CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = T549A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S549T549AnonsynAcaGca180180123207-23209

Details of the mutation T549A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S549T549AAcaGca180180All0.000034
S549T549AAcaGca8080B.1.1.2990.97561
S549T549AAcaGca3434B.1.1.70.00003
S549T549AAcaGca1414AY.1110.002564
S549T549AAcaGca88P.10.000126
S549T549AAcaGca77B.1.1600.000218
S549T549AAcaGca66B.1.617.20.000023
S549T549AAcaGca44AY.40.000006
S549T549AAcaGca33AY.260.000085
S549T549AAcaGca33B.1.20.000026
S549T549AAcaGca22AY.430.000009
S549T549AAcaGca22AY.640.00119
S549T549AAcaGca22B.10.000018
S549T549AAcaGca22B.1.2430.000139
S549T549AAcaGca11AY.1020.000027
S549T549AAcaGca11AY.1030.000006
S549T549AAcaGca11AY.250.000006
S549T549AAcaGca11AY.290.000016
S549T549AAcaGca11AY.4.20.000022
S549T549AAcaGca11AY.440.000006
S549T549AAcaGca11AY.5.40.000277
S549T549AAcaGca11AY.790.001211
S549T549AAcaGca11B.1.177.760.002494
S549T549AAcaGca11B.1.360.000146
S549T549AAcaGca11B.1.5250.000113
S549T549AAcaGca11B.1.617.10.000129
S549T549AAcaGca11R.20.014493