CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = T51T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S51T51TsynacTacG7424270.57547221713-21715
S51T51TsynacTacC7421790.2412421713-21715
S51T51TsynacTacA7421360.18328821713-21715

Details of the mutation T51T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S51T51TacTacG427742All0.000082
S51T51TacTacC179742All0.000034
S51T51TacTacA136742All0.000026
S51T51TacTacG139197B.1.617.20.000523
S51T51TacTacA50197B.1.617.20.000188
S51T51TacTacC8197B.1.617.20.00003
S51T51TacTacG160168AY.440.000974
S51T51TacTacC5168AY.440.00003
S51T51TacTacA3168AY.440.000018
S51T51TacTacG82145B.1.1.70.000073
S51T51TacTacA36145B.1.1.70.000032
S51T51TacTacC27145B.1.1.70.000024
S51T51TacTacC4368AY.40.000067
S51T51TacTacA1868AY.40.000028
S51T51TacTacG768AY.40.000011
S51T51TacTacA1221AY.250.000072
S51T51TacTacC721AY.250.000042
S51T51TacTacG221AY.250.000012
S51T51TacTacC1818B.1.3510.000535
S51T51TacTacG99B.1.1.700.00307
S51T51TacTacC88AY.1030.00005
S51T51TacTacA88AY.980.000632
S51T51TacTacC78B.1.20.000062
S51T51TacTacA18B.1.20.000009
S51T51TacTacC77AY.50.000145
S51T51TacTacG77P.1.80.033493
S51T51TacTacC46AY.1190.000141
S51T51TacTacG16AY.1190.000035
S51T51TacTacA16AY.1190.000035
S51T51TacTacC36AY.430.000013
S51T51TacTacG26AY.430.000009
S51T51TacTacA16AY.430.000004
S51T51TacTacC55B.1.4270.000252
S51T51TacTacC440.222222
S51T51TacTacG33AY.350.000699
S51T51TacTacC33AY.360.000445
S51T51TacTacC33AY.480.001395
S51T51TacTacC33B.1.2340.000396
S51T51TacTacG13P.10.000016
S51T51TacTacA13P.10.000016
S51T51TacTacC13P.10.000016
S51T51TacTacG22AY.1170.000169
S51T51TacTacC22AY.230.000139
S51T51TacTacC22AY.30.00002
S51T51TacTacG22B.10.000018
S51T51TacTacG22B.1.1600.000062
S51T51TacTacG12B.1.1770.000013
S51T51TacTacC12B.1.1770.000013
S51T51TacTacC22B.1.221.10.005814
S51T51TacTacC22B.1.2430.000139
S51T51TacTacC22B.1.4290.000047
S51T51TacTacG11AY.1020.000027
S51T51TacTacG11AY.16.10.00047
S51T51TacTacC11AY.23.10.000417
S51T51TacTacC11AY.290.000016
S51T51TacTacC11AY.320.000532
S51T51TacTacA11AY.330.000067
S51T51TacTacC11AY.390.000025
S51T51TacTacC11AY.4.20.000022
S51T51TacTacC11AY.420.00004
S51T51TacTacG11AY.460.000104
S51T51TacTacG11AY.46.60.000072
S51T51TacTacC11AY.5.30.000337
S51T51TacTacA11AY.730.000665
S51T51TacTacG11AY.740.000116
S51T51TacTacG11AY.750.000056
S51T51TacTacC11AY.790.001211
S51T51TacTacG11AY.90.000068
S51T51TacTacC11B.1.10.000018
S51T51TacTacC11B.1.160.180.007299
S51T51TacTacA11B.1.2360.002053
S51T51TacTacC11B.1.3670.000792
S51T51TacTacC11B.1.4050.012346
S51T51TacTacA11B.1.4090.000781
S51T51TacTacA11P.1.150.000232