CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = T20A

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S20T20AnonsynAccGcc3233220.99690421620-21622
S20T20AnonsynAcCGcT32310.0030959821620-21622

Details of the mutation T20A within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S20T20AAccGcc322323All0.000062
S20T20AAcCGcT1323All0
S20T20AAccGcc220221AY.470.006843
S20T20AAcCGcT1221AY.470.000031
S20T20AAccGcc2626AY.290.00041
S20T20AAccGcc1414B.1.1.70.000013
S20T20AAccGcc1414B.1.617.20.000053
S20T20AAccGcc66AY.40.000009
S20T20AAccGcc66AY.430.000027
S20T20AAccGcc44AY.1030.000025
S20T20AAccGcc33AY.1000.000138
S20T20AAccGcc33AY.30.00003
S20T20AAccGcc33B.10.000027
S20T20AAccGcc33B.1.10.000054
S20T20AAccGcc22B.1.1600.000062
S20T20AAccGcc11AY.1170.000085
S20T20AAccGcc11AY.4.20.000022
S20T20AAccGcc11AY.440.000006
S20T20AAccGcc11AY.600.000938
S20T20AAccGcc11AY.75.10.00018
S20T20AAccGcc11AY.950.000761
S20T20AAccGcc11AY.980.000079
S20T20AAccGcc11AY.98.10.000048
S20T20AAccGcc11B0.000128
S20T20AAccGcc11B.1.1.2840.000107
S20T20AAccGcc11B.1.1770.000013
S20T20AAccGcc11B.1.177.540.000606
S20T20AAccGcc11B.1.3510.00003
S20T20AAccGcc11B.1.4090.000781
S20T20AAccGcc11B.1.4330.003195
S20T20AAccGcc11B.1.6230.000536
S20T20AAccGcc11B.40.002208
S20T20AAccGcc11B.6.60.000889