CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = V143del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S143V143deldelGTT---80418041121989-21991

Details of the mutation V143del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S143V143delGTT---80418041All0.001538
S143V143delGTT---15921592A.2.50.794411
S143V143delGTT---14761476B.1.1.70.001321
S143V143delGTT---583583P.30.929825
S143V143delGTT---508508A.2.5.20.798742
S143V143delGTT---350350B.1.4290.008235
S143V143delGTT---292292AY.40.000454
S143V143delGTT---286286P.10.004506
S143V143delGTT---199199B.1.6370.014541
S143V143delGTT---171171A.2.5.10.822115
S143V143delGTT---160160AT.10.820513
S143V143delGTT---149149B.10.001365
S143V143delGTT---111111B.1.3510.0033
S143V143delGTT---105105B.1.1770.001383
S143V143delGTT---102102C.380.822581
S143V143delGTT---9999B.1.20.000872
S143V143delGTT---9393B.1.5260.002186
S143V143delGTT---9292A.2.5.30.948454
S143V143delGTT---7979B.1.10.001433
S143V143delGTT---5555AY.430.000244
S143V143delGTT---4747B.1.1600.001466
S143V143delGTT---4646B.1.1.5240.958333
S143V143delGTT---4444B.1.6350.77193
S143V143delGTT---3838AY.250.000229
S143V143delGTT---3737AY.1030.00023
S143V143delGTT---3737P.50.506849
S143V143delGTT---3232N.100.941176
S143V143delGTT---3232P.1.140.00153
S143V143delGTT---3030AY.1020.000795
S143V143delGTT---3030Q.30.004351
S143V143delGTT---2929AY.260.000821
S143V143delGTT---2929P.1.31
S143V143delGTT---2727B.1.258.170.002807
S143V143delGTT---2525B.1.2580.001664
S143V143delGTT---2424P.1.150.005576
S143V143delGTT---2222B.1.1.5190.000874
S143V143delGTT---2121B.1.5760.019039
S143V143delGTT---2020AY.440.000122
S143V143delGTT---1919AY.1000.000874
S143V143delGTT---1919B.1.2210.00135
S143V143delGTT---1818B.1.438.10.001931
S143V143delGTT---1717B.1.6210.001505
S143V143delGTT---1616AY.4.20.000347
S143V143delGTT---1616B.1.1.370.003086
S143V143delGTT---1616B.1.177.210.001224
S143V143delGTT---1616B.1.2340.002111
S143V143delGTT---1616B.1.4270.000808
S143V143delGTT---1515B.1.2430.001044
S143V143delGTT---1414B.1.617.20.000053
S143V143delGTT---1313AY.30.000129
S143V143delGTT---1313B.1.3690.003708
S143V143delGTT---1212B.1.1.2970.026846
S143V143delGTT---1212P.1.60.023346
S143V143delGTT---1111B.1.258.140.010784
S143V143delGTT---1010B.1.1.2980.008621
S143V143delGTT---1010B.1.1.3180.003018
S143V143delGTT---1010B.1.177.420.008945
S143V143delGTT---99B.1.6380.473684
S143V143delGTT---99P.1.100.002425
S143V143delGTT---99P.1.170.001456
S143V143delGTT---88B.1.5960.000697
S143V143delGTT---77AY.420.000282
S143V143delGTT---77AY.470.000218
S143V143delGTT---77B0.000895
S143V143delGTT---77B.1.1.280.002179
S143V143delGTT---77B.1.1.3680.021605
S143V143delGTT---77B.1.177.810.001325
S143V143delGTT---77B.1.351.30.006135
S143V143delGTT---77B.1.360.001021
S143V143delGTT---77B.1.4860.777778
S143V143delGTT---77B.1.5250.000792
S143V143delGTT---77B.1.5740.015054
S143V143delGTT---77B.1.617.10.000903
S143V143delGTT---77P.1.70.002235
S143V143delGTT---66A.10.001691
S143V143delGTT---66AY.290.000095
S143V143delGTT---66AY.330.000401
S143V143delGTT---66AY.390.000148
S143V143delGTT---66AY.4.2.10.000894
S143V143delGTT---66AY.460.000624
S143V143delGTT---66AY.98.10.000291
S143V143delGTT---66B.1.1.2140.000333
S143V143delGTT---66B.1.1.4340.002091
S143V143delGTT---66B.1.1280.003812
S143V143delGTT---66P.20.00112
S143V143delGTT---55AY.350.001165
S143V143delGTT---55AY.650.002665
S143V143delGTT---55AY.750.00028
S143V143delGTT---55B.1.1.2690.006766
S143V143delGTT---55B.1.1.2840.000537
S143V143delGTT---55B.1.177.40.001055
S143V143delGTT---55B.1.177.60.004883
S143V143delGTT---55B.1.258.110.001982
S143V143delGTT---55B.1.6280.001762
S143V143delGTT---55D.20.000375
S143V143delGTT---55P.1.10.001588
S143V143delGTT---55P.1.120.00242
S143V143delGTT---44A0.001548
S143V143delGTT---44AY.1200.000149
S143V143delGTT---44AY.4.40.001637
S143V143delGTT---44AY.50.000083
S143V143delGTT---44AY.740.000463
S143V143delGTT---44AY.75.10.000721
S143V143delGTT---44AY.9.20.000147
S143V143delGTT---44B.1.1.1590.018692
S143V143delGTT---44B.1.1.2180.030769
S143V143delGTT---44B.1.1.2320.00726
S143V143delGTT---44B.1.1.250.002274
S143V143delGTT---44B.1.1.2940.005063
S143V143delGTT---44B.1.1.3690.001785
S143V143delGTT---44B.1.1.500.002716
S143V143delGTT---44B.1.1.570.045977
S143V143delGTT---44B.1.177.580.005326
S143V143delGTT---44B.1.177.860.000734
S143V143delGTT---44B.1.2320.002149
S143V143delGTT---44B.1.3190.012195
S143V143delGTT---44B.1.351.20.00121
S143V143delGTT---44B.1.5610.001588
S143V143delGTT---44B.1.621.10.002023
S143V143delGTT---33A.20.001985
S143V143delGTT---33A.30.006289
S143V143delGTT---33AY.1010.001471
S143V143delGTT---33AY.1190.000106
S143V143delGTT---33AY.34.10.00153
S143V143delGTT---33AY.920.000862
S143V143delGTT---33B.1.1.2530.007519
S143V143delGTT---33B.1.1.2860.008696
S143V143delGTT---33B.1.1.3060.001315
S143V143delGTT---33B.1.1.3110.001074
S143V143delGTT---33B.1.1.330.001263
S143V143delGTT---33B.1.1.390.001529
S143V143delGTT---33B.1.1.630.001157
S143V143delGTT---33B.1.177.120.000455
S143V143delGTT---33B.1.177.160.001993
S143V143delGTT---33B.1.177.300.007538
S143V143delGTT---33B.1.177.50.003727
S143V143delGTT---33B.1.177.620.003576
S143V143delGTT---33B.1.177.730.001699
S143V143delGTT---33B.1.2400.000647
S143V143delGTT---33B.1.2410.002435
S143V143delGTT---33B.1.3200.003736
S143V143delGTT---33B.1.36.80.003
S143V143delGTT---33B.1.3670.002377
S143V143delGTT---33B.1.3890.003006
S143V143delGTT---33B.1.5650.002431
S143V143delGTT---33B.1.5750.00091
S143V143delGTT---33B.400.001093
S143V143delGTT---33P.1.20.003468
S143V143delGTT---33R.10.00027
S143V143delGTT---22AB.10.016393
S143V143delGTT---22AY.10.000791
S143V143delGTT---22AY.1060.00067
S143V143delGTT---22AY.1070.000932
S143V143delGTT---22AY.1080.002205
S143V143delGTT---22AY.120.000632
S143V143delGTT---22AY.1210.000271
S143V143delGTT---22AY.140.000176
S143V143delGTT---22AY.360.000296
S143V143delGTT---22AY.4.50.000215
S143V143delGTT---22AY.840.000875
S143V143delGTT---22AY.90.000135
S143V143delGTT---22AY.9.10.000167
S143V143delGTT---22AY.980.000158
S143V143delGTT---22AY.990.002099
S143V143delGTT---22AZ.20.001642
S143V143delGTT---22AZ.50.007018
S143V143delGTT---22B.1.1.100.00223
S143V143delGTT---22B.1.1.2200.003717
S143V143delGTT---22B.1.1.2410.004141
S143V143delGTT---22B.1.1.2630.003115
S143V143delGTT---22B.1.1.3160.00185
S143V143delGTT---22B.1.1.3720.001377
S143V143delGTT---22B.1.1.4640.002946
S143V143delGTT---22B.1.1.5280.009615
S143V143delGTT---22B.1.1.700.000682
S143V143delGTT---22B.1.110.30.001437
S143V143delGTT---22B.1.160.280.005848
S143V143delGTT---22B.1.177.440.001038
S143V143delGTT---22B.1.177.570.000562
S143V143delGTT---22B.1.177.70.00033
S143V143delGTT---22B.1.221.20.008032
S143V143delGTT---22B.1.221.40.008333
S143V143delGTT---22B.1.2390.002442
S143V143delGTT---22B.1.3110.000549
S143V143delGTT---22B.1.3240.00321
S143V143delGTT---22B.1.36.380.003284
S143V143delGTT---22B.1.3800.013245
S143V143delGTT---22B.1.3930.057143
S143V143delGTT---22B.1.3960.001411
S143V143delGTT---22B.1.4040.002604
S143V143delGTT---22B.1.4650.007605
S143V143delGTT---22B.1.5090.001732
S143V143delGTT---22B.1.5550.044444
S143V143delGTT---22B.1.5870.003795
S143V143delGTT---22B.1.5950.000522
S143V143delGTT---22B.1.6200.001892
S143V143delGTT---22B.1.6230.001073
S143V143delGTT---22B.1.6250.004706
S143V143delGTT---22B.1.930.001867
S143V143delGTT---22B.30.001661
S143V143delGTT---22C.160.002121
S143V143delGTT---22C.180.005181
S143V143delGTT---22C.300.003454
S143V143delGTT---22C.36.30.001134
S143V143delGTT---22C.36.3.10.005435
S143V143delGTT---22C.370.000232
S143V143delGTT---22L.30.007092
S143V143delGTT---22P.1.130.001797
S143V143delGTT---22P.1.160.000748
S143V143delGTT---22Q.40.00091
S143V143delGTT---22Q.70.002222
S143V143delGTT---11A.2.20.001689
S143V143delGTT---11A.23.10.000704
S143V143delGTT---11AC.10.037037
S143V143delGTT---11AD.20.000219
S143V143delGTT---11AE.80.000489
S143V143delGTT---11AK.10.012658
S143V143delGTT---11AU.30.00211
S143V143delGTT---11AY.1090.00074
S143V143delGTT---11AY.1130.000142
S143V143delGTT---11AY.1180.000063
S143V143delGTT---11AY.120.20.001285
S143V143delGTT---11AY.160.00038
S143V143delGTT---11AY.270.000065
S143V143delGTT---11AY.29.10.000221
S143V143delGTT---11AY.3.10.000085
S143V143delGTT---11AY.370.000316
S143V143delGTT---11AY.39.1.10.000725
S143V143delGTT---11AY.4.10.000737
S143V143delGTT---11AY.450.000122
S143V143delGTT---11AY.46.60.000072
S143V143delGTT---11AY.5.40.000277
S143V143delGTT---11AY.580.000907
S143V143delGTT---11AY.600.000938
S143V143delGTT---11AY.620.000436
S143V143delGTT---11AY.7.20.000559
S143V143delGTT---11AY.730.000665
S143V143delGTT---11AY.780.001541
S143V143delGTT---11AY.850.000427
S143V143delGTT---11AY.970.001701
S143V143delGTT---11AY.99.10.001553
S143V143delGTT---11B.1.1.1180.010204
S143V143delGTT---11B.1.1.1370.0125
S143V143delGTT---11B.1.1.1390.022727
S143V143delGTT---11B.1.1.1530.001095
S143V143delGTT---11B.1.1.1700.001247
S143V143delGTT---11B.1.1.1890.001513
S143V143delGTT---11B.1.1.2030.016949
S143V143delGTT---11B.1.1.2100.005714
S143V143delGTT---11B.1.1.2160.00089
S143V143delGTT---11B.1.1.2190.005
S143V143delGTT---11B.1.1.2290.005747
S143V143delGTT---11B.1.1.2400.004695
S143V143delGTT---11B.1.1.2580.003257
S143V143delGTT---11B.1.1.2650.003155
S143V143delGTT---11B.1.1.2660.012195
S143V143delGTT---11B.1.1.2670.010101
S143V143delGTT---11B.1.1.2790.001121
S143V143delGTT---11B.1.1.3440.010753
S143V143delGTT---11B.1.1.3480.000796
S143V143delGTT---11B.1.1.3970.002252
S143V143delGTT---11B.1.1.4010.066667
S143V143delGTT---11B.1.1.4020.011111
S143V143delGTT---11B.1.1.4090.002833
S143V143delGTT---11B.1.1.410.006329
S143V143delGTT---11B.1.1.4160.000905
S143V143delGTT---11B.1.1.4200.001006
S143V143delGTT---11B.1.1.4470.035714
S143V143delGTT---11B.1.1.530.013699
S143V143delGTT---11B.1.1.710.006061
S143V143delGTT---11B.1.1.890.006061
S143V143delGTT---11B.1.1050.009615
S143V143delGTT---11B.1.1110.001175
S143V143delGTT---11B.1.1130.015625
S143V143delGTT---11B.1.1260.001276
S143V143delGTT---11B.1.130.002375
S143V143delGTT---11B.1.1310.008772
S143V143delGTT---11B.1.1570.002985
S143V143delGTT---11B.1.160.230.004831
S143V143delGTT---11B.1.160.260.002421
S143V143delGTT---11B.1.160.270.015152
S143V143delGTT---11B.1.160.70.002079
S143V143delGTT---11B.1.160.80.001289
S143V143delGTT---11B.1.177.110.001698
S143V143delGTT---11B.1.177.330.001645
S143V143delGTT---11B.1.177.450.000381
S143V143delGTT---11B.1.177.500.004695
S143V143delGTT---11B.1.177.510.004566
S143V143delGTT---11B.1.177.540.000606
S143V143delGTT---11B.1.177.750.001041
S143V143delGTT---11B.1.177.760.002494
S143V143delGTT---11B.1.177.80.000752
S143V143delGTT---11B.1.177.830.001481
S143V143delGTT---11B.1.177.850.005435
S143V143delGTT---11B.1.177.870.000728
S143V143delGTT---11B.1.2220.001692
S143V143delGTT---11B.1.2230.002778
S143V143delGTT---11B.1.2370.004975
S143V143delGTT---11B.1.258.220.002667
S143V143delGTT---11B.1.2640.012346
S143V143delGTT---11B.1.2650.001271
S143V143delGTT---11B.1.2790.000514
S143V143delGTT---11B.1.2910.019231
S143V143delGTT---11B.1.30.002618
S143V143delGTT---11B.1.3140.007519
S143V143delGTT---11B.1.3320.003497
S143V143delGTT---11B.1.36.220.001208
S143V143delGTT---11B.1.36.310.001751
S143V143delGTT---11B.1.36.370.002778
S143V143delGTT---11B.1.370.014706
S143V143delGTT---11B.1.3910.001127
S143V143delGTT---11B.1.3990.001934
S143V143delGTT---11B.1.4000.000429
S143V143delGTT---11B.1.4150.014286
S143V143delGTT---11B.1.4160.001269
S143V143delGTT---11B.1.4330.003195
S143V143delGTT---11B.1.4620.007246
S143V143delGTT---11B.1.466.10.007194
S143V143delGTT---11B.1.4680.005714
S143V143delGTT---11B.1.4730.019231
S143V143delGTT---11B.1.4780.011765
S143V143delGTT---11B.1.4800.002488
S143V143delGTT---11B.1.4990.00105
S143V143delGTT---11B.1.517.10.005263
S143V143delGTT---11B.1.5270.003704
S143V143delGTT---11B.1.5320.006211
S143V143delGTT---11B.1.5390.017544
S143V143delGTT---11B.1.5510.00129
S143V143delGTT---11B.1.5670.003333
S143V143delGTT---11B.1.5770.000687
S143V143delGTT---11B.1.5820.000491
S143V143delGTT---11B.1.5850.027778
S143V143delGTT---11B.1.5880.00091
S143V143delGTT---11B.1.596.10.009346
S143V143delGTT---11B.1.6120.002653
S143V143delGTT---11B.1.6270.00202
S143V143delGTT---11B.1.910.002075
S143V143delGTT---11B.230.002924
S143V143delGTT---11B.310.003731
S143V143delGTT---11B.390.002331
S143V143delGTT---11B.520.010101
S143V143delGTT---11B.550.00295
S143V143delGTT---11B.6.60.000889
S143V143delGTT---11C.1.20.004255
S143V143delGTT---11C.230.005814
S143V143delGTT---11D.50.004975
S143V143delGTT---11P.1.110.010204
S143V143delGTT---11P.1.40.000977
S143V143delGTT---11Q.10.000126
S143V143delGTT---11Q.20.000613
S143V143delGTT---11Q.80.000165
S143V143delGTT---11S.10.00495
S143V143delGTT---11V.10.022727