CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = V90F

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S90V90FnonsynGttTtt161416130.9993821830-21832
S90V90FnonsynGtTTtC161410.00061957921830-21832

Details of the mutation V90F within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S90V90FGttTtt16131614All0.000309
S90V90FGtTTtC11614All0
S90V90FGttTtt425425B.1.1.70.00038
S90V90FGttTtt239239B.1.177.230.773463
S90V90FGttTtt106106B.1.3670.083994
S90V90FGttTtt8989B.1.20.000784
S90V90FGttTtt8787B.1.2410.070617
S90V90FGttTtt7979AY.40.000123
S90V90FGttTtt7676AY.330.005075
S90V90FGttTtt6262AY.430.000275
S90V90FGttTtt3535B.10.000321
S90V90FGttTtt2828B.1.5260.000658
S90V90FGttTtt2121AY.250.000126
S90V90FGttTtt2121B.1.10.000381
S90V90FGttTtt2121Q.10.002653
S90V90FGttTtt1919B.1.617.20.000072
S90V90FGttTtt1818B.1.4000.007722
S90V90FGttTtt1313B.1.1770.000171
S90V90FGttTtt1112AY.1030.000068
S90V90FGtTTtC112AY.1030.000006
S90V90FGttTtt1111AY.440.000067
S90V90FGttTtt1010A.2.30.047393
S90V90FGttTtt1010AY.1070.00466
S90V90FGttTtt99AY.4.20.000195
S90V90FGttTtt88B.1.3990.015474
S90V90FGttTtt66AY.690.00112
S90V90FGttTtt66B.1.1.2840.000644
S90V90FGttTtt55AY.270.000324
S90V90FGttTtt55B.1.2210.000355
S90V90FGttTtt55P.10.000079
S90V90FGttTtt44AY.1200.000149
S90V90FGttTtt44AY.290.000063
S90V90FGttTtt44AY.50.000083
S90V90FGttTtt44B.1.1.5190.000159
S90V90FGttTtt44B.1.5210.0199
S90V90FGttTtt44B.1.5610.001588
S90V90FGttTtt44B.1.6190.003484
S90V90FGttTtt33AY.30.00003
S90V90FGttTtt33AY.390.000074
S90V90FGttTtt33AY.980.000237
S90V90FGttTtt33AY.98.10.000145
S90V90FGttTtt33B.1.1.280.000934
S90V90FGttTtt33B.1.1260.003827
S90V90FGttTtt33B.1.1600.000094
S90V90FGttTtt33B.1.2580.0002
S90V90FGttTtt33B.1.3510.000089
S90V90FGttTtt33B.1.360.000438
S90V90FGttTtt33B.1.4160.003807
S90V90FGttTtt33B.1.5960.000261
S90V90FGttTtt22AY.1000.000092
S90V90FGttTtt22AY.1020.000053
S90V90FGttTtt22AY.1190.000071
S90V90FGttTtt22AY.1210.000271
S90V90FGttTtt22AY.420.00008
S90V90FGttTtt22AY.450.000243
S90V90FGttTtt22AY.46.60.000144
S90V90FGttTtt22AY.510.001818
S90V90FGttTtt22AY.610.00021
S90V90FGttTtt22AY.740.000231
S90V90FGttTtt22B.1.1.2140.000111
S90V90FGttTtt22B.1.1.2280.006098
S90V90FGttTtt22B.1.1.3060.000877
S90V90FGttTtt22B.1.1.3110.000716
S90V90FGttTtt22B.1.1.3980.006452
S90V90FGttTtt22B.1.160.200.017857
S90V90FGttTtt22B.1.177.430.002954
S90V90FGttTtt22B.1.177.70.00033
S90V90FGttTtt22B.1.2340.000264
S90V90FGttTtt22B.1.36.290.001035
S90V90FGttTtt22B.1.4290.000047
S90V90FGttTtt22B.1.617.10.000258
S90V90FGttTtt22N.40.008511
S90V90FGttTtt22P.1.140.000096
S90V90FGttTtt22Q.40.00091
S90V90FGttTtt22Q.80.00033
S90V90FGttTtt11A0.000387
S90V90FGttTtt11AD.20.000219
S90V90FGttTtt11AY.1090.00074
S90V90FGttTtt11AY.1100.000113
S90V90FGttTtt11AY.1170.000085
S90V90FGttTtt11AY.200.000039
S90V90FGttTtt11AY.230.00007
S90V90FGttTtt11AY.350.000233
S90V90FGttTtt11AY.39.10.00004
S90V90FGttTtt11AY.400.000964
S90V90FGttTtt11AY.46.50.000198
S90V90FGttTtt11AY.470.000031
S90V90FGttTtt11AY.520.000814
S90V90FGttTtt11AY.530.000288
S90V90FGttTtt11AY.540.000095
S90V90FGttTtt11AY.620.000436
S90V90FGttTtt11AY.650.000533
S90V90FGttTtt11AY.7.10.000113
S90V90FGttTtt11AY.750.000056
S90V90FGttTtt11AY.90.000068
S90V90FGttTtt11AY.9.20.000037
S90V90FGttTtt11AY.970.001701
S90V90FGttTtt11AZ.20.000821
S90V90FGttTtt11B.1.1.1570.000913
S90V90FGttTtt11B.1.1.1980.001468
S90V90FGttTtt11B.1.1.2200.001859
S90V90FGttTtt11B.1.1.270.00565
S90V90FGttTtt11B.1.1.2700.010309
S90V90FGttTtt11B.1.1.2770.000759
S90V90FGttTtt11B.1.1.30.008696
S90V90FGttTtt11B.1.1.340.013158
S90V90FGttTtt11B.1.1.3720.000689
S90V90FGttTtt11B.1.1.3850.004464
S90V90FGttTtt11B.1.1.4340.000349
S90V90FGttTtt11B.1.1.500.000679
S90V90FGttTtt11B.1.1.5210.005348
S90V90FGttTtt11B.1.1.5260.003546
S90V90FGttTtt11B.1.1040.00369
S90V90FGttTtt11B.1.1280.000635
S90V90FGttTtt11B.1.160.160.000929
S90V90FGttTtt11B.1.177.310.011494
S90V90FGttTtt11B.1.177.450.000381
S90V90FGttTtt11B.1.177.540.000606
S90V90FGttTtt11B.1.177.750.001041
S90V90FGttTtt11B.1.214.20.0006
S90V90FGttTtt11B.1.2370.004975
S90V90FGttTtt11B.1.2400.000216
S90V90FGttTtt11B.1.2430.00007
S90V90FGttTtt11B.1.3110.000275
S90V90FGttTtt11B.1.3250.006897
S90V90FGttTtt11B.1.3360.002439
S90V90FGttTtt11B.1.36.80.001
S90V90FGttTtt11B.1.3610.001289
S90V90FGttTtt11B.1.3690.000285
S90V90FGttTtt11B.1.3890.001002
S90V90FGttTtt11B.1.438.10.000107
S90V90FGttTtt11B.1.4480.002625
S90V90FGttTtt11B.1.4560.003268
S90V90FGttTtt11B.1.4990.00105
S90V90FGttTtt11B.1.5750.000303
S90V90FGttTtt11B.1.6210.000089
S90V90FGttTtt11B.1.6330.041667
S90V90FGttTtt11B.1.6370.000073
S90V90FGttTtt11B.400.000364
S90V90FGttTtt11C.110.010638
S90V90FGttTtt11C.350.000774
S90V90FGttTtt11C.360.000911
S90V90FGttTtt11C.370.000116
S90V90FGttTtt11C.37.10.002618
S90V90FGttTtt11N.90.005952
S90V90FGttTtt11P.20.000187
S90V90FGttTtt11P.60.003145