CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
S | 20 | T20I | nonsyn | aCc | aTc | 10994 | 10947 | 0.995725 | 21620-21622 | |
S | 20 | T20I | nonsyn | aCC | aTT | 10994 | 44 | 0.00400218 | 21620-21622 | |
S | 20 | T20I | nonsyn | aCC | aTA | 10994 | 3 | 0.000272876 | 21620-21622 |
Details of the mutation T20I within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
S | 20 | T20I | aCc | aTc | 10947 | 10994 | All | 0.002094 |
S | 20 | T20I | aCC | aTT | 44 | 10994 | All | 0.000008 |
S | 20 | T20I | aCC | aTA | 3 | 10994 | All | 0.000001 |
S | 20 | T20I | aCc | aTc | 3033 | 3045 | B.1.1.7 | 0.002715 |
S | 20 | T20I | aCC | aTT | 12 | 3045 | B.1.1.7 | 0.000011 |
S | 20 | T20I | aCc | aTc | 1920 | 1923 | B.1.1.176 | 0.843585 |
S | 20 | T20I | aCC | aTT | 3 | 1923 | B.1.1.176 | 0.001318 |
S | 20 | T20I | aCc | aTc | 1068 | 1071 | B.1.588 | 0.971793 |
S | 20 | T20I | aCC | aTA | 3 | 1071 | B.1.588 | 0.00273 |
S | 20 | T20I | aCc | aTc | 623 | 624 | AY.103 | 0.003868 |
S | 20 | T20I | aCC | aTT | 1 | 624 | AY.103 | 0.000006 |
S | 20 | T20I | aCc | aTc | 520 | 521 | AY.4 | 0.000809 |
S | 20 | T20I | aCC | aTT | 1 | 521 | AY.4 | 0.000002 |
S | 20 | T20I | aCc | aTc | 375 | 376 | B.1.160 | 0.011695 |
S | 20 | T20I | aCC | aTT | 1 | 376 | B.1.160 | 0.000031 |
S | 20 | T20I | aCc | aTc | 374 | 375 | B.1.2 | 0.003293 |
S | 20 | T20I | aCC | aTT | 1 | 375 | B.1.2 | 0.000009 |
S | 20 | T20I | aCc | aTc | 314 | 317 | B.1.617.2 | 0.001182 |
S | 20 | T20I | aCC | aTT | 3 | 317 | B.1.617.2 | 0.000011 |
S | 20 | T20I | aCc | aTc | 221 | 221 | AY.80 | 0.249436 |
S | 20 | T20I | aCc | aTc | 204 | 204 | B.1 | 0.001869 |
S | 20 | T20I | aCc | aTc | 191 | 191 | AY.43 | 0.000846 |
S | 20 | T20I | aCc | aTc | 126 | 127 | B.1.1.519 | 0.005004 |
S | 20 | T20I | aCC | aTT | 1 | 127 | B.1.1.519 | 0.00004 |
S | 20 | T20I | aCc | aTc | 122 | 122 | AY.25 | 0.000734 |
S | 20 | T20I | aCc | aTc | 98 | 98 | AP.1 | 0.147147 |
S | 20 | T20I | aCc | aTc | 91 | 91 | AY.46 | 0.009471 |
S | 20 | T20I | aCc | aTc | 77 | 85 | C.23 | 0.447674 |
S | 20 | T20I | aCC | aTT | 8 | 85 | C.23 | 0.046512 |
S | 20 | T20I | aCc | aTc | 84 | 84 | AY.44 | 0.000511 |
S | 20 | T20I | aCc | aTc | 65 | 65 | B.1.619.1 | 0.041693 |
S | 20 | T20I | aCc | aTc | 63 | 63 | C.37 | 0.007312 |
S | 20 | T20I | aCc | aTc | 50 | 50 | B.1.595 | 0.013048 |
S | 20 | T20I | aCc | aTc | 49 | 49 | B.1.596 | 0.00427 |
S | 20 | T20I | aCc | aTc | 43 | 43 | AY.4.2 | 0.000933 |
S | 20 | T20I | aCc | aTc | 41 | 41 | AY.29 | 0.000647 |
S | 20 | T20I | aCc | aTc | 41 | 41 | B.1.177 | 0.00054 |
S | 20 | T20I | aCc | aTc | 40 | 40 | B.1.526 | 0.00094 |
S | 20 | T20I | aCc | aTc | 39 | 39 | B.1.429 | 0.000918 |
S | 20 | T20I | aCc | aTc | 37 | 37 | AY.118 | 0.002318 |
S | 20 | T20I | aCc | aTc | 34 | 34 | AY.102 | 0.000901 |
S | 20 | T20I | aCc | aTc | 34 | 34 | B.1.1 | 0.000617 |
S | 20 | T20I | aCc | aTc | 31 | 31 | AY.3.1 | 0.002643 |
S | 20 | T20I | aCc | aTc | 28 | 28 | AY.71 | 0.013302 |
S | 20 | T20I | aCc | aTc | 26 | 26 | AY.39 | 0.000642 |
S | 20 | T20I | aCc | aTc | 26 | 26 | B.1.588.1 | 1 |
S | 20 | T20I | aCc | aTc | 24 | 24 | AY.88 | 0.02122 |
S | 20 | T20I | aCc | aTc | 24 | 24 | B.1.575 | 0.007282 |
S | 20 | T20I | aCc | aTc | 21 | 21 | AY.26 | 0.000595 |
S | 20 | T20I | aCc | aTc | 21 | 21 | AY.3 | 0.000209 |
S | 20 | T20I | aCc | aTc | 20 | 20 | B.1.1.122 | 0.909091 |
S | 20 | T20I | aCc | aTc | 20 | 20 | B.1.1.284 | 0.002148 |
S | 20 | T20I | aCc | aTc | 20 | 20 | B.1.258 | 0.001331 |
S | 20 | T20I | aCc | aTc | 19 | 19 | AY.20 | 0.000738 |
S | 20 | T20I | aCc | aTc | 18 | 18 | AY.47 | 0.00056 |
S | 20 | T20I | aCc | aTc | 17 | 17 | AY.120 | 0.000632 |
S | 20 | T20I | aCc | aTc | 17 | 17 | B.1.1.28 | 0.005291 |
S | 20 | T20I | aCc | aTc | 17 | 17 | B.1.258.17 | 0.001768 |
S | 20 | T20I | aCc | aTc | 15 | 15 | AY.100 | 0.00069 |
S | 20 | T20I | aCc | aTc | 14 | 14 | AY.46.5 | 0.002778 |
S | 20 | T20I | aCc | aTc | 14 | 14 | B.1.36 | 0.002043 |
S | 20 | T20I | aCc | aTc | 13 | 13 | B.1.1.201 | 0.317073 |
S | 20 | T20I | aCc | aTc | 13 | 13 | B.1.221 | 0.000923 |
S | 20 | T20I | aCc | aTc | 13 | 13 | B.1.509 | 0.011255 |
S | 20 | T20I | aCc | aTc | 12 | 12 | AY.23 | 0.000837 |
S | 20 | T20I | aCc | aTc | 12 | 12 | AY.33 | 0.000801 |
S | 20 | T20I | aCc | aTc | 11 | 12 | C.36.3 | 0.006239 |
S | 20 | T20I | aCC | aTT | 1 | 12 | C.36.3 | 0.000567 |
S | 20 | T20I | aCc | aTc | 12 | 12 | Q.2 | 0.007362 |
S | 20 | T20I | aCc | aTc | 11 | 11 | B.1.111 | 0.012926 |
S | 20 | T20I | aCc | aTc | 10 | 10 | AY.5 | 0.000206 |
S | 20 | T20I | aCc | aTc | 10 | 10 | B.1.351 | 0.000297 |
S | 20 | T20I | aCc | aTc | 10 | 10 | Q.8 | 0.001649 |
S | 20 | T20I | aCc | aTc | 9 | 9 | AY.42 | 0.000362 |
S | 20 | T20I | aCc | aTc | 9 | 9 | AY.6 | 0.00037 |
S | 20 | T20I | aCc | aTc | 9 | 9 | B.1.1.174 | 0.030405 |
S | 20 | T20I | aCc | aTc | 9 | 9 | B.1.567 | 0.03 |
S | 20 | T20I | aCc | aTc | 8 | 8 | AY.46.6 | 0.000578 |
S | 20 | T20I | aCC | aTT | 8 | 8 | AY.75 | 0.000448 |
S | 20 | T20I | aCc | aTc | 8 | 8 | B.1.1.214 | 0.000444 |
S | 20 | T20I | aCc | aTc | 8 | 8 | B.1.1.33 | 0.003367 |
S | 20 | T20I | aCc | aTc | 8 | 8 | B.1.177.60 | 0.001747 |
S | 20 | T20I | aCc | aTc | 7 | 7 | AY.46.4 | 0.001152 |
S | 20 | T20I | aCc | aTc | 6 | 7 | B.1.1.306 | 0.00263 |
S | 20 | T20I | aCC | aTT | 1 | 7 | B.1.1.306 | 0.000438 |
S | 20 | T20I | aCc | aTc | 7 | 7 | B.1.177.21 | 0.000535 |
S | 20 | T20I | aCc | aTc | 7 | 7 | B.1.525 | 0.000792 |
S | 20 | T20I | aCc | aTc | 7 | 7 | B.1.561 | 0.002779 |
S | 20 | T20I | aCc | aTc | 6 | 6 | AS.1 | 0.057143 |
S | 20 | T20I | aCc | aTc | 6 | 6 | AY.113 | 0.000854 |
S | 20 | T20I | aCc | aTc | 6 | 6 | AY.39.1 | 0.000238 |
S | 20 | T20I | aCc | aTc | 6 | 6 | AY.73 | 0.003992 |
S | 20 | T20I | aCc | aTc | 6 | 6 | AY.9.1 | 0.000502 |
S | 20 | T20I | aCc | aTc | 5 | 6 | B.1.1.1 | 0.001633 |
S | 20 | T20I | aCC | aTT | 1 | 6 | B.1.1.1 | 0.000327 |
S | 20 | T20I | aCc | aTc | 6 | 6 | B.1.243 | 0.000418 |
S | 20 | T20I | aCc | aTc | 6 | 6 | B.1.351.2 | 0.001815 |
S | 20 | T20I | aCc | aTc | 6 | 6 | B.1.427 | 0.000303 |
S | 20 | T20I | aCc | aTc | 5 | 5 | AY.45 | 0.000608 |
S | 20 | T20I | aCc | aTc | 5 | 5 | AY.54 | 0.000477 |
S | 20 | T20I | aCc | aTc | 5 | 5 | AY.83 | 0.008621 |
S | 20 | T20I | aCc | aTc | 5 | 5 | B.1.1.37 | 0.000964 |
S | 20 | T20I | aCc | aTc | 5 | 5 | B.1.177.4 | 0.001055 |
S | 20 | T20I | aCc | aTc | 5 | 5 | B.1.234 | 0.00066 |
S | 20 | T20I | aCc | aTc | 5 | 5 | B.1.240 | 0.001078 |
S | 20 | T20I | aCc | aTc | 5 | 5 | Q.1 | 0.000632 |
S | 20 | T20I | aCc | aTc | 5 | 5 | R.1 | 0.00045 |
S | 20 | T20I | aCc | aTc | 4 | 4 | AY.7.1 | 0.000451 |
S | 20 | T20I | aCc | aTc | 4 | 4 | AY.98 | 0.000316 |
S | 20 | T20I | aCc | aTc | 4 | 4 | B.1.1.216 | 0.003562 |
S | 20 | T20I | aCc | aTc | 4 | 4 | B.1.1.220 | 0.007435 |
S | 20 | T20I | aCc | aTc | 4 | 4 | B.1.369 | 0.001141 |
S | 20 | T20I | aCc | aTc | 4 | 4 | B.1.396 | 0.002823 |
S | 20 | T20I | aCc | aTc | 4 | 4 | B.1.448 | 0.010499 |
S | 20 | T20I | aCc | aTc | 4 | 4 | B.1.621 | 0.000354 |
S | 20 | T20I | aCc | aTc | 4 | 4 | P.2 | 0.000747 |
S | 20 | T20I | aCc | aTc | 4 | 4 | Q.4 | 0.001819 |
S | 20 | T20I | aCc | aTc | 4 | 4 | W.2 | 0.019324 |
S | 20 | T20I | aCc | aTc | 3 | 3 | AY.111 | 0.000549 |
S | 20 | T20I | aCc | aTc | 3 | 3 | AY.29.1 | 0.000662 |
S | 20 | T20I | aCc | aTc | 3 | 3 | AY.7 | 0.000588 |
S | 20 | T20I | aCc | aTc | 3 | 3 | AY.9 | 0.000203 |
S | 20 | T20I | aCc | aTc | 3 | 3 | B.1.1.222 | 0.000612 |
S | 20 | T20I | aCc | aTc | 3 | 3 | B.1.195 | 0.015075 |
S | 20 | T20I | aCc | aTc | 3 | 3 | B.1.214.2 | 0.001799 |
S | 20 | T20I | aCc | aTc | 3 | 3 | B.1.241 | 0.002435 |
S | 20 | T20I | aCc | aTc | 3 | 3 | B.1.258.3 | 0.005025 |
S | 20 | T20I | aCc | aTc | 3 | 3 | B.1.36.31 | 0.005254 |
S | 20 | T20I | aCc | aTc | 3 | 3 | B.1.582 | 0.001472 |
S | 20 | T20I | aCc | aTc | 3 | 3 | B.1.609 | 0.001438 |
S | 20 | T20I | aCc | aTc | 3 | 3 | B.1.637 | 0.000219 |
S | 20 | T20I | aCc | aTc | 3 | 3 | D.2 | 0.000225 |
S | 20 | T20I | aCc | aTc | 2 | 2 | AY.10 | 0.00106 |
S | 20 | T20I | aCc | aTc | 2 | 2 | AY.101 | 0.000981 |
S | 20 | T20I | aCc | aTc | 2 | 2 | AY.114 | 0.000462 |
S | 20 | T20I | aCc | aTc | 2 | 2 | AY.116.1 | 0.000623 |
S | 20 | T20I | aCc | aTc | 2 | 2 | AY.119 | 0.000071 |
S | 20 | T20I | aCc | aTc | 2 | 2 | AY.121 | 0.000271 |
S | 20 | T20I | aCc | aTc | 2 | 2 | AY.27 | 0.000129 |
S | 20 | T20I | aCc | aTc | 2 | 2 | AY.35 | 0.000466 |
S | 20 | T20I | aCc | aTc | 2 | 2 | AY.40 | 0.001929 |
S | 20 | T20I | aCc | aTc | 2 | 2 | AY.61 | 0.00021 |
S | 20 | T20I | aCc | aTc | 2 | 2 | AY.69 | 0.000373 |
S | 20 | T20I | aCC | aTT | 1 | 2 | AY.75.1 | 0.00018 |
S | 20 | T20I | aCc | aTc | 1 | 2 | AY.75.1 | 0.00018 |
S | 20 | T20I | aCc | aTc | 2 | 2 | AY.84 | 0.000875 |
S | 20 | T20I | aCc | aTc | 2 | 2 | AY.9.2 | 0.000073 |
S | 20 | T20I | aCc | aTc | 2 | 2 | AY.95 | 0.001522 |
S | 20 | T20I | aCc | aTc | 2 | 2 | AY.98.1 | 0.000097 |
S | 20 | T20I | aCc | aTc | 2 | 2 | B.1.1.161 | 0.007067 |
S | 20 | T20I | aCc | aTc | 2 | 2 | B.1.1.207 | 0.002364 |
S | 20 | T20I | aCc | aTc | 2 | 2 | B.1.1.326 | 0.003521 |
S | 20 | T20I | aCc | aTc | 2 | 2 | B.1.1.389 | 0.012121 |
S | 20 | T20I | aCc | aTc | 2 | 2 | B.1.1.39 | 0.001019 |
S | 20 | T20I | aCc | aTc | 2 | 2 | B.1.1.466 | 0.017391 |
S | 20 | T20I | aCc | aTc | 2 | 2 | B.1.1.70 | 0.000682 |
S | 20 | T20I | aCc | aTc | 2 | 2 | B.1.103 | 0.038462 |
S | 20 | T20I | aCc | aTc | 2 | 2 | B.1.177.2 | 0.009091 |
S | 20 | T20I | aCc | aTc | 2 | 2 | B.1.177.35 | 0.001382 |
S | 20 | T20I | aCc | aTc | 2 | 2 | B.1.177.58 | 0.002663 |
S | 20 | T20I | aCc | aTc | 2 | 2 | B.1.177.7 | 0.00033 |
S | 20 | T20I | aCc | aTc | 2 | 2 | B.1.177.75 | 0.002081 |
S | 20 | T20I | aCc | aTc | 2 | 2 | B.1.177.82 | 0.000955 |
S | 20 | T20I | aCc | aTc | 2 | 2 | B.1.210 | 0.004264 |
S | 20 | T20I | aCc | aTc | 2 | 2 | B.1.221.4 | 0.008333 |
S | 20 | T20I | aCc | aTc | 2 | 2 | B.1.258.4 | 0.006897 |
S | 20 | T20I | aCc | aTc | 2 | 2 | B.1.36.10 | 0.009569 |
S | 20 | T20I | aCc | aTc | 2 | 2 | B.1.551 | 0.002581 |
S | 20 | T20I | aCc | aTc | 2 | 2 | B.1.621.1 | 0.001012 |
S | 20 | T20I | aCc | aTc | 2 | 2 | P.1.1 | 0.000635 |
S | 20 | T20I | aCc | aTc | 1 | 1 | A.23.1 | 0.000704 |
S | 20 | T20I | aCc | aTc | 1 | 1 | A.4 | 0.012821 |
S | 20 | T20I | aCc | aTc | 1 | 1 | AE.8 | 0.000489 |
S | 20 | T20I | aCc | aTc | 1 | 1 | AY.104 | 0.001984 |
S | 20 | T20I | aCc | aTc | 1 | 1 | AY.120.2.1 | 0.000498 |
S | 20 | T20I | aCc | aTc | 1 | 1 | AY.14 | 0.000088 |
S | 20 | T20I | aCc | aTc | 1 | 1 | AY.16 | 0.00038 |
S | 20 | T20I | aCc | aTc | 1 | 1 | AY.32 | 0.000532 |
S | 20 | T20I | aCc | aTc | 1 | 1 | AY.34 | 0.000097 |
S | 20 | T20I | aCc | aTc | 1 | 1 | AY.36 | 0.000148 |
S | 20 | T20I | aCc | aTc | 1 | 1 | AY.39.2 | 0.001541 |
S | 20 | T20I | aCc | aTc | 1 | 1 | AY.4.4 | 0.000409 |
S | 20 | T20I | aCc | aTc | 1 | 1 | AY.46.1 | 0.001027 |
S | 20 | T20I | aCc | aTc | 1 | 1 | AY.5.3 | 0.000337 |
S | 20 | T20I | aCC | aTT | 1 | 1 | AY.51 | 0.000909 |
S | 20 | T20I | aCc | aTc | 1 | 1 | AY.56 | 0.001605 |
S | 20 | T20I | aCc | aTc | 1 | 1 | AY.57 | 0.000656 |
S | 20 | T20I | aCc | aTc | 1 | 1 | AY.70 | 0.000209 |
S | 20 | T20I | aCc | aTc | 1 | 1 | AY.72 | 0.001361 |
S | 20 | T20I | aCc | aTc | 1 | 1 | AY.74 | 0.000116 |
S | 20 | T20I | aCc | aTc | 1 | 1 | AY.79 | 0.001211 |
S | 20 | T20I | aCc | aTc | 1 | 1 | AY.82 | 0.001357 |
S | 20 | T20I | aCc | aTc | 1 | 1 | AY.86 | 0.00083 |
S | 20 | T20I | aCc | aTc | 1 | 1 | AY.87 | 0.000833 |
S | 20 | T20I | aCc | aTc | 1 | 1 | AY.91 | 0.00073 |
S | 20 | T20I | aCc | aTc | 1 | 1 | AY.92 | 0.000287 |
S | 20 | T20I | aCc | aTc | 1 | 1 | AY.97 | 0.001701 |
S | 20 | T20I | aCc | aTc | 1 | 1 | AY.99.2 | 0.000092 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B | 0.000128 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.1.10 | 0.001115 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.1.153 | 0.001095 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.1.172 | 0.018182 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.1.177 | 0.019231 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.1.198 | 0.001468 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.1.228 | 0.003049 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.1.232 | 0.001815 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.1.268 | 0.014925 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.1.277 | 0.000759 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.1.289 | 0.002083 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.1.291 | 0.000742 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.1.301 | 0.001179 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.1.304 | 0.002809 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.1.311 | 0.000358 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.1.317 | 0.000412 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.1.347 | 0.018182 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.1.386 | 0.066667 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.1.396 | 0.045455 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.1.398 | 0.003226 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.1.402 | 0.011111 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.1.411 | 0.014706 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.127 | 0.002198 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.160.28 | 0.002924 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.177.12 | 0.000152 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.177.16 | 0.000664 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.177.18 | 0.00116 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.177.41 | 0.0025 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.177.73 | 0.000566 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.177.80 | 0.001912 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.177.81 | 0.000189 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.178 | 0.02381 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.223 | 0.002778 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.239 | 0.001221 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.293 | 0.0125 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.311 | 0.000275 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.320 | 0.001245 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.351.3 | 0.000876 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.36.18 | 0.00042 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.36.2 | 0.010753 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.36.27 | 0.000763 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.36.29 | 0.000517 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.36.8 | 0.001 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.366 | 0.004878 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.377 | 0.004566 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.404 | 0.001302 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.422 | 0.000812 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.470 | 0.001404 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.507 | 0.011236 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.541 | 0.004425 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.544 | 0.006024 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.577 | 0.000687 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.617.1 | 0.000129 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.623 | 0.000536 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.625 | 0.002353 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.628 | 0.000352 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.630 | 0.005236 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.1.631 | 0.003367 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.23 | 0.002924 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.3.1 | 0.001658 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.34 | 0.013699 |
S | 20 | T20I | aCc | aTc | 1 | 1 | B.4.1 | 0.018868 |
S | 20 | T20I | aCc | aTc | 1 | 1 | C.1.2 | 0.004255 |
S | 20 | T20I | aCc | aTc | 1 | 1 | C.35 | 0.000774 |
S | 20 | T20I | aCc | aTc | 1 | 1 | P.1 | 0.000016 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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