CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = T20del

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S20T20deldelACC---151151121620-21622

Details of the mutation T20del within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S20T20delACC---151151All0.000029
S20T20delACC---2121AY.39.10.000832
S20T20delACC---1818B.1.1.70.000016
S20T20delACC---88AY.330.000534
S20T20delACC---77AY.590.003708
S20T20delACC---77B.1.10.000127
S20T20delACC---66AY.1030.000037
S20T20delACC---66B.1.5250.000679
S20T20delACC---66B.1.617.20.000023
S20T20delACC---55AY.40.000008
S20T20delACC---55AY.430.000022
S20T20delACC---55AY.440.00003
S20T20delACC---44AY.1200.000149
S20T20delACC---44AY.390.000099
S20T20delACC---44AY.750.000224
S20T20delACC---33AY.30.00003
S20T20delACC---33AY.75.10.000541
S20T20delACC---33P.10.000047
S20T20delACC---22AY.250.000012
S20T20delACC---22B.10.000018
S20T20delACC---22B.1.4290.000047
S20T20delACC---11A.2.40.003367
S20T20delACC---11AY.1000.000046
S20T20delACC---11AY.1010.00049
S20T20delACC---11AY.116.10.000311
S20T20delACC---11AY.290.000016
S20T20delACC---11AY.320.000532
S20T20delACC---11AY.420.00004
S20T20delACC---11AY.460.000104
S20T20delACC---11AY.540.000095
S20T20delACC---11AY.60.000041
S20T20delACC---11AY.680.000274
S20T20delACC---11AY.9.20.000037
S20T20delACC---11AY.980.000079
S20T20delACC---11B.1.1.3060.000438
S20T20delACC---11B.1.1.3150.008475
S20T20delACC---11B.1.1.4010.066667
S20T20delACC---11B.1.1.460.004367
S20T20delACC---11B.1.177.60.000977
S20T20delACC---11B.1.177.680.015152
S20T20delACC---11B.1.177.830.001481
S20T20delACC---11B.1.20.000009
S20T20delACC---11B.1.2210.000071
S20T20delACC---11B.1.3510.00003
S20T20delACC---11B.1.360.000146
S20T20delACC---11B.1.4270.00005
S20T20delACC---11B.1.4970.000315
S20T20delACC---11B.1.5260.000024
S20T20delACC---11B.1.6200.000946
S20T20delACC---11B.610.005747
S20T20delACC---11C.36.30.000567