CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = T572T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S572T572TsynacTacC9218210.89142223276-23278
S572T572TsynacTacA921910.098805623276-23278
S572T572TsynacTacG92190.0097719923276-23278

Details of the mutation T572T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S572T572TacTacC821921All0.000157
S572T572TacTacA91921All0.000017
S572T572TacTacG9921All0.000002
S572T572TacTacC418418AY.4.20.009066
S572T572TacTacC161171B.1.1.70.000144
S572T572TacTacG7171B.1.1.70.000006
S572T572TacTacA3171B.1.1.70.000003
S572T572TacTacA3255AY.40.00005
S572T572TacTacC2355AY.40.000036
S572T572TacTacC3535AY.1030.000217
S572T572TacTacA2323AY.4.50.002472
S572T572TacTacC2223B.1.617.20.000083
S572T572TacTacA123B.1.617.20.000004
S572T572TacTacC1919AY.1000.000874
S572T572TacTacC1117AY.430.000049
S572T572TacTacA617AY.430.000027
S572T572TacTacC1515AY.440.000091
S572T572TacTacC1010B.1.1.280.003112
S572T572TacTacC99AY.50.000186
S572T572TacTacC78B.1.20.000062
S572T572TacTacA18B.1.20.000009
S572T572TacTacC88B.1.5260.000188
S572T572TacTacC55AY.1020.000133
S572T572TacTacA55AY.90.000338
S572T572TacTacC45B.1.10.000073
S572T572TacTacG15B.1.10.000018
S572T572TacTacC55C.370.00058
S572T572TacTacC44AY.190.004561
S572T572TacTacA44AY.80.002424
S572T572TacTacC44B.10.000037
S572T572TacTacC44B.1.2430.000278
S572T572TacTacC33AY.330.0002
S572T572TacTacC33AY.9.10.000251
S572T572TacTacA33B.1.1.720.090909
S572T572TacTacC33B.1.1770.00004
S572T572TacTacC33B.1.3560.005181
S572T572TacTacC22AY.1190.000071
S572T572TacTacA22AY.1200.000074
S572T572TacTacC22AY.230.000139
S572T572TacTacC22AY.30.00002
S572T572TacTacA22AY.580.001815
S572T572TacTacC22AY.980.000158
S572T572TacTacC22B.1.1.2070.002364
S572T572TacTacC22B.1.2140.007326
S572T572TacTacC22B.1.2210.000142
S572T572TacTacC22B.1.2580.000133
S572T572TacTacA22B.1.4270.000101
S572T572TacTacC22D.20.00015
S572T572TacTacC11AY.1050.000643
S572T572TacTacC11AY.1110.000183
S572T572TacTacC11AY.1180.000063
S572T572TacTacC11AY.1210.000135
S572T572TacTacC11AY.130.000161
S572T572TacTacC11AY.140.000088
S572T572TacTacA11AY.170.008197
S572T572TacTacC11AY.250.000006
S572T572TacTacC11AY.270.000065
S572T572TacTacG11AY.290.000016
S572T572TacTacC11AY.340.000097
S572T572TacTacC11AY.390.000025
S572T572TacTacC11AY.450.000122
S572T572TacTacC11AY.460.000104
S572T572TacTacC11AY.75.10.00018
S572T572TacTacC11AY.840.000437
S572T572TacTacA11AY.870.000833
S572T572TacTacC11AY.880.000884
S572T572TacTacC11AY.9.20.000037
S572T572TacTacC11AY.99.20.000092
S572T572TacTacA11AZ.50.003509
S572T572TacTacC11B0.000128
S572T572TacTacC11B.1.1.2220.000204
S572T572TacTacC11B.1.1.2360.006897
S572T572TacTacC11B.1.1.3060.000438
S572T572TacTacC11B.1.1.3180.000302
S572T572TacTacA11B.1.1.330.000421
S572T572TacTacC11B.1.2340.000132
S572T572TacTacA11B.1.360.000146
S572T572TacTacC11B.1.36.180.00042
S572T572TacTacC11B.1.4040.001302
S572T572TacTacC11B.1.4280.00102
S572T572TacTacC11B.1.4290.000024
S572T572TacTacA11B.1.5960.000087
S572T572TacTacA11B.1.5990.00365