CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = T95T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S95T95TsynacTacC2111020.48341221845-21847
S95T95TsynacTacA211850.40284421845-21847
S95T95TsynacTacG211240.11374421845-21847

Details of the mutation T95T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S95T95TacTacC102211All0.00002
S95T95TacTacA85211All0.000016
S95T95TacTacG24211All0.000005
S95T95TacTacC2239B.1.1.70.00002
S95T95TacTacA1339B.1.1.70.000012
S95T95TacTacG439B.1.1.70.000004
S95T95TacTacC2323B.1.2430.0016
S95T95TacTacA2020AY.120.006321
S95T95TacTacA1111AH.30.041825
S95T95TacTacC611B.10.000055
S95T95TacTacA511B.10.000046
S95T95TacTacC79AY.440.000043
S95T95TacTacG19AY.440.000006
S95T95TacTacA19AY.440.000006
S95T95TacTacC89B.1.617.20.00003
S95T95TacTacA19B.1.617.20.000004
S95T95TacTacC47AY.430.000018
S95T95TacTacG27AY.430.000009
S95T95TacTacA17AY.430.000004
S95T95TacTacA57B.1.575.10.012195
S95T95TacTacC27B.1.575.10.004878
S95T95TacTacC77P.20.001306
S95T95TacTacA66AY.250.000036
S95T95TacTacG66B.1.177.400.030928
S95T95TacTacG45B.1.20.000035
S95T95TacTacA15B.1.20.000009
S95T95TacTacA34B.1.1.5190.000119
S95T95TacTacC14B.1.1.5190.00004
S95T95TacTacC33AY.260.000085
S95T95TacTacG12AY.30.00001
S95T95TacTacC12AY.30.00001
S95T95TacTacC22AY.90.000135
S95T95TacTacC22B.1.36.180.00084
S95T95TacTacG12B.1.4290.000024
S95T95TacTacC12B.1.4290.000024
S95T95TacTacA22B.1.5640.000852
S95T95TacTacA22B.1.6370.000146
S95T95TacTacG11AY.1070.000466
S95T95TacTacA11AY.1170.000085
S95T95TacTacA11AY.450.000122
S95T95TacTacC11AY.50.000021
S95T95TacTacC11AY.5.40.000277
S95T95TacTacC11AY.580.000907
S95T95TacTacC11AY.590.00053
S95T95TacTacC11AY.60.000041
S95T95TacTacA11AY.690.000187
S95T95TacTacC11AY.720.001361
S95T95TacTacA11AY.790.001211
S95T95TacTacA11AY.840.000437
S95T95TacTacC11AY.990.001049
S95T95TacTacA11B.1.1.3110.000358
S95T95TacTacG11B.1.1.3160.000925
S95T95TacTacA11B.1.1.3690.000446
S95T95TacTacA11B.1.160.290.004219
S95T95TacTacC11B.1.177.210.000076
S95T95TacTacA11B.1.177.430.001477
S95T95TacTacG11B.1.177.70.000165
S95T95TacTacC11B.1.2210.000071
S95T95TacTacA11B.1.2340.000132
S95T95TacTacC11B.1.2580.000067
S95T95TacTacG11B.1.360.000146
S95T95TacTacC11B.1.36.310.001751
S95T95TacTacC11B.1.4010.008197
S95T95TacTacA11B.1.4270.00005
S95T95TacTacC11B.1.5210.004975
S95T95TacTacA11B.1.617.10.000129
S95T95TacTacA11C.370.000116
S95T95TacTacA11Q.10.000126
S95T95TacTacG11Q.30.000145