CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = T478T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S478T478TsynacAacG47300.63829822994-22996
S478T478TsynacAacT47120.25531922994-22996
S478T478TsynacAacC4750.10638322994-22996

Details of the mutation T478T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S478T478TacAacG3047All0.000006
S478T478TacAacT1247All0.000002
S478T478TacAacC547All0.000001
S478T478TacAacT36B.1.1.70.000003
S478T478TacAacC26B.1.1.70.000002
S478T478TacAacG16B.1.1.70.000001
S478T478TacAacT34B.1.20.000026
S478T478TacAacG14B.1.20.000009
S478T478TacAacT44C.370.000464
S478T478TacAacG23B.10.000018
S478T478TacAacC13B.10.000009
S478T478TacAacG33B.1.1.3260.005282
S478T478TacAacG33B.1.1770.00004
S478T478TacAacG33B.1.5990.010949
S478T478TacAacG220.111111
S478T478TacAacG22B.1.1.3970.004505
S478T478TacAacG22B.1.1600.000062
S478T478TacAacG22B.1.214.20.001199
S478T478TacAacG11A.2.40.003367
S478T478TacAacG11B.1.10.000018
S478T478TacAacC11B.1.1.2160.00089
S478T478TacAacG11B.1.1.250.000569
S478T478TacAacG11B.1.1.2610.008621
S478T478TacAacG11B.1.1.3790.03125
S478T478TacAacT11B.1.177.440.000519
S478T478TacAacG11B.1.177.870.000728
S478T478TacAacT11B.1.351.30.000876
S478T478TacAacG11B.1.4290.000024
S478T478TacAacC11B.1.5260.000024
S478T478TacAacG11B.1.617.20.000004
S478T478TacAacG11P.1.170.000162