CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = T29del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S29T29del1delacTac-82800.9756121647-21649
S29T29del1delAct-ct8220.024390221647-21649

Details of the mutation T29del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S29T29del1acTac-8082All0.000015
S29T29del1Act-ct282All0
S29T29del1acTac-6667B.1.1.70.000059
S29T29del1Act-ct167B.1.1.70.000001
S29T29del1acTac-33B.1.177.820.001432
S29T29del1acTac-33B.1.3510.000089
S29T29del1acTac-22AY.520.001629
S29T29del1acTac-22B.1.1600.000062
S29T29del1acTac-11AY.1030.000006
S29T29del1acTac-11B.1.177.60.000977
S29T29del1acTac-11B.1.36.10.00114
S29T29del1Act-ct11P.1.120.000484
S29T29del1acTac-11R.10.00009