
S152W152RTggCgg11B.1.36.190.009259
S152W152RTggAgg11B.1.3750.00082
S152W152RTggAgg11B.1.4270.00005
S152W152RTggCgg11B.1.4990.00105
S152W152RTggCgg11B.1.5760.000907
S152W152RTggAgg11B.1.617.10.000129
S152W152RTggAgg11B.1.770.045455
S152W152RTggCgg11B.1.940.027027
S152W152RTggAgg11B.4.50.011905
S152W152RTggAgg11C.160.00106
S152W152RTggCgg11P.1.10.000318
S152W152RTggAgg11P.1.170.000162
S152W152RTggCgg11P.20.000187