CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = T95S

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S95T95SnonsynaCtaGt1291120.86821721845-21847
S95T95SnonsynActTct129170.13178321845-21847

Details of the mutation T95S within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S95T95SaCtaGt112129All0.000021
S95T95SActTct17129All0.000003
S95T95SaCtaGt2831B.1.1.70.000025
S95T95SActTct331B.1.1.70.000003
S95T95SaCtaGt2323B.1.20.000203
S95T95SaCtaGt67B.10.000055
S95T95SActTct17B.10.000009
S95T95SaCtaGt66AY.40.000009
S95T95SaCtaGt55B.1.617.20.000019
S95T95SaCtaGt44AY.250.000024
S95T95SaCtaGt33AY.1020.00008
S95T95SActTct33AY.700.000626
S95T95SaCtaGt33B.1.5960.000261
S95T95SActTct33B.60.00273
S95T95SaCtaGt22AY.1030.000012
S95T95SActTct22AY.430.000009
S95T95SaCtaGt22AY.440.000012
S95T95SaCtaGt22AY.50.000041
S95T95SaCtaGt22AY.99.20.000184
S95T95SActTct12B.1.10.000018
S95T95SaCtaGt12B.1.10.000018
S95T95SaCtaGt22B.1.360.000292
S95T95SaCtaGt12B.1.617.10.000129
S95T95SActTct12B.1.617.10.000129
S95T95SaCtaGt22P.1.70.000639
S95T95SaCtaGt22P.20.000373
S95T95SaCtaGt11AY.1130.000142
S95T95SaCtaGt11AY.1190.000035
S95T95SaCtaGt11AY.30.00001
S95T95SaCtaGt11AY.390.000025
S95T95SaCtaGt11AY.470.000031
S95T95SaCtaGt11AY.610.000105
S95T95SaCtaGt11AY.690.000187
S95T95SaCtaGt11AY.9.20.000037
S95T95SActTct11B.1.1.4200.001006
S95T95SaCtaGt11B.1.3320.003497
S95T95SaCtaGt11B.1.3510.00003
S95T95SaCtaGt11B.1.4000.000429
S95T95SaCtaGt11B.1.4090.000781
S95T95SaCtaGt11B.1.4270.00005
S95T95SaCtaGt11B.1.466.20.000391
S95T95SaCtaGt11B.1.4700.001404
S95T95SActTct11B.1.5680.001111
S95T95SaCtaGt11B.1.6370.000073
S95T95SaCtaGt11C.36.30.000567
S95T95SaCtaGt11P.10.000016
S95T95SActTct11R.10.00009