CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = T859del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S859T859del1delAct-ct1050.524137-24139
S859T859del1delacTac-1020.224137-24139
S859T859del1delaCta-t1010.124137-24139
S859T859del1delACtG-t1010.124137-24139
S859T859del1delACT-NG1010.124137-24139

Details of the mutation T859del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S859T859del1Act-ct510All0.000001
S859T859del1acTac-210All0
S859T859del1aCta-t110All0
S859T859del1ACT-NG110All0
S859T859del1ACtG-t110All0
S859T859del1Act-ct23B.1.1.70.000002
S859T859del1acTac-13B.1.1.70.000001
S859T859del1acTac-12AY.430.000004
S859T859del1ACT-NG12AY.430.000004
S859T859del1aCta-t11AY.160.00038
S859T859del1Act-ct11AY.40.000002
S859T859del1ACtG-t11AY.550.000917
S859T859del1Act-ct11B.1.780.008547
S859T859del1Act-ct11D.20.000075