CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = T478I

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S478T478InonsynaCaaTa9539520.99895122994-22996
S478T478InonsynaCAaTC95310.0010493222994-22996

Details of the mutation T478I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S478T478IaCaaTa952953All0.000182
S478T478IaCAaTC1953All0
S478T478IaCaaTa540540B.1.1.70.000483
S478T478IaCaaTa110110B.1.1.30.956522
S478T478IaCaaTa9292B.1.1.2840.009881
S478T478IaCaaTa3333B.1.1770.000435
S478T478IaCaaTa2020P.10.000315
S478T478IaCaaTa1515B.1.6370.001096
S478T478IaCaaTa1213B.10.00011
S478T478IaCAaTC113B.10.000009
S478T478IaCaaTa1313B.1.10.000236
S478T478IaCaaTa1212B.1.20.000106
S478T478IaCaaTa99B.1.4290.000212
S478T478IaCaaTa66Q.80.000989
S478T478IaCaaTa55AY.1130.000712
S478T478IaCaaTa44B.1.3510.000119
S478T478IaCaaTa33AY.430.000013
S478T478IaCaaTa33AY.440.000018
S478T478IaCaaTa33AY.98.10.000145
S478T478IaCaaTa33B.1.2580.0002
S478T478IaCaaTa22AY.250.000012
S478T478IaCaaTa22AY.40.000003
S478T478IaCaaTa22AY.650.001066
S478T478IaCaaTa22AZ.50.007018
S478T478IaCaaTa22B.1.1.1530.002191
S478T478IaCaaTa22B.1.1.2140.000111
S478T478IaCaaTa22B.1.1600.000062
S478T478IaCaaTa22B.1.177.810.000379
S478T478IaCaaTa22B.1.4130.008511
S478T478IaCaaTa22B.1.5970.009259
S478T478IaCaaTa22P.1.10.000635
S478T478IaCaaTa22Q.30.00029
S478T478IaCaaTa11A.20.000662
S478T478IaCaaTa11A.2.40.003367
S478T478IaCaaTa11AD.20.000219
S478T478IaCaaTa11AE.80.000489
S478T478IaCaaTa11AY.1050.000643
S478T478IaCaaTa11AY.1180.000063
S478T478IaCaaTa11AY.30.00001
S478T478IaCaaTa11AY.470.000031
S478T478IaCaaTa11AY.50.000021
S478T478IaCaaTa11AY.7.20.000559
S478T478IaCaaTa11AY.9.20.000037
S478T478IaCaaTa11AY.99.20.000092
S478T478IaCaaTa11B0.000128
S478T478IaCaaTa11B.1.1.1280.007092
S478T478IaCaaTa11B.1.1.2220.000204
S478T478IaCaaTa11B.1.1.5230.001563
S478T478IaCaaTa11B.1.110.30.000718
S478T478IaCaaTa11B.1.120.008
S478T478IaCaaTa11B.1.1390.000733
S478T478IaCaaTa11B.1.1490.003425
S478T478IaCaaTa11B.1.177.450.000381
S478T478IaCaaTa11B.1.177.600.000218
S478T478IaCaaTa11B.1.2210.000071
S478T478IaCaaTa11B.1.2340.000132
S478T478IaCaaTa11B.1.351.10.038462
S478T478IaCaaTa11B.1.36.10.00114
S478T478IaCaaTa11B.1.36.260.002857
S478T478IaCaaTa11B.1.3750.00082
S478T478IaCaaTa11B.1.3960.000706
S478T478IaCaaTa11B.1.438.10.000107
S478T478IaCaaTa11B.1.4480.002625
S478T478IaCaaTa11B.1.5240.001406
S478T478IaCaaTa11B.1.5680.001111
S478T478IaCaaTa11B.1.5760.000907
S478T478IaCaaTa11B.1.5820.000491
S478T478IaCaaTa11B.1.5950.000261
S478T478IaCaaTa11B.1.617.20.000004
S478T478IaCaaTa11B.1.6210.000089
S478T478IaCaaTa11B.1.6280.000352
S478T478IaCaaTa11C.370.000116
S478T478IaCaaTa11P.1.110.010204
S478T478IaCaaTa11P.1.140.000048
S478T478IaCaaTa11P.1.150.000232
S478T478IaCaaTa11P.1.90.004808
S478T478IaCaaTa11W.10.008696