CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = V1264L

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S1264V1264LnonsynGtgTtg70660615390.87091725352-25354
S1264V1264LnonsynGtgCtg7066091080.12889925352-25354
S1264V1264LnonsynGtGTtA7066060.000084913725352-25354
S1264V1264LnonsynGtGCtT7066050.000070761425352-25354
S1264V1264LnonsynGtGCtA7066020.000028304625352-25354

Details of the mutation V1264L within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S1264V1264LGtgTtg6153970660All0.01177
S1264V1264LGtgCtg910870660All0.001742
S1264V1264LGtGTtA670660All0.000001
S1264V1264LGtGCtT570660All0.000001
S1264V1264LGtGCtA270660All0
S1264V1264LGtgTtg3414934149AY.260.966764
S1264V1264LGtgTtg1180911809AY.230.823673
S1264V1264LGtgCtg79707998AY.4.20.172859
S1264V1264LGtgTtg267998AY.4.20.000564
S1264V1264LGtGCtT27998AY.4.20.000043
S1264V1264LGtgTtg23022467B.1.1.70.002061
S1264V1264LGtgCtg1602467B.1.1.70.000143
S1264V1264LGtGTtA52467B.1.1.70.000004
S1264V1264LGtgTtg23932393AY.23.10.998748
S1264V1264LGtgTtg16331908AY.40.002542
S1264V1264LGtgCtg2751908AY.40.000428
S1264V1264LGtgTtg13911391AY.650.741471
S1264V1264LGtgTtg12031345B.1.617.20.00453
S1264V1264LGtgCtg1421345B.1.617.20.000535
S1264V1264LGtgTtg504504AY.710.23943
S1264V1264LGtgTtg376390AY.440.002289
S1264V1264LGtgCtg14390AY.440.000085
S1264V1264LGtgTtg337337AY.90.02278
S1264V1264LGtgTtg303313AY.430.001342
S1264V1264LGtgCtg10313AY.430.000044
S1264V1264LGtgTtg300300AY.610.031433
S1264V1264LGtgTtg288290B.1.2580.019166
S1264V1264LGtgCtg2290B.1.2580.000133
S1264V1264LGtgCtg282286B.1.5950.073591
S1264V1264LGtgTtg4286B.1.5950.001044
S1264V1264LGtgTtg231246AY.250.001389
S1264V1264LGtgCtg15246AY.250.00009
S1264V1264LGtgTtg206222B.10.001887
S1264V1264LGtgCtg14222B.10.000128
S1264V1264LGtGCtA2222B.10.000018
S1264V1264LGtgTtg207208AY.60.008514
S1264V1264LGtgCtg1208AY.60.000041
S1264V1264LGtgTtg131196P.10.002064
S1264V1264LGtgCtg65196P.10.001024
S1264V1264LGtgTtg190194AY.1030.00118
S1264V1264LGtgCtg4194AY.1030.000025
S1264V1264LGtgTtg168170AY.75.10.030292
S1264V1264LGtgCtg2170AY.75.10.000361
S1264V1264LGtgTtg154155AY.1180.009648
S1264V1264LGtgCtg1155AY.1180.000063
S1264V1264LGtgTtg126147AY.1130.017941
S1264V1264LGtgCtg21147AY.1130.00299
S1264V1264LGtgTtg133136B.1.360.019405
S1264V1264LGtgCtg3136B.1.360.000438
S1264V1264LGtgTtg111128B.1.20.000977
S1264V1264LGtgCtg17128B.1.20.00015
S1264V1264LGtgTtg119125D.20.00893
S1264V1264LGtGCtT3125D.20.000225
S1264V1264LGtgCtg3125D.20.000225
S1264V1264LGtgTtg91123AY.30.000905
S1264V1264LGtgCtg32123AY.30.000318
S1264V1264LGtgTtg116118AY.1020.003076
S1264V1264LGtgCtg2118AY.1020.000053
S1264V1264LGtgTtg106106AB.10.868852
S1264V1264LGtgTtg101101B.1.617.10.013026
S1264V1264LGtgTtg8688AY.390.002125
S1264V1264LGtgCtg288AY.390.000049
S1264V1264LGtgTtg7071AY.160.026576
S1264V1264LGtgCtg171AY.160.00038
S1264V1264LGtgTtg6969AY.98.10.003342
S1264V1264LGtgTtg5858AY.750.003249
S1264V1264LGtgTtg5053B.1.10.000907
S1264V1264LGtgCtg353B.1.10.000054
S1264V1264LGtgTtg5252AY.1160.014913
S1264V1264LGtgTtg5050B.1.177.330.082237
S1264V1264LGtgTtg4144B.1.1600.001279
S1264V1264LGtgCtg344B.1.1600.000094
S1264V1264LGtgTtg4343B.1.2650.054638
S1264V1264LGtgTtg4343B.1.5260.001011
S1264V1264LGtgTtg3741B.1.1770.000487
S1264V1264LGtgCtg441B.1.1770.000053
S1264V1264LGtgTtg3839AY.46.20.024142
S1264V1264LGtGTtA139AY.46.20.000635
S1264V1264LGtgTtg3637AY.470.00112
S1264V1264LGtgCtg137AY.470.000031
S1264V1264LGtgTtg3636AY.99.20.003318
S1264V1264LGtgTtg3535B.1.1.4340.012199
S1264V1264LGtgTtg3535B.1.4270.001767
S1264V1264LGtgTtg3434C.360.030965
S1264V1264LGtgTtg3232AY.120.20.041131
S1264V1264LGtgTtg3232AY.50.000661
S1264V1264LGtgTtg3131R.10.00279
S1264V1264LGtgTtg3030AY.240.012931
S1264V1264LGtgTtg3030AY.290.000473
S1264V1264LGtgTtg3030AY.46.50.005952
S1264V1264LGtgTtg3030AY.980.00237
S1264V1264LGtgTtg2628AY.1190.000918
S1264V1264LGtgCtg228AY.1190.000071
S1264V1264LGtgTtg2828AY.420.001126
S1264V1264LGtgTtg2727AY.1110.004945
S1264V1264LGtgTtg2525AY.1050.016077
S1264V1264LGtgTtg2525B.1.3510.000743
S1264V1264LGtgTtg2424AY.620.010458
S1264V1264LGtgTtg2323C.350.017802
S1264V1264LGtgTtg2323Q.80.003793
S1264V1264LGtgTtg2122AY.1170.001775
S1264V1264LGtgCtg122AY.1170.000085
S1264V1264LGtgTtg2222B0.002812
S1264V1264LGtgTtg2020B.1.2430.001392
S1264V1264LGtgTtg1919AY.1200.000706
S1264V1264LGtgTtg1919AY.130.003059
S1264V1264LGtgTtg1919AY.360.002816
S1264V1264LGtgTtg1919B.1.1.2220.003876
S1264V1264LGtgTtg1818AY.1000.000828
S1264V1264LGtgTtg1718AY.200.000661
S1264V1264LGtgCtg118AY.200.000039
S1264V1264LGtgTtg1818AY.9.20.000661
S1264V1264LGtgTtg1718B.1.4290.0004
S1264V1264LGtgCtg118B.1.4290.000024
S1264V1264LGtgTtg1818P.1.140.00086
S1264V1264LGtgTtg1717AY.100.009009
S1264V1264LGtgTtg1717AY.340.001648
S1264V1264LGtgTtg1617AY.460.001665
S1264V1264LGtgCtg117AY.460.000104
S1264V1264LGtgTtg1616AY.46.60.001155
S1264V1264LGtgTtg1616AY.540.001526
S1264V1264LGtgTtg1616B.1.1.2140.000887
S1264V1264LGtgTtg1616B.1.1.3060.007014
S1264V1264LGtgTtg1616B.1.6210.001416
S1264V1264LGtgTtg1414B.1.36.240.08642
S1264V1264LGtgTtg1214C.370.001393
S1264V1264LGtgCtg214C.370.000232
S1264V1264LGtgTtg1313AY.1060.004354
S1264V1264LGtgTtg1313AY.730.008649
S1264V1264LGtgTtg1313B.1.6230.006974
S1264V1264LGtgTtg1313P.20.002426
S1264V1264LGtgTtg1212AY.1210.001624
S1264V1264LGtgTtg1212AY.450.00146
S1264V1264LGtgTtg1212AY.670.005571
S1264V1264LGtgTtg1212Q.10.001516
S1264V1264LGtgTtg1111B.1.2210.000781
S1264V1264LGtgTtg1111B.1.5250.001245
S1264V1264LGtgTtg1111B.1.5880.010009
S1264V1264LGtgTtg1010AY.16.10.004699
S1264V1264LGtgTtg910AY.270.000582
S1264V1264LGtgCtg110AY.270.000065
S1264V1264LGtgTtg810AY.330.000534
S1264V1264LGtgCtg210AY.330.000134
S1264V1264LGtgTtg1010AY.520.008143
S1264V1264LGtgTtg1010B.1.177.540.006064
S1264V1264LGtgTtg99AY.700.001877
S1264V1264LGtgTtg99AY.920.002585
S1264V1264LGtgTtg99AY.930.002458
S1264V1264LGtgTtg89B.1.466.20.00313
S1264V1264LGtgCtg19B.1.466.20.000391
S1264V1264LGtgTtg89B.1.5820.003925
S1264V1264LGtgCtg19B.1.5820.000491
S1264V1264LGtgTtg88B.1.4000.003432
S1264V1264LGtgTtg57AY.10.001979
S1264V1264LGtgCtg27AY.10.000791
S1264V1264LGtgTtg77AY.3.10.000597
S1264V1264LGtgTtg77AY.4.50.000752
S1264V1264LGtgCtg47AY.840.00175
S1264V1264LGtgTtg37AY.840.001312
S1264V1264LGtgTtg77B.1.1.1570.006393
S1264V1264LGtgTtg77B.1.1.280.002179
S1264V1264LGtgTtg77B.1.4690.025271
S1264V1264LGtgTtg77B.1.5400.067961
S1264V1264LGtgTtg77B.1.6370.000512
S1264V1264LGtgTtg66A.23.10.004225
S1264V1264LGtgTtg66AY.190.006842
S1264V1264LGtgTtg66AY.34.10.00306
S1264V1264LGtgTtg66AY.4.2.10.000894
S1264V1264LGtgTtg66AY.590.003178
S1264V1264LGtgTtg66AY.640.003571
S1264V1264LGtgTtg66AY.680.001642
S1264V1264LGtgTtg36B.1.1.250.001706
S1264V1264LGtgCtg36B.1.1.250.001706
S1264V1264LGtgTtg46B.1.1.5190.000159
S1264V1264LGtgCtg26B.1.1.5190.000079
S1264V1264LGtgTtg66B.1.1.700.002046
S1264V1264LGtgTtg66B.1.214.20.003597
S1264V1264LGtgTtg66B.1.351.30.005259
S1264V1264LGtgTtg66B.1.3980.017857
S1264V1264LGtgTtg66B.1.4710.016393
S1264V1264LGtgTtg45A.2.50.001996
S1264V1264LGtgCtg15A.2.50.000499
S1264V1264LGtgCtg35AY.1090.002219
S1264V1264LGtgTtg25AY.1090.001479
S1264V1264LGtgTtg55AY.140.00044
S1264V1264LGtgTtg55AY.39.10.000198
S1264V1264LGtgTtg55AY.4.30.004209
S1264V1264LGtgTtg55AY.46.30.004669
S1264V1264LGtgTtg55AY.740.000578
S1264V1264LGtgTtg55B.1.1.3010.005896
S1264V1264LGtgTtg45B.1.1.500.002716
S1264V1264LGtgCtg15B.1.1.500.000679
S1264V1264LGtgTtg45B.1.4160.005076
S1264V1264LGtgCtg15B.1.4160.001269
S1264V1264LGtgTtg55B.1.4480.013123
S1264V1264LGtgTtg55B.1.4780.058824
S1264V1264LGtgCtg45B.1.5770.002749
S1264V1264LGtgTtg15B.1.5770.000687
S1264V1264LGtgTtg55B.230.01462
S1264V1264LGtgTtg55N.50.008834
S1264V1264LGtgTtg35P.1.120.001452
S1264V1264LGtgCtg25P.1.120.000968
S1264V1264LGtgTtg44AY.1080.00441
S1264V1264LGtgTtg44AY.1140.000924
S1264V1264LGtgTtg44AY.370.001264
S1264V1264LGtgTtg34AY.400.002893
S1264V1264LGtgCtg14AY.400.000964
S1264V1264LGtgTtg44AY.5.10.015038
S1264V1264LGtgTtg34AY.5.40.00083
S1264V1264LGtgCtg14AY.5.40.000277
S1264V1264LGtgTtg44AY.880.003537
S1264V1264LGtgTtg44AY.9.10.000335
S1264V1264LGtgTtg44B.1.1.330.001684
S1264V1264LGtgTtg44B.1.1.50.033333
S1264V1264LGtgTtg34B.1.177.730.001699
S1264V1264LGtgCtg14B.1.177.730.000566
S1264V1264LGtgTtg44B.1.177.860.000734
S1264V1264LGtgTtg44B.1.4700.005618
S1264V1264LGtgTtg44B.1.575.10.009756
S1264V1264LGtgCtg24P.1.160.000748
S1264V1264LGtgTtg24P.1.160.000748
S1264V1264LGtgTtg33AY.1070.001398
S1264V1264LGtgTtg33AY.1100.000338
S1264V1264LGtgTtg33AY.380.001498
S1264V1264LGtgTtg33AY.4.40.001227
S1264V1264LGtgTtg33AY.480.001395
S1264V1264LGtgTtg33AY.490.009585
S1264V1264LGtgTtg33AY.5.30.001012
S1264V1264LGtgTtg33AY.550.002752
S1264V1264LGtgTtg33AY.580.002722
S1264V1264LGtgTtg33AY.780.004622
S1264V1264LGtgCtg23AY.910.001461
S1264V1264LGtgTtg13AY.910.00073
S1264V1264LGtgTtg33AZ.20.002463
S1264V1264LGtgTtg33B.1.1.3180.000905
S1264V1264LGtgTtg33B.1.1.4320.003797
S1264V1264LGtgTtg33B.1.1.770.125
S1264V1264LGtgTtg23B.1.177.600.000437
S1264V1264LGtgCtg13B.1.177.600.000218
S1264V1264LGtgTtg33B.1.177.810.000568
S1264V1264LGtgTtg33B.1.351.20.000908
S1264V1264LGtgTtg33B.1.36.260.008571
S1264V1264LGtgTtg33B.1.36.290.001552
S1264V1264LGtgCtg23B.1.438.10.000215
S1264V1264LGtgTtg13B.1.438.10.000107
S1264V1264LGtgCtg23C.36.30.001134
S1264V1264LGtgTtg13C.36.30.000567
S1264V1264LGtgTtg33P.1.100.000808
S1264V1264LGtgTtg33P.1.170.000485
S1264V1264LGtgTtg23P.1.70.000639
S1264V1264LGtgCtg13P.1.70.000319
S1264V1264LGtgTtg22A0.000774
S1264V1264LGtgTtg22A.230.021053
S1264V1264LGtgTtg22AD.20.000438
S1264V1264LGtgTtg22AU.20.004843
S1264V1264LGtgTtg22AY.116.10.000623
S1264V1264LGtgTtg22AY.120.10.000642
S1264V1264LGtgTtg22AY.350.000466
S1264V1264LGtgTtg22AY.46.40.000329
S1264V1264LGtgTtg22AY.600.001876
S1264V1264LGtgTtg22AY.70.000392
S1264V1264LGtgTtg22AY.7.10.000225
S1264V1264LGtgTtg22AY.7.20.001119
S1264V1264LGtgTtg22AY.860.00166
S1264V1264LGtgTtg22AY.890.009804
S1264V1264LGtgTtg22B.1.1.100.00223
S1264V1264LGtgTtg22B.1.1.2320.00363
S1264V1264LGtgTtg22B.1.1.2830.046512
S1264V1264LGtgTtg22B.1.1.630.000772
S1264V1264LGtgCtg22B.1.1.710.012121
S1264V1264LGtgTtg22B.1.177.770.001452
S1264V1264LGtgTtg22B.1.177.820.000955
S1264V1264LGtgTtg22B.1.3130.013158
S1264V1264LGtgTtg22B.1.3460.002621
S1264V1264LGtgTtg22B.1.36.170.000988
S1264V1264LGtgTtg22B.1.36.380.003284
S1264V1264LGtgTtg22B.1.3930.057143
S1264V1264LGtgTtg22B.1.5170.000854
S1264V1264LGtgTtg22B.1.5960.000174
S1264V1264LGtgTtg22B.1.6020.013072
S1264V1264LGtgTtg22B.1.6200.001892
S1264V1264LGtgTtg22B.6.60.001778
S1264V1264LGtgTtg22C.180.005181
S1264V1264LGtgTtg22C.400.055556
S1264V1264LGtgCtg12D.30.005917
S1264V1264LGtgTtg12D.30.005917
S1264V1264LGtgTtg12P.1.10.000318
S1264V1264LGtgCtg12P.1.10.000318
S1264V1264LGtgTtg110.055556
S1264V1264LGtgCtg11A.180.05
S1264V1264LGtgTtg11A.2.30.004739
S1264V1264LGtgTtg11AE.70.083333
S1264V1264LGtgTtg11AY.120.000316
S1264V1264LGtgTtg11AY.170.008197
S1264V1264LGtgTtg11AY.20.000356
S1264V1264LGtgTtg11AY.220.002092
S1264V1264LGtgTtg11AY.300.000396
S1264V1264LGtgTtg11AY.320.000532
S1264V1264LGtgTtg11AY.410.000294
S1264V1264LGtgTtg11AY.46.10.001027
S1264V1264LGtgTtg11AY.500.000799
S1264V1264LGtgTtg11AY.530.000288
S1264V1264LGtgTtg11AY.570.000656
S1264V1264LGtgTtg11AY.630.000387
S1264V1264LGtgTtg11AY.720.001361
S1264V1264LGtgTtg11AY.770.001127
S1264V1264LGtgTtg11AY.80.000606
S1264V1264LGtgTtg11AY.810.001992
S1264V1264LGtgCtg11AY.850.000427
S1264V1264LGtgTtg11AY.870.000833
S1264V1264LGtgTtg11AY.900.000684
S1264V1264LGtgTtg11AY.970.001701
S1264V1264LGtgTtg11B.1.1.10.000327
S1264V1264LGtgTtg11B.1.1.1590.004673
S1264V1264LGtgTtg11B.1.1.1700.001247
S1264V1264LGtgTtg11B.1.1.1740.003378
S1264V1264LGtgTtg11B.1.1.1890.001513
S1264V1264LGtgTtg11B.1.1.2700.010309
S1264V1264LGtgTtg11B.1.1.2770.000759
S1264V1264LGtgTtg11B.1.1.2790.001121
S1264V1264LGtgTtg11B.1.1.2840.000107
S1264V1264LGtgTtg11B.1.1.2910.000742
S1264V1264LGtgTtg11B.1.1.2990.012195
S1264V1264LGtgTtg11B.1.1.3020.002075
S1264V1264LGtgTtg11B.1.1.3170.000412
S1264V1264LGtgTtg11B.1.1.3480.000796
S1264V1264LGtgTtg11B.1.1.3690.000446
S1264V1264LGtgTtg11B.1.1.370.000193
S1264V1264LGtgTtg11B.1.1.3720.000689
S1264V1264LGtgTtg11B.1.1.390.00051
S1264V1264LGtgTtg11B.1.1.4310.016129
S1264V1264LGtgTtg11B.1.1.460.004367
S1264V1264LGtgTtg11B.1.1.5150.02
S1264V1264LGtgTtg11B.1.1.5280.004808
S1264V1264LGtgTtg11B.1.110.30.000718
S1264V1264LGtgTtg11B.1.1450.052632
S1264V1264LGtgTtg11B.1.177.160.000664
S1264V1264LGtgTtg11B.1.177.230.003236
S1264V1264LGtgCtg11B.1.177.270.009434
S1264V1264LGtgTtg11B.1.177.310.011494
S1264V1264LGtgTtg11B.1.177.40.000211
S1264V1264LGtgTtg11B.1.177.440.000519
S1264V1264LGtgTtg11B.1.177.460.000918
S1264V1264LGtgTtg11B.1.177.850.005435
S1264V1264LGtgTtg11B.1.1920.009259
S1264V1264LGtgCtg11B.1.2100.002132
S1264V1264LGtgTtg11B.1.2220.001692
S1264V1264LGtgTtg11B.1.2320.000537
S1264V1264LGtgTtg11B.1.2330.014085
S1264V1264LGtgTtg11B.1.2410.000812
S1264V1264LGtgTtg11B.1.2520.006623
S1264V1264LGtgTtg11B.1.258.170.000104
S1264V1264LGtgTtg11B.1.3350.010309
S1264V1264LGtgTtg11B.1.36.180.00042
S1264V1264LGtgCtg11B.1.36.270.000763
S1264V1264LGtgTtg11B.1.36.80.001
S1264V1264LGtgTtg11B.1.3620.001541
S1264V1264LGtgTtg11B.1.3630.012987
S1264V1264LGtgTtg11B.1.3670.000792
S1264V1264LGtgTtg11B.1.3690.000285
S1264V1264LGtgTtg11B.1.3770.004566
S1264V1264LGtgTtg11B.1.4010.008197
S1264V1264LGtgTtg11B.1.4280.00102
S1264V1264LGtgTtg11B.1.4340.052632
S1264V1264LGtgTtg11B.1.4560.003268
S1264V1264LGtgTtg11B.1.4590.004082
S1264V1264LGtgCtg11B.1.4670.04
S1264V1264LGtgTtg11B.1.4680.005714
S1264V1264LGtgTtg11B.1.4730.019231
S1264V1264LGtgTtg11B.1.4990.00105
S1264V1264LGtgTtg11B.1.5270.003704
S1264V1264LGtgTtg11B.1.5380.008065
S1264V1264LGtgTtg11B.1.5740.002151
S1264V1264LGtgTtg11B.1.5760.000907
S1264V1264LGtgTtg11B.1.6000.005848
S1264V1264LGtgTtg11B.1.6090.000479
S1264V1264LGtgTtg11B.1.6190.000871
S1264V1264LGtgTtg11B.1.6250.002353
S1264V1264LGtgTtg11B.1.6270.00202
S1264V1264LGtgTtg11B.1.6290.013333
S1264V1264LGtgTtg11B.1.910.002075
S1264V1264LGtgTtg11B.1.930.000934
S1264V1264LGtgTtg11B.370.028571
S1264V1264LGtgTtg11B.400.000364
S1264V1264LGtgTtg11B.520.010101
S1264V1264LGtgTtg11C.10.002392
S1264V1264LGtgTtg11D.50.004975
S1264V1264LGtgTtg11P.70.004367
S1264V1264LGtgTtg11Q.30.000145
S1264V1264LGtgTtg11W.10.008696