CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = T478del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S478T478del1delaCaa-a16130.812522994-22996
S478T478del1delAca-ca1630.187522994-22996

Details of the mutation T478del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S478T478del1aCaa-a1316All0.000002
S478T478del1Aca-ca316All0.000001
S478T478del1aCaa-a22AY.160.000759
S478T478del1aCaa-a22AY.9.20.000073
S478T478del1aCaa-a22B.10.000018
S478T478del1Aca-ca22B.1.10.000036
S478T478del1aCaa-a22B.1.617.20.000008
S478T478del1aCaa-a11AY.46.60.000072
S478T478del1aCaa-a11AY.560.001605
S478T478del1aCaa-a11AY.610.000105
S478T478del1Aca-ca11B.1.1.70.000001
S478T478del1aCaa-a11B.1.2470.014925
S478T478del1aCaa-a11B.1.617.10.000129