CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = T716I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S716T716InonsynaCaaTa114718311471790.99999723708-23710
S716T716InonsynaCAaTT114718340.000003486823708-23710

Details of the mutation T716I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S716T716IaCaaTa11471791147183All0.219412
S716T716IaCAaTT41147183All0.000001
S716T716IaCaaTa11125091112511B.1.1.70.995944
S716T716IaCAaTT21112511B.1.1.70.000002
S716T716IaCaaTa78447844Q.10.990904
S716T716IaCaaTa68546854Q.30.994054
S716T716IaCaaTa31353135B.1.5750.951153
S716T716IaCaaTa22352235B.1.10.040545
S716T716IaCaaTa21752175Q.40.989086
S716T716IaCaaTa18631863B.10.017064
S716T716IaCaaTa16421642B.1.214.20.984412
S716T716IaCaaTa16231623Q.20.995706
S716T716IaCaaTa896896Q.70.995556
S716T716IaCaaTa657657AY.250.003952
S716T716IaCaaTa568568AY.40.000884
S716T716IaCaaTa396396B.1.575.10.965854
S716T716IaCaaTa323323Q.80.053265
S716T716IaCaaTa231231C.1.20.982979
S716T716IaCaaTa208208B.1.575.21
S716T716IaCaaTa196196B.1.3750.160656
S716T716IaCaaTa195195B.1.177.730.110419
S716T716IaCaaTa161161B.1.5760.145966
S716T716IaCaaTa151151Q.61
S716T716IaCaaTa146146B.1.20.001286
S716T716IaCaaTa136136B.1.214.30.971429
S716T716IaCaaTa135135B.1.1770.001778
S716T716IaCaaTa126126B.1.617.20.000474
S716T716IaCaaTa122122AY.50.002519
S716T716IaCaaTa109109B.1.214.40.990909
S716T716IaCaaTa100100AY.430.000443
S716T716IaCaaTa9595B.1.5960.008278
S716T716IaCaaTa9393B.1.1.3770.128453
S716T716IaCaaTa8383AY.390.002051
S716T716IaCaaTa8282B.1.5260.001927
S716T716IaCaaTa7979P.10.001245
S716T716IaCaaTa7777B.1.3510.002289
S716T716IaCaaTa7171B.1.2210.005043
S716T716IaCaaTa6767B.1.1.2050.249071
S716T716IaCaaTa5858Q.50.983051
S716T716IaCaaTa5757AY.440.000347
S716T716IaCaaTa5353B.1.177.70.008737
S716T716IaCaaTa5252B0.006646
S716T716IaCaaTa4545XA1
S716T716IaCaaTa4141AY.810.081673
S716T716IaCaaTa4040AY.1030.000248
S716T716IaCaaTa3737B.1.1.4090.104816
S716T716IaCaaTa3737B.1.4290.000871
S716T716IaCaaTa3434C.36.3.10.092391
S716T716IaCaaTa3333B.1.6090.01582
S716T716IaCaaTa3131B.1.1.5190.001231
S716T716IaCaaTa3131P.1.10.009848
S716T716IaCaaTa2929AY.1190.001024
S716T716IaCaaTa2929AY.60.001193
S716T716IaCaaTa2929B.1.4270.001464
S716T716IaCaaTa2828B.1.5950.007307
S716T716IaCaaTa2626AY.260.000736
S716T716IaCaaTa2525B.1.1600.00078
S716T716IaCaaTa2525B.1.438.10.002682
S716T716IaCaaTa2222B.1.80.043393
S716T716IaCaaTa2121AY.470.000653
S716T716IaCaaTa2121B.1.6230.011266
S716T716IaCaaTa2020B.1.258.170.002079
S716T716IaCaaTa1717B.1.2580.001131
S716T716IaCaaTa1717B.1.6200.016083
S716T716IaCaaTa1616B.1.1.1610.056537
S716T716IaCaaTa1616B.1.1.390.008155
S716T716IaCaaTa1616B.1.4970.005036
S716T716IaCaaTa1515B.1.1.2790.016816
S716T716IaCaaTa1515B.1.2140.054945
S716T716IaCaaTa1414AY.450.001704
S716T716IaCaaTa1414B.1.2100.029851
S716T716IaCaaTa1313AY.4.20.000282
S716T716IaCaaTa1313B.1.1.3170.005352
S716T716IaCaaTa1212AY.1020.000318
S716T716IaCaaTa1212AY.30.000119
S716T716IaCaaTa1212B.1.2430.000835
S716T716IaCaaTa1212P.1.160.004489
S716T716IaCaaTa9110.5
S716T716IaCAaTT2110.111111
S716T716IaCaaTa1111B.1.2400.002371
S716T716IaCaaTa1111C.36.30.006239
S716T716IaCaaTa1111P.1.170.001779
S716T716IaCaaTa1010AY.290.000158
S716T716IaCaaTa1010B.1.36.360.00602
S716T716IaCaaTa1010B.1.4110.037037
S716T716IaCaaTa1010P.1.150.002323
S716T716IaCaaTa99AY.1170.000761
S716T716IaCaaTa99AY.1180.000564
S716T716IaCaaTa99AY.140.000792
S716T716IaCaaTa99B.1.1.2200.016729
S716T716IaCaaTa99B.1.1.280.002801
S716T716IaCaaTa99B.1.1.890.054545
S716T716IaCaaTa99B.1.214.10.18
S716T716IaCaaTa88AY.720.010884
S716T716IaCaaTa88B.1.1.2910.005939
S716T716IaCaaTa88B.1.177.210.000612
S716T716IaCaaTa88P.1.120.003872
S716T716IaCaaTa77AY.1000.000322
S716T716IaCaaTa77AY.200.000272
S716T716IaCaaTa77AY.540.000667
S716T716IaCaaTa77AY.680.001916
S716T716IaCaaTa77B.1.1.2140.000388
S716T716IaCaaTa77B.1.1.2850.045752
S716T716IaCaaTa77B.1.1.4340.00244
S716T716IaCaaTa77B.1.1.500.004752
S716T716IaCaaTa77B.1.30.018325
S716T716IaCaaTa77B.1.351.50.004197
S716T716IaCaaTa77B.1.3670.005547
S716T716IaCaaTa77B.1.6370.000512
S716T716IaCaaTa66AY.3.10.000512
S716T716IaCaaTa66AY.750.000336
S716T716IaCaaTa66AY.90.000406
S716T716IaCaaTa66B.1.1.5280.028846
S716T716IaCaaTa66B.1.1390.004399
S716T716IaCaaTa66B.1.2220.010152
S716T716IaCaaTa55AY.1200.000186
S716T716IaCaaTa55AY.460.00052
S716T716IaCaaTa55AY.690.000933
S716T716IaCaaTa55AY.7.10.000564
S716T716IaCaaTa55B.1.1.2940.006329
S716T716IaCaaTa55B.1.1.3060.002192
S716T716IaCaaTa55B.1.1.5070.043478
S716T716IaCaaTa55B.1.177.310.057471
S716T716IaCaaTa55B.1.177.770.003631
S716T716IaCaaTa55B.1.2340.00066
S716T716IaCaaTa55B.1.3690.001426
S716T716IaCaaTa55B.1.4590.020408
S716T716IaCaaTa55B.1.4620.036232
S716T716IaCaaTa55B.1.5800.020325
S716T716IaCaaTa55C.370.00058
S716T716IaCaaTa44AA.70.036697
S716T716IaCaaTa44AY.230.000279
S716T716IaCaaTa44AY.300.001583
S716T716IaCaaTa44AY.75.10.000721
S716T716IaCaaTa44AY.950.003044
S716T716IaCaaTa44B.1.1.10.001307
S716T716IaCaaTa44B.1.1.100.004459
S716T716IaCaaTa44B.1.1.3010.004717
S716T716IaCaaTa44B.1.1.3120.007648
S716T716IaCaaTa44B.1.2370.0199
S716T716IaCaaTa44B.1.3300.114286
S716T716IaCaaTa44B.1.351.20.00121
S716T716IaCaaTa44B.1.5990.014599
S716T716IaCaaTa44B.1.617.10.000516
S716T716IaCaaTa44B.1.6190.003484
S716T716IaCaaTa44B.1.6210.000354
S716T716IaCaaTa44B.1.670.173913
S716T716IaCaaTa44P.1.10.10.03252
S716T716IaCaaTa44P.1.70.001277
S716T716IaCaaTa44R.10.00036
S716T716IaCaaTa33A0.001161
S716T716IaCaaTa33AY.190.003421
S716T716IaCaaTa33AY.340.000291
S716T716IaCaaTa33AY.360.000445
S716T716IaCaaTa33AY.46.40.000494
S716T716IaCaaTa33AY.46.50.000595
S716T716IaCaaTa33AY.530.000863
S716T716IaCaaTa33AY.610.000314
S716T716IaCaaTa33AY.730.001996
S716T716IaCaaTa33AY.850.001282
S716T716IaCaaTa33AY.9.20.00011
S716T716IaCaaTa33AY.980.000237
S716T716IaCaaTa33AY.98.10.000145
S716T716IaCaaTa33B.1.1.1410.006036
S716T716IaCaaTa33B.1.1.2840.000322
S716T716IaCaaTa33B.1.1.3180.000905
S716T716IaCaaTa33B.1.1.3700.037975
S716T716IaCaaTa33B.1.1.40.008929
S716T716IaCaaTa33B.1.1570.008955
S716T716IaCaaTa33B.1.177.40.000633
S716T716IaCaaTa33B.1.177.460.002755
S716T716IaCaaTa33B.1.177.820.001432
S716T716IaCaaTa33B.1.360.000438
S716T716IaCaaTa33B.1.3610.003866
S716T716IaCaaTa33B.1.5770.002062
S716T716IaCaaTa33B.1.621.10.001517
S716T716IaCaaTa33B.1.6280.001057
S716T716IaCaaTa33B.1.6340.010274
S716T716IaCaaTa33D.20.000225
S716T716IaCaaTa33P.1.60.005837
S716T716IaCaaTa22AY.1100.000225
S716T716IaCaaTa22AY.1110.000366
S716T716IaCaaTa22AY.120.000632
S716T716IaCaaTa22AY.120.10.000642
S716T716IaCaaTa22AY.1210.000271
S716T716IaCaaTa22AY.130.000322
S716T716IaCaaTa22AY.29.10.000441
S716T716IaCaaTa22AY.39.10.000079
S716T716IaCaaTa22AY.410.000588
S716T716IaCaaTa22AY.620.000871
S716T716IaCaaTa22AY.920.000575
S716T716IaCaaTa22B.1.1.2070.002364
S716T716IaCaaTa22B.1.1.2320.00363
S716T716IaCaaTa22B.1.1.2990.02439
S716T716IaCaaTa22B.1.1.3890.012121
S716T716IaCaaTa22B.1.1.3980.006452
S716T716IaCaaTa22B.1.1.4190.014815
S716T716IaCaaTa22B.1.1.4200.002012
S716T716IaCaaTa22B.1.1.4640.002946
S716T716IaCaaTa22B.1.1.5260.007092
S716T716IaCaaTa22B.1.1.560.035714
S716T716IaCaaTa22B.1.1.630.000772
S716T716IaCaaTa22B.1.160.160.001859
S716T716IaCaaTa22B.1.1700.008621
S716T716IaCaaTa22B.1.177.120.000303
S716T716IaCaaTa22B.1.177.420.001789
S716T716IaCaaTa22B.1.177.440.001038
S716T716IaCaaTa22B.1.177.600.000437
S716T716IaCaaTa22B.1.177.810.000379
S716T716IaCaaTa22B.1.2650.002541
S716T716IaCaaTa22B.1.3110.000549
S716T716IaCaaTa22B.1.36.290.001035
S716T716IaCaaTa22B.1.3800.013245
S716T716IaCaaTa22B.1.3960.001411
S716T716IaCaaTa22B.1.3990.003868
S716T716IaCaaTa22B.1.466.20.000782
S716T716IaCaaTa22B.1.5170.000854
S716T716IaCaaTa22B.1.5640.000852
S716T716IaCaaTa22B.1.5890.015152
S716T716IaCaaTa22B.1.6330.083333
S716T716IaCaaTa22B.1.6360.013423
S716T716IaCaaTa22B.60.00182
S716T716IaCaaTa22C.10.004785
S716T716IaCaaTa22C.350.001548
S716T716IaCaaTa22C.360.001821
S716T716IaCaaTa22N.50.003534
S716T716IaCaaTa22P.1.130.001797
S716T716IaCaaTa11A.2.20.001689
S716T716IaCaaTa11A.2.50.000499
S716T716IaCaaTa11A.2.5.10.004808
S716T716IaCaaTa11A.2.5.20.001572
S716T716IaCaaTa11A.270.001656
S716T716IaCaaTa11AA.10.007246
S716T716IaCaaTa11AE.80.000489
S716T716IaCaaTa11AT.10.005128
S716T716IaCaaTa11AU.20.002421
S716T716IaCaaTa11AY.10.000396
S716T716IaCaaTa11AY.160.00038
S716T716IaCaaTa11AY.16.10.00047
S716T716IaCaaTa11AY.240.000431
S716T716IaCaaTa11AY.330.000067
S716T716IaCaaTa11AY.34.10.00051
S716T716IaCaaTa11AY.4.30.000842
S716T716IaCaaTa11AY.4.50.000107
S716T716IaCaaTa11AY.420.00004
S716T716IaCaaTa11AY.46.60.000072
S716T716IaCaaTa11AY.5.40.000277
S716T716IaCaaTa11AY.520.000814
S716T716IaCaaTa11AY.550.000917
S716T716IaCaaTa11AY.650.000533
S716T716IaCaaTa11AY.70.000196
S716T716IaCaaTa11AY.700.000209
S716T716IaCaaTa11AY.740.000116
S716T716IaCaaTa11AY.790.001211
S716T716IaCaaTa11AY.9.10.000084
S716T716IaCaaTa11AY.910.00073
S716T716IaCaaTa11AY.990.001049
S716T716IaCaaTa11AZ.30.00152
S716T716IaCaaTa11B.1.1.1350.004695
S716T716IaCaaTa11B.1.1.1600.02381
S716T716IaCaaTa11B.1.1.1710.003676
S716T716IaCaaTa11B.1.1.1870.00885
S716T716IaCaaTa11B.1.1.2160.00089
S716T716IaCaaTa11B.1.1.2210.010101
S716T716IaCaaTa11B.1.1.2220.000204
S716T716IaCaaTa11B.1.1.2310.003096
S716T716IaCaaTa11B.1.1.2360.006897
S716T716IaCaaTa11B.1.1.2370.005405
S716T716IaCaaTa11B.1.1.2410.00207
S716T716IaCaaTa11B.1.1.250.000569
S716T716IaCaaTa11B.1.1.2690.001353
S716T716IaCaaTa11B.1.1.2770.000759
S716T716IaCaaTa11B.1.1.2800.003086
S716T716IaCaaTa11B.1.1.3070.002532
S716T716IaCaaTa11B.1.1.3110.000358
S716T716IaCaaTa11B.1.1.330.000421
S716T716IaCaaTa11B.1.1.340.013158
S716T716IaCaaTa11B.1.1.3480.000796
S716T716IaCaaTa11B.1.1.3680.003086
S716T716IaCaaTa11B.1.1.3690.000446
S716T716IaCaaTa11B.1.1.3720.000689
S716T716IaCaaTa11B.1.1.3740.002375
S716T716IaCaaTa11B.1.1.3750.011905
S716T716IaCaaTa11B.1.1.4020.011111
S716T716IaCaaTa11B.1.1.4040.015873
S716T716IaCaaTa11B.1.1.4070.041667
S716T716IaCaaTa11B.1.1.4160.000905
S716T716IaCaaTa11B.1.1.4320.001266
S716T716IaCaaTa11B.1.1.440.00241
S716T716IaCaaTa11B.1.1.4480.002033
S716T716IaCaaTa11B.1.1.5150.02
S716T716IaCaaTa11B.1.1.5240.020833
S716T716IaCaaTa11B.1.1.5250.005464
S716T716IaCaaTa11B.1.1.550.012987
S716T716IaCaaTa11B.1.1.700.000341
S716T716IaCaaTa11B.1.1.990.02381
S716T716IaCaaTa11B.1.1110.001175
S716T716IaCaaTa11B.1.160.140.002119
S716T716IaCaaTa11B.1.160.290.004219
S716T716IaCaaTa11B.1.177.150.000631
S716T716IaCaaTa11B.1.177.260.006993
S716T716IaCaaTa11B.1.177.410.0025
S716T716IaCaaTa11B.1.177.470.012987
S716T716IaCaaTa11B.1.177.520.001757
S716T716IaCaaTa11B.1.177.560.000668
S716T716IaCaaTa11B.1.177.650.000665
S716T716IaCaaTa11B.1.177.760.002494
S716T716IaCaaTa11B.1.177.80.000752
S716T716IaCaaTa11B.1.177.830.001481
S716T716IaCaaTa11B.1.177.860.000183
S716T716IaCaaTa11B.1.1790.003759
S716T716IaCaaTa11B.1.2390.001221
S716T716IaCaaTa11B.1.3130.006579
S716T716IaCaaTa11B.1.3360.002439
S716T716IaCaaTa11B.1.3490.000715
S716T716IaCaaTa11B.1.36.10.00114
S716T716IaCaaTa11B.1.36.100.004785
S716T716IaCaaTa11B.1.36.180.00042
S716T716IaCaaTa11B.1.36.260.002857
S716T716IaCaaTa11B.1.3630.012987
S716T716IaCaaTa11B.1.3770.004566
S716T716IaCaaTa11B.1.3820.008929
S716T716IaCaaTa11B.1.3910.001127
S716T716IaCaaTa11B.1.3930.028571
S716T716IaCaaTa11B.1.3970.004854
S716T716IaCaaTa11B.1.4040.001302
S716T716IaCaaTa11B.1.415.10.007576
S716T716IaCaaTa11B.1.416.10.001563
S716T716IaCaaTa11B.1.4220.000812
S716T716IaCaaTa11B.1.4280.00102
S716T716IaCaaTa11B.1.4330.003195
S716T716IaCaaTa11B.1.4670.04
S716T716IaCaaTa11B.1.4990.00105
S716T716IaCaaTa11B.1.5030.002488
S716T716IaCaaTa11B.1.5250.000113
S716T716IaCaaTa11B.1.5300.007143
S716T716IaCaaTa11B.1.5330.009615
S716T716IaCaaTa11B.1.5650.00081
S716T716IaCaaTa11B.1.5680.001111
S716T716IaCaaTa11B.1.5740.002151
S716T716IaCaaTa11B.1.5810.009434
S716T716IaCaaTa11B.1.5880.00091
S716T716IaCaaTa11B.1.6250.002353
S716T716IaCaaTa11B.1.6270.00202
S716T716IaCaaTa11B.1.780.008547
S716T716IaCaaTa11B.1.940.027027
S716T716IaCaaTa11B.350.007812
S716T716IaCaaTa11P.1.100.000269
S716T716IaCaaTa11P.1.140.000048