CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = T250T

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S250T250TsynacTacC5183690.71235522310-22312
S250T250TsynacTacA5181210.23359122310-22312
S250T250TsynacTacG518280.054054122310-22312

Details of the mutation T250T within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S250T250TacTacC369518All0.000071
S250T250TacTacA121518All0.000023
S250T250TacTacG28518All0.000005
S250T250TacTacC7792B.1.20.000678
S250T250TacTacG1392B.1.20.000114
S250T250TacTacA292B.1.20.000018
S250T250TacTacA4262B.1.1.70.000038
S250T250TacTacC1962B.1.1.70.000017
S250T250TacTacG162B.1.1.70.000001
S250T250TacTacC5151B.1.2210.003623
S250T250TacTacC4247B.1.10.000762
S250T250TacTacG547B.1.10.000091
S250T250TacTacC2929AY.50.000599
S250T250TacTacC2222AY.1030.000137
S250T250TacTacA1818B.1.1600.000561
S250T250TacTacA1818B.1.2580.001198
S250T250TacTacA1516AY.1020.000398
S250T250TacTacC116AY.1020.000027
S250T250TacTacC815B.1.617.20.00003
S250T250TacTacA715B.1.617.20.000026
S250T250TacTacA711AY.430.000031
S250T250TacTacG211AY.430.000009
S250T250TacTacC211AY.430.000009
S250T250TacTacC910AY.40.000014
S250T250TacTacA110AY.40.000002
S250T250TacTacC1010B.1.5960.000871
S250T250TacTacC89AY.440.000049
S250T250TacTacG19AY.440.000006
S250T250TacTacC88AY.200.000311
S250T250TacTacC77AY.46.20.004447
S250T250TacTacC67B.10.000055
S250T250TacTacA17B.10.000009
S250T250TacTacC56B.1.1770.000066
S250T250TacTacA16B.1.1770.000013
S250T250TacTacC55B.1.177.350.003455
S250T250TacTacC55B.1.2430.000348
S250T250TacTacC55B.1.5260.000118
S250T250TacTacC34AY.4.20.000065
S250T250TacTacG14AY.4.20.000022
S250T250TacTacC33AY.30.00003
S250T250TacTacC33B.1.6370.000219
S250T250TacTacC22AY.250.000012
S250T250TacTacC22AY.290.000032
S250T250TacTacC22AY.540.000191
S250T250TacTacC22AY.90.000135
S250T250TacTacC22AY.980.000158
S250T250TacTacC22B.1.2410.001623
S250T250TacTacC22B.1.2560.034483
S250T250TacTacC22B.1.3510.000059
S250T250TacTacG12P.10.000016
S250T250TacTacC12P.10.000016
S250T250TacTacA11A.20.000662
S250T250TacTacC11AY.1100.000113
S250T250TacTacA11AY.1140.000231
S250T250TacTacA11AY.1180.000063
S250T250TacTacA11AY.1210.000135
S250T250TacTacC11AY.230.00007
S250T250TacTacA11AY.23.10.000417
S250T250TacTacG11AY.39.10.00004
S250T250TacTacC11AY.420.00004
S250T250TacTacC11AY.480.000465
S250T250TacTacC11AY.60.000041
S250T250TacTacA11AY.610.000105
S250T250TacTacC11AY.70.000196
S250T250TacTacG11AY.700.000209
S250T250TacTacC11AY.740.000116
S250T250TacTacG11AY.750.000056
S250T250TacTacA11AY.840.000437
S250T250TacTacC11AY.9.10.000084
S250T250TacTacC11AY.920.000287
S250T250TacTacC11B0.000128
S250T250TacTacC11B.1.1.2220.000204
S250T250TacTacA11B.1.160.100.008065
S250T250TacTacC11B.1.177.70.000165
S250T250TacTacC11B.1.3320.003497
S250T250TacTacC11B.1.3750.00082
S250T250TacTacC11B.1.3780.006849
S250T250TacTacC11B.1.4290.000024
S250T250TacTacC11B.1.5800.004065
S250T250TacTacC11B.1.5900.004545
S250T250TacTacC11B.1.5950.000261
S250T250TacTacC11B.1.6190.000871
S250T250TacTacC11B.1.6210.000089
S250T250TacTacC11B.1.940.027027
S250T250TacTacC11B.400.000364
S250T250TacTacG11C.36.30.000567
S250T250TacTacA11D.20.000075
S250T250TacTacC11P.1.30.034483