CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = V3V

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S3V3VsyngtTgtC4572590.5667421569-21571
S3V3VsyngtTgtG4571870.4091921569-21571
S3V3VsyngtTgtA457110.0240721569-21571

Details of the mutation V3V within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S3V3VgtTgtC259457All0.00005
S3V3VgtTgtG187457All0.000036
S3V3VgtTgtA11457All0.000002
S3V3VgtTgtC220229B.1.1.70.000197
S3V3VgtTgtG7229B.1.1.70.000006
S3V3VgtTgtA2229B.1.1.70.000002
S3V3VgtTgtG9898B.1.1.700.033424
S3V3VgtTgtG4040B.1.5260.00094
S3V3VgtTgtG910AY.250.000054
S3V3VgtTgtC110AY.250.000006
S3V3VgtTgtG67B.1.20.000053
S3V3VgtTgtC17B.1.20.000009
S3V3VgtTgtG56AY.290.000079
S3V3VgtTgtC16AY.290.000016
S3V3VgtTgtG46B.10.000037
S3V3VgtTgtC26B.10.000018
S3V3VgtTgtC35B.1.617.20.000011
S3V3VgtTgtG25B.1.617.20.000008
S3V3VgtTgtC34B.1.10.000054
S3V3VgtTgtG14B.1.10.000018
S3V3VgtTgtC44C.370.000464
S3V3VgtTgtG23AY.30.00002
S3V3VgtTgtC13AY.30.00001
S3V3VgtTgtC23AY.40.000003
S3V3VgtTgtA13AY.40.000002
S3V3VgtTgtG33AY.440.000018
S3V3VgtTgtC33AY.46.60.000217
S3V3VgtTgtC33P.10.000047
S3V3VgtTgtA220.111111
S3V3VgtTgtC12AY.1030.000006
S3V3VgtTgtA12AY.1030.000006
S3V3VgtTgtC22B.1.1.460.008734
S3V3VgtTgtA22B.1.1.5190.000079
S3V3VgtTgtG12B.1.1600.000031
S3V3VgtTgtC12B.1.1600.000031
S3V3VgtTgtG22B.1.1770.000026
S3V3VgtTgtC22B.1.2430.000139
S3V3VgtTgtG11A.20.000662
S3V3VgtTgtG11A.2.20.001689
S3V3VgtTgtC11A.50.001923
S3V3VgtTgtC11AY.1210.000135
S3V3VgtTgtG11AY.230.00007
S3V3VgtTgtG11AY.4.20.000022
S3V3VgtTgtA11AY.4.2.10.000149
S3V3VgtTgtC11AY.50.000021
S3V3VgtTgtA11AY.5.30.000337
S3V3VgtTgtA11AY.690.000187
S3V3VgtTgtC11B.1.1.2140.000055
S3V3VgtTgtC11B.1.1.3060.000438
S3V3VgtTgtC11B.1.1.3170.000412
S3V3VgtTgtG11B.1.160.290.004219
S3V3VgtTgtC11B.1.4270.00005
S3V3VgtTgtG11B.1.5610.000397
S3V3VgtTgtG11B.1.6090.000479
S3V3VgtTgtC11B.400.000364
S3V3VgtTgtC11Q.10.000126