CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = T95del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S95T95del2delACt--t1170.63636421845-21847
S95T95del2delaCTa--1130.27272721845-21847
S95T95del2delACT--G1110.090909121845-21847

Details of the mutation T95del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S95T95del2ACt--t711All0.000001
S95T95del2aCTa--311All0.000001
S95T95del2ACT--G111All0
S95T95del2aCTa--11AY.1030.000006
S95T95del2aCTa--11AY.30.00001
S95T95del2ACt--t11AY.340.000097
S95T95del2ACt--t11AY.4.20.000022
S95T95del2ACt--t11AY.4.50.000107
S95T95del2ACt--t11AY.90.000068
S95T95del2ACt--t11B.1.10.000018
S95T95del2ACt--t11B.1.1.70.000001
S95T95del2aCTa--11B.1.1770.000013
S95T95del2ACt--t11B.1.177.100.000878
S95T95del2ACT--G11B.1.177.210.000076