CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = T638T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S638T638TsynacAacG9975720.57372123474-23476
S638T638TsynacAacT9973350.33600823474-23476
S638T638TsynacAacC997900.090270823474-23476

Details of the mutation T638T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S638T638TacAacG572997All0.000109
S638T638TacAacT335997All0.000064
S638T638TacAacC90997All0.000017
S638T638TacAacG218343AY.40.000339
S638T638TacAacT124343AY.40.000193
S638T638TacAacC1343AY.40.000002
S638T638TacAacT108108B.1.177.40.022794
S638T638TacAacG85105B.1.1.70.000076
S638T638TacAacT19105B.1.1.70.000017
S638T638TacAacC1105B.1.1.70.000001
S638T638TacAacG7480AY.30.000736
S638T638TacAacT680AY.30.00006
S638T638TacAacC5959B.1.6280.020789
S638T638TacAacG3334AY.1030.000205
S638T638TacAacT134AY.1030.000006
S638T638TacAacT3131A.250.563636
S638T638TacAacG2331B.1.617.20.000087
S638T638TacAacT831B.1.617.20.00003
S638T638TacAacC2727AY.340.002618
S638T638TacAacG1920B.1.1770.00025
S638T638TacAacT120B.1.1770.000013
S638T638TacAacG1619B.10.000147
S638T638TacAacT319B.10.000027
S638T638TacAacG1616AY.3.10.001364
S638T638TacAacG1515AY.1100.00169
S638T638TacAacG612AY.440.000037
S638T638TacAacT612AY.440.000037
S638T638TacAacG1111AY.750.000616
S638T638TacAacG99AY.430.00004
S638T638TacAacG45AY.390.000099
S638T638TacAacT15AY.390.000025
S638T638TacAacT55B.1.1.5190.000199
S638T638TacAacT44AY.410.001176
S638T638TacAacG44B.1.1600.000125
S638T638TacAacG44B.1.360.000584
S638T638TacAacG23AY.250.000012
S638T638TacAacT13AY.250.000006
S638T638TacAacG23B.1.10.000036
S638T638TacAacT13B.1.10.000018
S638T638TacAacT23B.1.20.000018
S638T638TacAacG13B.1.20.000009
S638T638TacAacG33B.1.2430.000209
S638T638TacAacC220.111111
S638T638TacAacT22AY.1020.000053
S638T638TacAacT12AY.200.000039
S638T638TacAacG12AY.200.000039
S638T638TacAacG22AY.50.000041
S638T638TacAacG22AY.740.000231
S638T638TacAacG22B.1.1.1610.007067
S638T638TacAacG22B.1.1.630.000772
S638T638TacAacG22B.1.2210.000142
S638T638TacAacT12B.1.3510.00003
S638T638TacAacG12B.1.3510.00003
S638T638TacAacT11A.190.009434
S638T638TacAacT11AY.1090.00074
S638T638TacAacG11AY.1190.000035
S638T638TacAacG11AY.230.00007
S638T638TacAacT11AY.360.000148
S638T638TacAacT11AY.450.000122
S638T638TacAacT11AY.46.20.000635
S638T638TacAacT11AY.610.000105
S638T638TacAacG11AY.670.000464
S638T638TacAacG11AY.840.000437
S638T638TacAacG11AY.920.000287
S638T638TacAacG11B.1.1.100.001115
S638T638TacAacT11B.1.1.2220.000204
S638T638TacAacG11B.1.1.390.00051
S638T638TacAacG11B.1.1.4450.037037
S638T638TacAacG11B.1.177.120.000152
S638T638TacAacG11B.1.177.440.000519
S638T638TacAacG11B.1.220.001318
S638T638TacAacG11B.1.3110.000275
S638T638TacAacT11B.1.4290.000024
S638T638TacAacG11B.1.6270.00202
S638T638TacAacG11C.370.000116
S638T638TacAacT11P.10.000016
S638T638TacAacG11P.1.170.000162
S638T638TacAacT11P.1.17.10.000875