CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = S : Mut = T19del1

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
S19T19del1delaCaa-a1270.58333321617-21619
S19T19del1delacAac-1250.41666721617-21619

Details of the mutation T19del1 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
S19T19del1aCaa-a712All0.000001
S19T19del1acAac-512All0.000001
S19T19del1acAac-33B.1.1.70.000003
S19T19del1aCaa-a22B.10.000018
S19T19del1aCaa-a22B.1.617.10.000258
S19T19del1acAac-11B.1.20.000009
S19T19del1aCaa-a11B.1.360.000146
S19T19del1aCaa-a11B.1.36.290.000517
S19T19del1acAac-11B.1.5250.000113
S19T19del1aCaa-a11B.1.617.20.000004