CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = T20N

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S20T20NnonsynaCcaAc1124791122700.99814221620-21622
S20T20NnonsynaCCaAT1124792090.0018581221620-21622

Details of the mutation T20N within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S20T20NaCcaAc112270112479All0.021473
S20T20NaCCaAT209112479All0.00004
S20T20NaCcaAc6140361537P.10.967342
S20T20NaCCaAT13461537P.10.002111
S20T20NaCcaAc2082020830P.1.140.99522
S20T20NaCCaAT1020830P.1.140.000478
S20T20NaCcaAc60686069P.1.170.981559
S20T20NaCCaAT16069P.1.170.000162
S20T20NaCcaAc42054211P.1.150.976998
S20T20NaCCaAT64211P.1.150.001394
S20T20NaCcaAc36543660P.1.100.98464
S20T20NaCCaAT63660P.1.100.001617
S20T20NaCcaAc30903101P.1.70.98659
S20T20NaCCaAT113101P.1.70.003512
S20T20NaCcaAc29452948P.1.10.935515
S20T20NaCCaAT32948P.1.10.000953
S20T20NaCcaAc25222550P.1.160.943509
S20T20NaCCaAT282550P.1.160.010475
S20T20NaCcaAc17891793P.1.120.865924
S20T20NaCCaAT41793P.1.120.001936
S20T20NaCcaAc11411141P.1.17.10.99825
S20T20NaCcaAc10791079P.1.130.969452
S20T20NaCcaAc10171022P.1.40.993164
S20T20NaCCaAT51022P.1.40.004883
S20T20NaCcaAc856856P.1.20.989595
S20T20NaCcaAc512512P.1.60.996109
S20T20NaCcaAc208208P.1.80.995215
S20T20NaCcaAc204204P.1.90.980769
S20T20NaCcaAc106106P.1.10.10.861789
S20T20NaCcaAc9898P.1.111
S20T20NaCcaAc7878B.10.000714
S20T20NaCcaAc6465B.1.1.70.000057
S20T20NaCCaAT165B.1.1.70.000001
S20T20NaCcaAc5050B.1.10.000907
S20T20NaCcaAc2929B.1.4970.009128
S20T20NaCcaAc2929P.1.31
S20T20NaCcaAc2828B.1.617.20.000105
S20T20NaCcaAc2525B.1.1.5280.120192
S20T20NaCcaAc2424P.1.10.21
S20T20NaCcaAc2121B.1.1.280.006536
S20T20NaCcaAc2121C.370.002437
S20T20NaCcaAc1515AY.430.000066
S20T20NaCcaAc1414Q.10.001769
S20T20NaCcaAc1313P.1.51
S20T20NaCcaAc99AY.1030.000056
S20T20NaCcaAc99P.20.00168
S20T20NaCcaAc88AY.40.000012
S20T20NaCcaAc55AY.290.000079
S20T20NaCcaAc55AY.440.00003
S20T20NaCcaAc55B.1.5960.000436
S20T20NaCcaAc44AY.200.000155
S20T20NaCcaAc44B.1.1.1610.014134
S20T20NaCcaAc44B.1.6210.000354
S20T20NaCcaAc44B.1.6360.026846
S20T20NaCcaAc33AY.390.000074
S20T20NaCcaAc33B.1.1.3480.002389
S20T20NaCcaAc33B.1.1.5190.000119
S20T20NaCcaAc33B.1.3510.000089
S20T20NaCcaAc33B.1.6000.017544
S20T20NaCcaAc22A.2.50.000998
S20T20NaCcaAc22AY.1020.000053
S20T20NaCcaAc22AY.230.000139
S20T20NaCcaAc22AY.450.000243
S20T20NaCcaAc22AY.670.000929
S20T20NaCcaAc22AY.9.20.000073
S20T20NaCcaAc22AY.99.20.000184
S20T20NaCcaAc22B.1.1.3320.0625
S20T20NaCcaAc22B.1.177.730.001133
S20T20NaCcaAc22B.1.36.270.001527
S20T20NaCcaAc22B.1.3690.00057
S20T20NaCcaAc22B.1.5170.000854
S20T20NaCcaAc22B.1.5260.000047
S20T20NaCcaAc22C.37.10.005236
S20T20NaCcaAc11AY.1000.000046
S20T20NaCcaAc11AY.250.000006
S20T20NaCcaAc11AY.260.000028
S20T20NaCcaAc11AY.30.00001
S20T20NaCcaAc11AY.34.10.00051
S20T20NaCcaAc11AY.420.00004
S20T20NaCcaAc11AY.5.30.000337
S20T20NaCcaAc11AY.680.000274
S20T20NaCcaAc11AY.980.000079
S20T20NaCcaAc11AY.98.10.000048
S20T20NaCcaAc11B0.000128
S20T20NaCcaAc11B.1.1.1170.009709
S20T20NaCcaAc11B.1.1.2200.001859
S20T20NaCcaAc11B.1.1.2360.006897
S20T20NaCcaAc11B.1.1.330.000421
S20T20NaCcaAc11B.1.1.390.00051
S20T20NaCcaAc11B.1.1770.000013
S20T20NaCcaAc11B.1.177.310.011494
S20T20NaCcaAc11B.1.177.70.000165
S20T20NaCcaAc11B.1.177.860.000183
S20T20NaCcaAc11B.1.20.000009
S20T20NaCcaAc11B.1.2140.003663
S20T20NaCcaAc11B.1.3110.000275
S20T20NaCcaAc11B.1.3490.000715
S20T20NaCcaAc11B.1.36.290.000517
S20T20NaCcaAc11B.1.3750.00082
S20T20NaCcaAc11B.1.3990.001934
S20T20NaCcaAc11B.1.4150.014286
S20T20NaCcaAc11B.1.4290.000024
S20T20NaCcaAc11B.1.5250.000113
S20T20NaCcaAc11B.1.5330.009615
S20T20NaCcaAc11B.1.5770.000687
S20T20NaCcaAc11B.1.6090.000479
S20T20NaCcaAc11B.1.6200.000946
S20T20NaCcaAc11B.1.6230.000536
S20T20NaCcaAc11B.110.005128
S20T20NaCcaAc11B.30.000831
S20T20NaCcaAc11C.160.00106
S20T20NaCcaAc11C.350.000774
S20T20NaCcaAc11P.70.004367
S20T20NaCcaAc11Q.30.000145
S20T20NaCcaAc11Q.40.000455